RNA–Protein interactions for RNA: ENST00000521401.1

HOXA3-204, Transcript of homeobox A3, humanhuman

TSL 3

Gene HOXA3, Length 598 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-204ENST00000521401 CCDC39Q9UFE4 941 aa23.56■■□□□ 1.36
HOXA3-204ENST00000521401 NR2E1Q9Y466 385 aa23.56■■□□□ 1.36
HOXA3-204ENST00000521401 A0A087X0B3 334 aa23.55■■□□□ 1.36
HOXA3-204ENST00000521401 K7ENM7 598 aa23.55■■□□□ 1.36
HOXA3-204ENST00000521401 RFPL2O75678 378 aa23.55■■□□□ 1.36
HOXA3-204ENST00000521401 SPATA31D3P0C874 917 aa23.55■■□□□ 1.36
HOXA3-204ENST00000521401 NMT1P30419 496 aaKnown RBP23.55■■□□□ 1.36
HOXA3-204ENST00000521401 GTF2BQ00403 316 aa23.55■■□□□ 1.36
HOXA3-204ENST00000521401 CREMQ03060 361 aa23.55■■□□□ 1.36
HOXA3-204ENST00000521401 RRAGBQ5VZM2 374 aa23.55■■□□□ 1.36
HOXA3-204ENST00000521401 SPATA31D4Q6ZUB0 917 aa23.55■■□□□ 1.36
HOXA3-204ENST00000521401 TSHZ2Q9NRE2 1034 aa23.55■■□□□ 1.36
HOXA3-204ENST00000521401 ADAM12O43184 909 aa23.54■■□□□ 1.36
HOXA3-204ENST00000521401 FAM189A1O60320 539 aa23.54■■□□□ 1.36
HOXA3-204ENST00000521401 TBCAO75347 108 aaKnown RBP23.54■■□□□ 1.36
HOXA3-204ENST00000521401 SCP2P22307 547 aa23.54■■□□□ 1.36
HOXA3-204ENST00000521401 BRCC3P46736 316 aa23.54■■□□□ 1.36
HOXA3-204ENST00000521401 ZXDAP98168 799 aa23.54■■□□□ 1.36
HOXA3-204ENST00000521401 PSMD5Q16401 504 aa23.54■■□□□ 1.36
HOXA3-204ENST00000521401 SLC39A4Q6P5W5 647 aa23.54■■□□□ 1.36
HOXA3-204ENST00000521401 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.54■■□□□ 1.36
HOXA3-204ENST00000521401 C18orf25Q96B23 403 aaPredicted RBP23.54■■□□□ 1.36
HOXA3-204ENST00000521401 ZNF707Q96C28 371 aaPredicted RBP23.54■■□□□ 1.36
HOXA3-204ENST00000521401 DDX27Q96GQ7 796 aaKnown RBP23.54■■□□□ 1.36
HOXA3-204ENST00000521401 RHOBTB2Q9BYZ6 727 aa23.54■■□□□ 1.36
HOXA3-204ENST00000521401 ZHX3Q9H4I2 956 aa23.54■■□□□ 1.36
HOXA3-204ENST00000521401 PLEKHA4Q9H4M7 779 aa23.54■■□□□ 1.36
HOXA3-204ENST00000521401 SLC38A7Q9NVC3 462 aa23.54■■□□□ 1.36
HOXA3-204ENST00000521401 CCDC195A0A1B0GUA6 201 aa23.53■■□□□ 1.36
HOXA3-204ENST00000521401 MYMKA6NI61 221 aa23.53■■□□□ 1.36
HOXA3-204ENST00000521401 SPDYE4A6NLX3 237 aa23.53■■□□□ 1.36
HOXA3-204ENST00000521401 PODXLO00592 558 aa23.53■■□□□ 1.36
HOXA3-204ENST00000521401 LIG4P49917 911 aa23.53■■□□□ 1.36
HOXA3-204ENST00000521401 ZBTB41Q5SVQ8 909 aa23.53■■□□□ 1.36
HOXA3-204ENST00000521401 DYMQ7RTS9 669 aa23.53■■□□□ 1.36
HOXA3-204ENST00000521401 MAP4K3Q8IVH8 894 aa23.53■■□□□ 1.36
HOXA3-204ENST00000521401 DDX12PQ92771 950 aa23.53■■□□□ 1.36
HOXA3-204ENST00000521401 DNAJC19Q96DA6 116 aa23.53■■□□□ 1.36
HOXA3-204ENST00000521401 BICD1Q96G01 975 aa23.53■■□□□ 1.36
HOXA3-204ENST00000521401 ST6GALNAC4Q9H4F1 302 aa23.53■■□□□ 1.36
HOXA3-204ENST00000521401 TFIP11Q9UBB9 837 aaKnown RBP23.53■■□□□ 1.36
HOXA3-204ENST00000521401 DPP7Q9UHL4 492 aa23.53■■□□□ 1.36
HOXA3-204ENST00000521401 USTQ9Y2C2 406 aa23.53■■□□□ 1.36
HOXA3-204ENST00000521401 I3L4J1 428 aa23.52■■□□□ 1.36
HOXA3-204ENST00000521401 CLTAP09496 248 aa23.52■■□□□ 1.36
HOXA3-204ENST00000521401 CXCL8P10145 99 aa23.52■■□□□ 1.36
HOXA3-204ENST00000521401 TXLNAP40222 546 aa23.52■■□□□ 1.36
HOXA3-204ENST00000521401 TNFSF9P41273 254 aa23.52■■□□□ 1.36
HOXA3-204ENST00000521401 STK38Q15208 465 aa23.52■■□□□ 1.36
HOXA3-204ENST00000521401 PTPN21Q16825 1174 aa23.52■■□□□ 1.36
HOXA3-204ENST00000521401 ZC2HC1CQ53FD0 456 aaPredicted RBP23.52■■□□□ 1.36
HOXA3-204ENST00000521401 RSPO2Q6UXX9 243 aaPredicted RBP23.52■■□□□ 1.36
HOXA3-204ENST00000521401 ZDHHC14Q8IZN3 488 aa23.52■■□□□ 1.36
HOXA3-204ENST00000521401 TMEM130Q8N3G9 435 aa23.52■■□□□ 1.36
HOXA3-204ENST00000521401 KREMEN2Q8NCW0 462 aa23.52■■□□□ 1.36
HOXA3-204ENST00000521401 PANK2Q9BZ23 570 aa23.52■■□□□ 1.36
HOXA3-204ENST00000521401 PLEKHA5Q9HAU0 1116 aa23.52■■□□□ 1.36
HOXA3-204ENST00000521401 FBXW11Q9UKB1 542 aa23.52■■□□□ 1.36
HOXA3-204ENST00000521401 TTC26A0AVF1 554 aa23.51■■□□□ 1.35
HOXA3-204ENST00000521401 HNRNPDLO14979 420 aaKnown RBP23.51■■□□□ 1.35
HOXA3-204ENST00000521401 PPP6R2O75170 966 aa23.51■■□□□ 1.35
HOXA3-204ENST00000521401 TKTP29401 623 aaKnown RBP23.51■■□□□ 1.35
HOXA3-204ENST00000521401 RPL9P32969 192 aaKnown RBP23.51■■□□□ 1.35
HOXA3-204ENST00000521401 MATR3P43243 847 aaKnown RBP eCLIP23.51■■□□□ 1.35
HOXA3-204ENST00000521401 FOXD4L5Q5VV16 416 aaPredicted RBP23.51■■□□□ 1.35
HOXA3-204ENST00000521401 CYP26C1Q6V0L0 522 aa23.51■■□□□ 1.35
HOXA3-204ENST00000521401 CCDC73Q6ZRK6 1079 aa23.51■■□□□ 1.35
HOXA3-204ENST00000521401 TRIM67Q6ZTA4 783 aa23.51■■□□□ 1.35
HOXA3-204ENST00000521401 CCDC149Q6ZUS6 474 aa23.51■■□□□ 1.35
HOXA3-204ENST00000521401 SV2BQ7L1I2 683 aa23.51■■□□□ 1.35
HOXA3-204ENST00000521401 ZNF720Q7Z2F6 126 aa23.51■■□□□ 1.35
HOXA3-204ENST00000521401 SFR1Q86XK3 245 aa23.51■■□□□ 1.35
HOXA3-204ENST00000521401 TDRD5Q8NAT2 981 aaKnown RBP23.51■■□□□ 1.35
HOXA3-204ENST00000521401 FOXD4L4Q8WXT5 416 aaPredicted RBP23.51■■□□□ 1.35
HOXA3-204ENST00000521401 STRA6Q9BX79 667 aa23.51■■□□□ 1.35
HOXA3-204ENST00000521401 MTRRQ9UBK8 725 aa23.51■■□□□ 1.35
HOXA3-204ENST00000521401 PLXNA3P51805 1871 aa23.5■■□□□ 1.35
HOXA3-204ENST00000521401 A0A0B4J269 797 aa23.5■■□□□ 1.35
HOXA3-204ENST00000521401 ANKRD63C9JTQ0 380 aa23.5■■□□□ 1.35
HOXA3-204ENST00000521401 SPTLC2O15270 562 aa23.5■■□□□ 1.35
HOXA3-204ENST00000521401 PPP1R37O75864 691 aa23.5■■□□□ 1.35
HOXA3-204ENST00000521401 ADRB2P07550 413 aa23.5■■□□□ 1.35
HOXA3-204ENST00000521401 SPAG1Q07617 926 aa23.5■■□□□ 1.35
HOXA3-204ENST00000521401 ZBTB6Q15916 424 aa23.5■■□□□ 1.35
HOXA3-204ENST00000521401 PDXDC1Q6P996 788 aa23.5■■□□□ 1.35
HOXA3-204ENST00000521401 ELMSAN1Q6PJG2 1045 aa23.5■■□□□ 1.35
HOXA3-204ENST00000521401 HFE2Q6ZVN8 426 aa23.5■■□□□ 1.35
HOXA3-204ENST00000521401 ZNF396Q96N95 335 aaPredicted RBP23.5■■□□□ 1.35
HOXA3-204ENST00000521401 WDR6Q9NNW5 1121 aaKnown RBP23.5■■□□□ 1.35
HOXA3-204ENST00000521401 ZDHHC7Q9NXF8 308 aa23.5■■□□□ 1.35
HOXA3-204ENST00000521401 TUBGCP4Q9UGJ1 667 aa23.5■■□□□ 1.35
HOXA3-204ENST00000521401 TISP43B9A030 160 aa23.49■■□□□ 1.35
HOXA3-204ENST00000521401 OGTO15294 1046 aa23.49■■□□□ 1.35
HOXA3-204ENST00000521401 TRAPPC3O43617 180 aa23.49■■□□□ 1.35
HOXA3-204ENST00000521401 ZMYND10O75800 440 aa23.49■■□□□ 1.35
HOXA3-204ENST00000521401 YEATS4O95619 227 aa23.49■■□□□ 1.35
HOXA3-204ENST00000521401 ZSCAN22P10073 491 aaPredicted RBP23.49■■□□□ 1.35
HOXA3-204ENST00000521401 STAT6P42226 847 aa23.49■■□□□ 1.35
HOXA3-204ENST00000521401 PKP1Q13835 747 aa23.49■■□□□ 1.35
HOXA3-204ENST00000521401 RAB33AQ14088 237 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms