RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 EPCAMP16422 314 aa10.29□□□□□ -0.76
CTNNA1-221ENST00000520339 GLRA2P23416 452 aa10.29□□□□□ -0.76
CTNNA1-221ENST00000520339 RARRES1P49788 294 aa10.29□□□□□ -0.76
CTNNA1-221ENST00000520339 MBTD1Q05BQ5 628 aa10.29□□□□□ -0.76
CTNNA1-221ENST00000520339 SIGLEC14Q08ET2 396 aa10.29□□□□□ -0.76
CTNNA1-221ENST00000520339 CAPSQ13938 189 aa10.29□□□□□ -0.76
CTNNA1-221ENST00000520339 TRIM29Q14134 588 aa10.29□□□□□ -0.76
CTNNA1-221ENST00000520339 TFDP1Q14186 410 aa10.29□□□□□ -0.76
CTNNA1-221ENST00000520339 PTPN14Q15678 1187 aa10.29□□□□□ -0.76
CTNNA1-221ENST00000520339 PTPN21Q16825 1174 aa10.29□□□□□ -0.76
CTNNA1-221ENST00000520339 CES5AQ6NT32 575 aa10.29□□□□□ -0.76
CTNNA1-221ENST00000520339 KANK3Q6NY19 840 aa10.29□□□□□ -0.76
CTNNA1-221ENST00000520339 PIGOQ8TEQ8 1089 aa10.29□□□□□ -0.76
CTNNA1-221ENST00000520339 ASIC4Q96FT7 647 aa10.29□□□□□ -0.76
CTNNA1-221ENST00000520339 KLHL5Q96PQ7 755 aa10.29□□□□□ -0.76
CTNNA1-221ENST00000520339 GAD1Q99259 594 aa10.29□□□□□ -0.76
CTNNA1-221ENST00000520339 NFKBIZQ9BYH8 718 aa10.29□□□□□ -0.76
CTNNA1-221ENST00000520339 SAP130Q9H0E3 1048 aa10.29□□□□□ -0.76
CTNNA1-221ENST00000520339 CSRNP2Q9H175 543 aa10.29□□□□□ -0.76
CTNNA1-221ENST00000520339 POMKQ9H5K3 350 aa10.29□□□□□ -0.76
CTNNA1-221ENST00000520339 UBN1Q9NPG3 1134 aa10.29□□□□□ -0.76
CTNNA1-221ENST00000520339 DZANK1Q9NVP4 752 aa10.29□□□□□ -0.76
CTNNA1-221ENST00000520339 MIOSQ9NXC5 875 aa10.29□□□□□ -0.76
CTNNA1-221ENST00000520339 STK39Q9UEW8 545 aa10.29□□□□□ -0.76
CTNNA1-221ENST00000520339 FAN1Q9Y2M0 1017 aa10.29□□□□□ -0.76
CTNNA1-221ENST00000520339 IPPQ9Y573 584 aa10.29□□□□□ -0.76
CTNNA1-221ENST00000520339 NLRC5Q86WI3 1866 aa10.29□□□□□ -0.76
CTNNA1-221ENST00000520339 INO80B-WBP1J3KQ70 363 aa10.28□□□□□ -0.76
CTNNA1-221ENST00000520339 NRP1O14786 923 aa10.28□□□□□ -0.76
CTNNA1-221ENST00000520339 ERLIN2O94905 339 aa10.28□□□□□ -0.76
CTNNA1-221ENST00000520339 EFEMP2O95967 443 aa10.28□□□□□ -0.76
CTNNA1-221ENST00000520339 WEE2P0C1S8 567 aa10.28□□□□□ -0.76
CTNNA1-221ENST00000520339 ARF4P18085 180 aaPredicted RBP10.28□□□□□ -0.76
CTNNA1-221ENST00000520339 CA8P35219 290 aa10.28□□□□□ -0.76
CTNNA1-221ENST00000520339 MTHFRP42898 656 aa10.28□□□□□ -0.76
CTNNA1-221ENST00000520339 GUCY1B3Q02153 619 aa10.28□□□□□ -0.76
CTNNA1-221ENST00000520339 NHLH1Q02575 133 aa10.28□□□□□ -0.76
CTNNA1-221ENST00000520339 DSC1Q08554 894 aa10.28□□□□□ -0.76
CTNNA1-221ENST00000520339 NCBP1Q09161 790 aaKnown RBP10.28□□□□□ -0.76
CTNNA1-221ENST00000520339 ATAT1Q5SQI0 421 aa10.28□□□□□ -0.76
CTNNA1-221ENST00000520339 RARS2Q5T160 578 aaKnown RBP10.28□□□□□ -0.76
CTNNA1-221ENST00000520339 C16orf46Q6P387 395 aa10.28□□□□□ -0.76
CTNNA1-221ENST00000520339 NOTUMQ6P988 496 aa10.28□□□□□ -0.76
CTNNA1-221ENST00000520339 DNAJC14Q6Y2X3 702 aaPredicted RBP10.28□□□□□ -0.76
CTNNA1-221ENST00000520339 PPFIBP1Q86W92 1011 aa10.28□□□□□ -0.76
CTNNA1-221ENST00000520339 CATSPER3Q86XQ3 398 aa10.28□□□□□ -0.76
CTNNA1-221ENST00000520339 COLGALT2Q8IYK4 626 aa10.28□□□□□ -0.76
CTNNA1-221ENST00000520339 TMEM87AQ8NBN3 555 aa10.28□□□□□ -0.76
CTNNA1-221ENST00000520339 FEZF2Q8TBJ5 459 aa10.28□□□□□ -0.76
CTNNA1-221ENST00000520339 HPS1Q92902 700 aa10.28□□□□□ -0.76
CTNNA1-221ENST00000520339 CPB2Q96IY4 423 aa10.28□□□□□ -0.76
CTNNA1-221ENST00000520339 RIPOR3Q96MK2 946 aa10.28□□□□□ -0.76
CTNNA1-221ENST00000520339 FAM193BQ96PV7 902 aaPredicted RBP10.28□□□□□ -0.76
CTNNA1-221ENST00000520339 POLR3FQ9H1D9 316 aaPredicted RBP10.28□□□□□ -0.76
CTNNA1-221ENST00000520339 MARCH5Q9NX47 278 aa10.28□□□□□ -0.76
CTNNA1-221ENST00000520339 ZNF232Q9UNY5 417 aa10.28□□□□□ -0.76
CTNNA1-221ENST00000520339 LIMCH1Q9UPQ0 1083 aa10.28□□□□□ -0.76
CTNNA1-221ENST00000520339 GIT1Q9Y2X7 761 aa10.28□□□□□ -0.76
CTNNA1-221ENST00000520339 NR2E1Q9Y466 385 aa10.28□□□□□ -0.76
CTNNA1-221ENST00000520339 HES2Q9Y543 173 aa10.28□□□□□ -0.76
CTNNA1-221ENST00000520339 SERTM1A2A2V5 107 aa10.27□□□□□ -0.77
CTNNA1-221ENST00000520339 ARL5CA6NH57 179 aa10.27□□□□□ -0.77
CTNNA1-221ENST00000520339 C2CD4DB7Z1M9 353 aa10.27□□□□□ -0.77
CTNNA1-221ENST00000520339 B4GALT5O43286 388 aa10.27□□□□□ -0.77
CTNNA1-221ENST00000520339 MED24O75448 989 aa10.27□□□□□ -0.77
CTNNA1-221ENST00000520339 SOD2P04179 222 aa10.27□□□□□ -0.77
CTNNA1-221ENST00000520339 CNPP09543 421 aaKnown RBP10.27□□□□□ -0.77
CTNNA1-221ENST00000520339 ATP2B1P20020 1258 aa10.27□□□□□ -0.77
CTNNA1-221ENST00000520339 SP100P23497 879 aaPredicted RBP10.27□□□□□ -0.77
CTNNA1-221ENST00000520339 MCM7P33993 719 aa10.27□□□□□ -0.77
CTNNA1-221ENST00000520339 SAFBQ15424 915 aaKnown RBP eCLIP10.27□□□□□ -0.77
CTNNA1-221ENST00000520339 ZNF174Q15697 407 aa10.27□□□□□ -0.77
CTNNA1-221ENST00000520339 ECM1Q16610 540 aa10.27□□□□□ -0.77
CTNNA1-221ENST00000520339 KIAA1841Q6NSI8 718 aa10.27□□□□□ -0.77
CTNNA1-221ENST00000520339 TAS1R1Q7RTX1 841 aa10.27□□□□□ -0.77
CTNNA1-221ENST00000520339 CABP7Q86V35 215 aa10.27□□□□□ -0.77
CTNNA1-221ENST00000520339 ALYREFQ86V81 257 aaKnown RBP10.27□□□□□ -0.77
CTNNA1-221ENST00000520339 RNF168Q8IYW5 571 aaPredicted RBP10.27□□□□□ -0.77
CTNNA1-221ENST00000520339 GSTCDQ8NEC7 633 aa10.27□□□□□ -0.77
CTNNA1-221ENST00000520339 LLPHQ9BRT6 129 aaKnown RBP10.27□□□□□ -0.77
CTNNA1-221ENST00000520339 POLR3CQ9BUI4 534 aaPredicted RBP10.27□□□□□ -0.77
CTNNA1-221ENST00000520339 HERC2P3Q9BVR0 1158 aa10.27□□□□□ -0.77
CTNNA1-221ENST00000520339 EMILIN2Q9BXX0 1053 aa10.27□□□□□ -0.77
CTNNA1-221ENST00000520339 TUFT1Q9NNX1 390 aa10.27□□□□□ -0.77
CTNNA1-221ENST00000520339 GPRC5CQ9NQ84 441 aa10.27□□□□□ -0.77
CTNNA1-221ENST00000520339 DBR1Q9UK59 544 aaKnown RBP10.27□□□□□ -0.77
CTNNA1-221ENST00000520339 PRG3Q9Y2Y8 225 aaPredicted RBP10.27□□□□□ -0.77
CTNNA1-221ENST00000520339 FNDC1Q4ZHG4 1894 aaPredicted RBP10.27□□□□□ -0.77
CTNNA1-221ENST00000520339 MYH9P35579 1960 aaKnown RBP10.26□□□□□ -0.77
CTNNA1-221ENST00000520339 ZDBF2Q9HCK1 2354 aa10.26□□□□□ -0.77
CTNNA1-221ENST00000520339 A0A1B0GUA9 196 aa10.26□□□□□ -0.77
CTNNA1-221ENST00000520339 USO1O60763 962 aaKnown RBP10.26□□□□□ -0.77
CTNNA1-221ENST00000520339 FAM13AO94988 1023 aa10.26□□□□□ -0.77
CTNNA1-221ENST00000520339 SSBP05455 408 aaKnown RBP eCLIP10.26□□□□□ -0.77
CTNNA1-221ENST00000520339 KLRC2P26717 231 aa10.26□□□□□ -0.77
CTNNA1-221ENST00000520339 MLH1P40692 756 aa10.26□□□□□ -0.77
CTNNA1-221ENST00000520339 OR1G1P47890 313 aa10.26□□□□□ -0.77
CTNNA1-221ENST00000520339 SCNN1GP51170 649 aa10.26□□□□□ -0.77
CTNNA1-221ENST00000520339 CLCN4P51793 760 aa10.26□□□□□ -0.77
CTNNA1-221ENST00000520339 KIAA0319Q5VV43 1072 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms