RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 MAGOHP61326 146 aaKnown RBP10.84□□□□□ -0.67
MCF2-209ENST00000520602 ERVK-9P63128 1117 aa10.84□□□□□ -0.67
MCF2-209ENST00000520602 TREML2Q5T2D2 321 aa10.84□□□□□ -0.67
MCF2-209ENST00000520602 JAMLQ86YT9 394 aa10.84□□□□□ -0.67
MCF2-209ENST00000520602 KRT35Q92764 455 aa10.84□□□□□ -0.67
MCF2-209ENST00000520602 INPP4AQ96PE3 977 aaPredicted RBP10.84□□□□□ -0.67
MCF2-209ENST00000520602 SIX2Q9NPC8 291 aa10.84□□□□□ -0.67
MCF2-209ENST00000520602 UVRAGQ9P2Y5 699 aa10.84□□□□□ -0.67
MCF2-209ENST00000520602 A0A0A6YYK5 440 aaPredicted RBP10.83□□□□□ -0.68
MCF2-209ENST00000520602 SGK1O00141 431 aa10.83□□□□□ -0.68
MCF2-209ENST00000520602 ALDH5A1P51649 535 aaPredicted RBP10.83□□□□□ -0.68
MCF2-209ENST00000520602 OAZ1P54368 228 aa10.83□□□□□ -0.68
MCF2-209ENST00000520602 ZNF280AP59817 542 aaPredicted RBP10.83□□□□□ -0.68
MCF2-209ENST00000520602 ITIH3Q06033 890 aa10.83□□□□□ -0.68
MCF2-209ENST00000520602 HADHQ16836 314 aaKnown RBP10.83□□□□□ -0.68
MCF2-209ENST00000520602 GPC2Q8N158 579 aa10.83□□□□□ -0.68
MCF2-209ENST00000520602 TMC2Q8TDI7 906 aa10.83□□□□□ -0.68
MCF2-209ENST00000520602 SPIRE2Q8WWL2 714 aa10.83□□□□□ -0.68
MCF2-209ENST00000520602 SEMA4DQ92854 862 aa10.83□□□□□ -0.68
MCF2-209ENST00000520602 CALN1Q9BXU9 219 aa10.83□□□□□ -0.68
MCF2-209ENST00000520602 GTF3C4Q9UKN8 822 aa10.83□□□□□ -0.68
MCF2-209ENST00000520602 TTC7AQ9ULT0 858 aaPredicted RBP10.83□□□□□ -0.68
MCF2-209ENST00000520602 HMGB1P1B2RPK0 211 aaPredicted RBP10.83□□□□□ -0.68
MCF2-209ENST00000520602 HP1BP3Q5SSJ5 553 aaPredicted RBP10.83□□□□□ -0.68
MCF2-209ENST00000520602 ACAD10Q6JQN1 1059 aa10.83□□□□□ -0.68
MCF2-209ENST00000520602 EFCAB12Q6NXP0 572 aa10.83□□□□□ -0.68
MCF2-209ENST00000520602 EPS8L1Q8TE68 723 aa10.83□□□□□ -0.68
MCF2-209ENST00000520602 AENQ8WTP8 325 aaKnown RBP10.83□□□□□ -0.68
MCF2-209ENST00000520602 ZSWIM1Q9BR11 485 aa10.83□□□□□ -0.68
MCF2-209ENST00000520602 DNAI2Q9GZS0 605 aa10.83□□□□□ -0.68
MCF2-209ENST00000520602 ADARB2Q9NS39 739 aaKnown RBP10.83□□□□□ -0.68
MCF2-209ENST00000520602 RRP15Q9Y3B9 282 aaKnown RBP10.83□□□□□ -0.68
MCF2-209ENST00000520602 PIK3R2O00459 728 aa10.83□□□□□ -0.68
MCF2-209ENST00000520602 UBA1P22314 1058 aaKnown RBP10.83□□□□□ -0.68
MCF2-209ENST00000520602 FGFR4P22455 802 aa10.83□□□□□ -0.68
MCF2-209ENST00000520602 NAMPTP43490 491 aa10.83□□□□□ -0.68
MCF2-209ENST00000520602 PMS2P54278 862 aa10.83□□□□□ -0.68
MCF2-209ENST00000520602 FASTKD5Q7L8L6 764 aaKnown RBP10.83□□□□□ -0.68
MCF2-209ENST00000520602 ERO1BQ86YB8 467 aa10.83□□□□□ -0.68
MCF2-209ENST00000520602 EXOC8Q8IYI6 725 aa10.83□□□□□ -0.68
MCF2-209ENST00000520602 ASAP3Q8TDY4 903 aa10.83□□□□□ -0.68
MCF2-209ENST00000520602 RSAD2Q8WXG1 361 aa10.83□□□□□ -0.68
MCF2-209ENST00000520602 ATP6V1G3Q96LB4 118 aa10.83□□□□□ -0.68
MCF2-209ENST00000520602 TEPSINQ96N21 525 aa10.83□□□□□ -0.68
MCF2-209ENST00000520602 ERP44Q9BS26 406 aa10.83□□□□□ -0.68
MCF2-209ENST00000520602 MTMR12Q9C0I1 747 aa10.83□□□□□ -0.68
MCF2-209ENST00000520602 RASSF4Q9H2L5 321 aa10.83□□□□□ -0.68
MCF2-209ENST00000520602 NKIRAS1Q9NYS0 192 aa10.83□□□□□ -0.68
MCF2-209ENST00000520602 PCSK1NQ9UHG2 260 aa10.83□□□□□ -0.68
MCF2-209ENST00000520602 SCINQ9Y6U3 715 aa10.83□□□□□ -0.68
MCF2-209ENST00000520602 GZMAP12544 262 aa10.82□□□□□ -0.68
MCF2-209ENST00000520602 KRT15P19012 456 aa10.82□□□□□ -0.68
MCF2-209ENST00000520602 HSD17B3P37058 310 aa10.82□□□□□ -0.68
MCF2-209ENST00000520602 RFC5P40937 340 aa10.82□□□□□ -0.68
MCF2-209ENST00000520602 LIG3P49916 1009 aa10.82□□□□□ -0.68
MCF2-209ENST00000520602 TMEM62Q0P6H9 643 aa10.82□□□□□ -0.68
MCF2-209ENST00000520602 ORC1Q13415 861 aa10.82□□□□□ -0.68
MCF2-209ENST00000520602 CUL2Q13617 745 aa10.82□□□□□ -0.68
MCF2-209ENST00000520602 SURF1Q15526 300 aa10.82□□□□□ -0.68
MCF2-209ENST00000520602 CDO1Q16878 200 aa10.82□□□□□ -0.68
MCF2-209ENST00000520602 CLMNQ96JQ2 1002 aa10.82□□□□□ -0.68
MCF2-209ENST00000520602 ASCC2Q9H1I8 757 aaPredicted RBP10.82□□□□□ -0.68
MCF2-209ENST00000520602 DMAC2Q9NW81 257 aa10.82□□□□□ -0.68
MCF2-209ENST00000520602 SAMD15Q9P1V8 674 aa10.82□□□□□ -0.68
MCF2-209ENST00000520602 PNMA3Q9UL41 463 aa10.82□□□□□ -0.68
MCF2-209ENST00000520602 MYH10P35580 1976 aa10.82□□□□□ -0.68
MCF2-209ENST00000520602 POC1B-GALNT4F8VUJ3 575 aa10.82□□□□□ -0.68
MCF2-209ENST00000520602 RASGRF2O14827 1237 aa10.82□□□□□ -0.68
MCF2-209ENST00000520602 PPFIA4O75335 1185 aa10.82□□□□□ -0.68
MCF2-209ENST00000520602 PSMA2P25787 234 aa10.82□□□□□ -0.68
MCF2-209ENST00000520602 GTF2H1P32780 548 aa10.82□□□□□ -0.68
MCF2-209ENST00000520602 PHKA2P46019 1235 aa10.82□□□□□ -0.68
MCF2-209ENST00000520602 MARCKSL1P49006 195 aa10.82□□□□□ -0.68
MCF2-209ENST00000520602 MXD4Q14582 209 aaPredicted RBP10.82□□□□□ -0.68
MCF2-209ENST00000520602 C9orf131Q5VYM1 1079 aa10.82□□□□□ -0.68
MCF2-209ENST00000520602 TAOK1Q7L7X3 1001 aa10.82□□□□□ -0.68
MCF2-209ENST00000520602 ANKS4BQ8N8V4 417 aa10.82□□□□□ -0.68
MCF2-209ENST00000520602 ATG4AQ8WYN0 398 aa10.82□□□□□ -0.68
MCF2-209ENST00000520602 RUBCNQ92622 972 aa10.82□□□□□ -0.68
MCF2-209ENST00000520602 C2orf40Q9H1Z8 148 aa10.82□□□□□ -0.68
MCF2-209ENST00000520602 ZNF214Q9UL59 606 aaPredicted RBP10.82□□□□□ -0.68
MCF2-209ENST00000520602 LAMB2P55268 1798 aa10.82□□□□□ -0.68
MCF2-209ENST00000520602 FAM187AA6NFU0 413 aa10.82□□□□□ -0.68
MCF2-209ENST00000520602 PHF2O75151 1096 aa10.82□□□□□ -0.68
MCF2-209ENST00000520602 LYPLA2O95372 231 aa10.82□□□□□ -0.68
MCF2-209ENST00000520602 BRD2P25440 801 aaKnown RBP10.82□□□□□ -0.68
MCF2-209ENST00000520602 IER5Q5VY09 327 aa10.82□□□□□ -0.68
MCF2-209ENST00000520602 OR6B2Q6IFH4 312 aa10.82□□□□□ -0.68
MCF2-209ENST00000520602 RHOT1Q8IXI2 618 aa10.82□□□□□ -0.68
MCF2-209ENST00000520602 DNERQ8NFT8 737 aa10.82□□□□□ -0.68
MCF2-209ENST00000520602 SMARCAD1Q9H4L7 1026 aa10.82□□□□□ -0.68
MCF2-209ENST00000520602 KCNA2P16389 499 aa10.81□□□□□ -0.68
MCF2-209ENST00000520602 GLRA2P23416 452 aa10.81□□□□□ -0.68
MCF2-209ENST00000520602 GBP1P32455 592 aa10.81□□□□□ -0.68
MCF2-209ENST00000520602 NCKAP1LP55160 1127 aa10.81□□□□□ -0.68
MCF2-209ENST00000520602 KRT17Q04695 432 aa10.81□□□□□ -0.68
MCF2-209ENST00000520602 DHX34Q14147 1143 aaKnown RBP10.81□□□□□ -0.68
MCF2-209ENST00000520602 KIF22Q14807 665 aa10.81□□□□□ -0.68
MCF2-209ENST00000520602 SLC13A5Q86YT5 568 aaPredicted RBP10.81□□□□□ -0.68
MCF2-209ENST00000520602 COPS5Q92905 334 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms