RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 TSHZ2Q9NRE2 1034 aa18.65■□□□□ 0.58
SQLE-205ENST00000521232 ANKFY1Q9P2R3 1169 aa18.65■□□□□ 0.58
SQLE-205ENST00000521232 STK17AQ9UEE5 414 aa18.65■□□□□ 0.58
SQLE-205ENST00000521232 TBX20Q9UMR3 447 aa18.65■□□□□ 0.58
SQLE-205ENST00000521232 GTF3C3Q9Y5Q9 886 aa18.65■□□□□ 0.58
SQLE-205ENST00000521232 CCDC195A0A1B0GUA6 201 aa18.64■□□□□ 0.57
SQLE-205ENST00000521232 C2CD4DB7Z1M9 353 aa18.64■□□□□ 0.57
SQLE-205ENST00000521232 PIGRP01833 764 aa18.64■□□□□ 0.57
SQLE-205ENST00000521232 KRT18P05783 430 aaKnown RBP18.64■□□□□ 0.57
SQLE-205ENST00000521232 RPL17P18621 184 aaKnown RBP18.64■□□□□ 0.57
SQLE-205ENST00000521232 FGFR3P22607 806 aa18.64■□□□□ 0.57
SQLE-205ENST00000521232 SP100P23497 879 aaPredicted RBP18.64■□□□□ 0.57
SQLE-205ENST00000521232 SOX4Q06945 474 aaPredicted RBP18.64■□□□□ 0.57
SQLE-205ENST00000521232 SLC10A6Q3KNW5 377 aa18.64■□□□□ 0.57
SQLE-205ENST00000521232 PDXDC1Q6P996 788 aa18.64■□□□□ 0.57
SQLE-205ENST00000521232 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.64■□□□□ 0.57
SQLE-205ENST00000521232 CEP57Q86XR8 500 aa18.64■□□□□ 0.57
SQLE-205ENST00000521232 ZDHHC14Q8IZN3 488 aa18.64■□□□□ 0.57
SQLE-205ENST00000521232 CLSTN3Q9BQT9 956 aa18.64■□□□□ 0.57
SQLE-205ENST00000521232 GOLGA2P5Q9HBQ8 144 aa18.64■□□□□ 0.57
SQLE-205ENST00000521232 DENND4AQ7Z401 1863 aa18.63■□□□□ 0.57
SQLE-205ENST00000521232 TRAPPC3O43617 180 aa18.63■□□□□ 0.57
SQLE-205ENST00000521232 SPATA31D3P0C874 917 aa18.63■□□□□ 0.57
SQLE-205ENST00000521232 HARSP12081 509 aaKnown RBP18.63■□□□□ 0.57
SQLE-205ENST00000521232 PDIA4P13667 645 aaKnown RBP18.63■□□□□ 0.57
SQLE-205ENST00000521232 ABCD1P33897 745 aa18.63■□□□□ 0.57
SQLE-205ENST00000521232 NASPP49321 788 aaPredicted RBP18.63■□□□□ 0.57
SQLE-205ENST00000521232 GTF2BQ00403 316 aa18.63■□□□□ 0.57
SQLE-205ENST00000521232 PSMD5Q16401 504 aa18.63■□□□□ 0.57
SQLE-205ENST00000521232 PTPN21Q16825 1174 aa18.63■□□□□ 0.57
SQLE-205ENST00000521232 SEZ6Q53EL9 994 aa18.63■□□□□ 0.57
SQLE-205ENST00000521232 RRAGBQ5VZM2 374 aa18.63■□□□□ 0.57
SQLE-205ENST00000521232 TRIM67Q6ZTA4 783 aa18.63■□□□□ 0.57
SQLE-205ENST00000521232 SPATA31D4Q6ZUB0 917 aa18.63■□□□□ 0.57
SQLE-205ENST00000521232 PLCD3Q8N3E9 789 aa18.63■□□□□ 0.57
SQLE-205ENST00000521232 KRI1Q8N9T8 703 aaKnown RBP18.63■□□□□ 0.57
SQLE-205ENST00000521232 C3orf58Q8NDZ4 430 aa18.63■□□□□ 0.57
SQLE-205ENST00000521232 PLEKHA5Q9HAU0 1116 aa18.63■□□□□ 0.57
SQLE-205ENST00000521232 ARIH1Q9Y4X5 557 aaPredicted RBP18.63■□□□□ 0.57
SQLE-205ENST00000521232 PDCD11Q14690 1871 aaKnown RBP18.63■□□□□ 0.57
SQLE-205ENST00000521232 K7ENM7 598 aa18.62■□□□□ 0.57
SQLE-205ENST00000521232 TBCAO75347 108 aaKnown RBP18.62■□□□□ 0.57
SQLE-205ENST00000521232 RFPL2O75678 378 aa18.62■□□□□ 0.57
SQLE-205ENST00000521232 CLTAP09496 248 aa18.62■□□□□ 0.57
SQLE-205ENST00000521232 RPL9P32969 192 aaKnown RBP18.62■□□□□ 0.57
SQLE-205ENST00000521232 TXLNAP40222 546 aa18.62■□□□□ 0.57
SQLE-205ENST00000521232 LIG4P49917 911 aa18.62■□□□□ 0.57
SQLE-205ENST00000521232 BMP8AQ7Z5Y6 402 aa18.62■□□□□ 0.57
SQLE-205ENST00000521232 GLYCTKQ8IVS8 523 aa18.62■□□□□ 0.57
SQLE-205ENST00000521232 HSCBQ8IWL3 235 aa18.62■□□□□ 0.57
SQLE-205ENST00000521232 LINC00301Q8NCQ3 95 aa18.62■□□□□ 0.57
SQLE-205ENST00000521232 KREMEN2Q8NCW0 462 aa18.62■□□□□ 0.57
SQLE-205ENST00000521232 BICD1Q96G01 975 aa18.62■□□□□ 0.57
SQLE-205ENST00000521232 ST6GALNAC4Q9H4F1 302 aa18.62■□□□□ 0.57
SQLE-205ENST00000521232 ZHX3Q9H4I2 956 aa18.62■□□□□ 0.57
SQLE-205ENST00000521232 ZDHHC7Q9NXF8 308 aa18.62■□□□□ 0.57
SQLE-205ENST00000521232 PODXLO00592 558 aa18.61■□□□□ 0.57
SQLE-205ENST00000521232 MYBP10242 640 aa18.61■□□□□ 0.57
SQLE-205ENST00000521232 NMT1P30419 496 aaKnown RBP18.61■□□□□ 0.57
SQLE-205ENST00000521232 MATR3P43243 847 aaKnown RBP eCLIP18.61■□□□□ 0.57
SQLE-205ENST00000521232 KYAT1Q16773 422 aa18.61■□□□□ 0.57
SQLE-205ENST00000521232 CCDC73Q6ZRK6 1079 aa18.61■□□□□ 0.57
SQLE-205ENST00000521232 CCDC149Q6ZUS6 474 aa18.61■□□□□ 0.57
SQLE-205ENST00000521232 HFE2Q6ZVN8 426 aa18.61■□□□□ 0.57
SQLE-205ENST00000521232 SV2BQ7L1I2 683 aa18.61■□□□□ 0.57
SQLE-205ENST00000521232 TDRD5Q8NAT2 981 aaKnown RBP18.61■□□□□ 0.57
SQLE-205ENST00000521232 DDX12PQ92771 950 aa18.61■□□□□ 0.57
SQLE-205ENST00000521232 C18orf25Q96B23 403 aaPredicted RBP18.61■□□□□ 0.57
SQLE-205ENST00000521232 ZNF707Q96C28 371 aaPredicted RBP18.61■□□□□ 0.57
SQLE-205ENST00000521232 WDR6Q9NNW5 1121 aaKnown RBP18.61■□□□□ 0.57
SQLE-205ENST00000521232 HCN4Q9Y3Q4 1203 aa18.61■□□□□ 0.57
SQLE-205ENST00000521232 WDFY4Q6ZS81 3184 aa18.61■□□□□ 0.57
SQLE-205ENST00000521232 MYH15Q9Y2K3 1946 aa18.61■□□□□ 0.57
SQLE-205ENST00000521232 TTC26A0AVF1 554 aa18.6■□□□□ 0.57
SQLE-205ENST00000521232 TMEM221A6NGB7 291 aa18.6■□□□□ 0.57
SQLE-205ENST00000521232 M0R296 226 aa18.6■□□□□ 0.57
SQLE-205ENST00000521232 HNRNPDLO14979 420 aaKnown RBP18.6■□□□□ 0.57
SQLE-205ENST00000521232 ADAM12O43184 909 aa18.6■□□□□ 0.57
SQLE-205ENST00000521232 FAM189A1O60320 539 aa18.6■□□□□ 0.57
SQLE-205ENST00000521232 ZMYND10O75800 440 aa18.6■□□□□ 0.57
SQLE-205ENST00000521232 BRCC3P46736 316 aa18.6■□□□□ 0.57
SQLE-205ENST00000521232 SIGLEC14Q08ET2 396 aa18.6■□□□□ 0.57
SQLE-205ENST00000521232 RAB33AQ14088 237 aa18.6■□□□□ 0.57
SQLE-205ENST00000521232 ZBTB6Q15916 424 aa18.6■□□□□ 0.57
SQLE-205ENST00000521232 OTOP3Q7RTS5 596 aa18.6■□□□□ 0.57
SQLE-205ENST00000521232 DYMQ7RTS9 669 aa18.6■□□□□ 0.57
SQLE-205ENST00000521232 ZNF720Q7Z2F6 126 aa18.6■□□□□ 0.57
SQLE-205ENST00000521232 MAP4K3Q8IVH8 894 aa18.6■□□□□ 0.57
SQLE-205ENST00000521232 ACSF2Q96CM8 615 aaPredicted RBP18.6■□□□□ 0.57
SQLE-205ENST00000521232 DNAJC19Q96DA6 116 aa18.6■□□□□ 0.57
SQLE-205ENST00000521232 ZNF396Q96N95 335 aaPredicted RBP18.6■□□□□ 0.57
SQLE-205ENST00000521232 PRKD2Q9BZL6 878 aa18.6■□□□□ 0.57
SQLE-205ENST00000521232 MTRRQ9UBK8 725 aa18.6■□□□□ 0.57
SQLE-205ENST00000521232 LIMD1Q9UGP4 676 aa18.6■□□□□ 0.57
SQLE-205ENST00000521232 FBXW11Q9UKB1 542 aa18.6■□□□□ 0.57
SQLE-205ENST00000521232 BACE2Q9Y5Z0 518 aa18.6■□□□□ 0.57
SQLE-205ENST00000521232 A0A0B4J269 797 aa18.59■□□□□ 0.57
SQLE-205ENST00000521232 MYMKA6NI61 221 aa18.59■□□□□ 0.57
SQLE-205ENST00000521232 I3L4J1 428 aa18.59■□□□□ 0.57
SQLE-205ENST00000521232 OGTO15294 1046 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms