RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 SDSP20132 328 aa5.49□□□□□ -1.53
SDCBP-207ENST00000520168 CD72P21854 359 aa5.49□□□□□ -1.53
SDCBP-207ENST00000520168 HOXA6P31267 233 aa5.49□□□□□ -1.53
SDCBP-207ENST00000520168 CXCL12P48061 93 aa5.49□□□□□ -1.53
SDCBP-207ENST00000520168 CLK2P49760 499 aaKnown RBP5.49□□□□□ -1.53
SDCBP-207ENST00000520168 PDE1AP54750 535 aa5.49□□□□□ -1.53
SDCBP-207ENST00000520168 RING1Q06587 406 aa5.49□□□□□ -1.53
SDCBP-207ENST00000520168 AP3B2Q13367 1082 aa5.49□□□□□ -1.53
SDCBP-207ENST00000520168 FZD5Q13467 585 aa5.49□□□□□ -1.53
SDCBP-207ENST00000520168 LRRC32Q14392 662 aa5.49□□□□□ -1.53
SDCBP-207ENST00000520168 PCBP1Q15365 356 aaKnown RBP eCLIP5.49□□□□□ -1.53
SDCBP-207ENST00000520168 LPAL2Q16609 132 aa5.49□□□□□ -1.53
SDCBP-207ENST00000520168 UVSSAQ2YD98 709 aa5.49□□□□□ -1.53
SDCBP-207ENST00000520168 USP41Q3LFD5 358 aa5.49□□□□□ -1.53
SDCBP-207ENST00000520168 STPG1Q5TH74 334 aa5.49□□□□□ -1.53
SDCBP-207ENST00000520168 SWSAP1Q6NVH7 229 aa5.49□□□□□ -1.53
SDCBP-207ENST00000520168 PDXDC1Q6P996 788 aa5.49□□□□□ -1.53
SDCBP-207ENST00000520168 LILRA6Q6PI73 481 aa5.49□□□□□ -1.53
SDCBP-207ENST00000520168 CEP68Q76N32 757 aa5.49□□□□□ -1.53
SDCBP-207ENST00000520168 ZNF280BQ86YH2 543 aa5.49□□□□□ -1.53
SDCBP-207ENST00000520168 SPEM1Q8N4L4 309 aa5.49□□□□□ -1.53
SDCBP-207ENST00000520168 ZNF713Q8N859 430 aaPredicted RBP5.49□□□□□ -1.53
SDCBP-207ENST00000520168 OTUD7AQ8TE49 926 aaPredicted RBP5.49□□□□□ -1.53
SDCBP-207ENST00000520168 WHAMMQ8TF30 809 aa5.49□□□□□ -1.53
SDCBP-207ENST00000520168 FGF13Q92913 245 aa5.49□□□□□ -1.53
SDCBP-207ENST00000520168 ELSPBP1Q96BH3 223 aa5.49□□□□□ -1.53
SDCBP-207ENST00000520168 MTA3Q9BTC8 594 aa5.49□□□□□ -1.53
SDCBP-207ENST00000520168 RSAD1Q9HA92 442 aa5.49□□□□□ -1.53
SDCBP-207ENST00000520168 TRPV5Q9NQA5 729 aa5.49□□□□□ -1.53
SDCBP-207ENST00000520168 CHST7Q9NS84 486 aa5.49□□□□□ -1.53
SDCBP-207ENST00000520168 NRBP2Q9NSY0 501 aa5.49□□□□□ -1.53
SDCBP-207ENST00000520168 FBXW11Q9UKB1 542 aa5.49□□□□□ -1.53
SDCBP-207ENST00000520168 PCDHGA5Q9Y5G8 931 aa5.49□□□□□ -1.53
SDCBP-207ENST00000520168 PCDHA10Q9Y5I2 948 aa5.49□□□□□ -1.53
SDCBP-207ENST00000520168 ZMYM2Q9UBW7 1377 aa5.49□□□□□ -1.53
SDCBP-207ENST00000520168 NUP210Q8TEM1 1887 aaPredicted RBP5.49□□□□□ -1.53
SDCBP-207ENST00000520168 ARID2Q68CP9 1835 aa5.48□□□□□ -1.53
SDCBP-207ENST00000520168 VWA8A3KMH1 1905 aa5.48□□□□□ -1.53
SDCBP-207ENST00000520168 CCDC163A0A0D9SF12 145 aa5.48□□□□□ -1.53
SDCBP-207ENST00000520168 DDX39AO00148 427 aaKnown RBP5.48□□□□□ -1.53
SDCBP-207ENST00000520168 AKAP3O75969 853 aa5.48□□□□□ -1.53
SDCBP-207ENST00000520168 EPN2O95208 641 aa5.48□□□□□ -1.53
SDCBP-207ENST00000520168 CCNE2O96020 404 aa5.48□□□□□ -1.53
SDCBP-207ENST00000520168 CALM1P0DP23 149 aa5.48□□□□□ -1.53
SDCBP-207ENST00000520168 CALM2P0DP24 149 aa5.48□□□□□ -1.53
SDCBP-207ENST00000520168 CALM3P0DP25 149 aa5.48□□□□□ -1.53
SDCBP-207ENST00000520168 CEACAM1P13688 526 aa5.48□□□□□ -1.53
SDCBP-207ENST00000520168 ATP4AP20648 1035 aa5.48□□□□□ -1.53
SDCBP-207ENST00000520168 ZNF76P36508 570 aa5.48□□□□□ -1.53
SDCBP-207ENST00000520168 SREBF1P36956 1147 aa5.48□□□□□ -1.53
SDCBP-207ENST00000520168 CTSOP43234 321 aaPredicted RBP5.48□□□□□ -1.53
SDCBP-207ENST00000520168 RBM25P49756 843 aaKnown RBP5.48□□□□□ -1.53
SDCBP-207ENST00000520168 UBE2SQ16763 222 aa5.48□□□□□ -1.53
SDCBP-207ENST00000520168 PABPC1LQ4VXU2 614 aaKnown RBP5.48□□□□□ -1.53
SDCBP-207ENST00000520168 PPM1LQ5SGD2 360 aa5.48□□□□□ -1.53
SDCBP-207ENST00000520168 AXDND1Q5T1B0 1012 aaPredicted RBP5.48□□□□□ -1.53
SDCBP-207ENST00000520168 DAB2IPQ5VWQ8 1189 aa5.48□□□□□ -1.53
SDCBP-207ENST00000520168 PSAPL1Q6NUJ1 521 aa5.48□□□□□ -1.53
SDCBP-207ENST00000520168 AGMOQ6ZNB7 445 aa5.48□□□□□ -1.53
SDCBP-207ENST00000520168 CYB5R4Q7L1T6 521 aa5.48□□□□□ -1.53
SDCBP-207ENST00000520168 CATSPER4Q7RTX7 472 aa5.48□□□□□ -1.53
SDCBP-207ENST00000520168 GRASPQ7Z6J2 395 aaPredicted RBP5.48□□□□□ -1.53
SDCBP-207ENST00000520168 RALYLQ86SE5 291 aaKnown RBP5.48□□□□□ -1.53
SDCBP-207ENST00000520168 PALB2Q86YC2 1186 aa5.48□□□□□ -1.53
SDCBP-207ENST00000520168 HACE1Q8IYU2 909 aa5.48□□□□□ -1.53
SDCBP-207ENST00000520168 TMTC2Q8N394 836 aa5.48□□□□□ -1.53
SDCBP-207ENST00000520168 LRRC71Q8N4P6 559 aa5.48□□□□□ -1.53
SDCBP-207ENST00000520168 NCOA7Q8NI08 942 aa5.48□□□□□ -1.53
SDCBP-207ENST00000520168 PIBF1Q8WXW3 757 aa5.48□□□□□ -1.53
SDCBP-207ENST00000520168 ZCCHC14Q8WYQ9 949 aaKnown RBP5.48□□□□□ -1.53
SDCBP-207ENST00000520168 GATA6Q92908 595 aa5.48□□□□□ -1.53
SDCBP-207ENST00000520168 LPPQ93052 612 aa5.48□□□□□ -1.53
SDCBP-207ENST00000520168 RILPL2Q969X0 211 aa5.48□□□□□ -1.53
SDCBP-207ENST00000520168 KXD1Q9BQD3 176 aa5.48□□□□□ -1.53
SDCBP-207ENST00000520168 JPH2Q9BR39 696 aaPredicted RBP5.48□□□□□ -1.53
SDCBP-207ENST00000520168 RPP25Q9BUL9 199 aaKnown RBP5.48□□□□□ -1.53
SDCBP-207ENST00000520168 COLEC11Q9BWP8 271 aa5.48□□□□□ -1.53
SDCBP-207ENST00000520168 AVENQ9NQS1 362 aaPredicted RBP5.48□□□□□ -1.53
SDCBP-207ENST00000520168 HEBP1Q9NRV9 189 aa5.48□□□□□ -1.53
SDCBP-207ENST00000520168 DIAPH3Q9NSV4 1193 aa5.48□□□□□ -1.53
SDCBP-207ENST00000520168 AGPAT5Q9NUQ2 364 aa5.48□□□□□ -1.53
SDCBP-207ENST00000520168 MARCH5Q9NX47 278 aa5.48□□□□□ -1.53
SDCBP-207ENST00000520168 FKBPLQ9UIM3 349 aa5.48□□□□□ -1.53
SDCBP-207ENST00000520168 PCDHB2Q9Y5E7 798 aa5.48□□□□□ -1.53
SDCBP-207ENST00000520168 CELSR3Q9NYQ7 3312 aa5.48□□□□□ -1.53
SDCBP-207ENST00000520168 FLNBO75369 2602 aaKnown RBP5.48□□□□□ -1.53
SDCBP-207ENST00000520168 KALRNO60229 2985 aa5.48□□□□□ -1.53
SDCBP-207ENST00000520168 MAST4O15021 2626 aa5.47□□□□□ -1.53
SDCBP-207ENST00000520168 HELZ2Q9BYK8 2649 aaKnown RBP5.47□□□□□ -1.53
SDCBP-207ENST00000520168 F5P12259 2224 aa5.47□□□□□ -1.53
SDCBP-207ENST00000520168 WDR64B1ANS9 1081 aa5.47□□□□□ -1.53
SDCBP-207ENST00000520168 DHX15O43143 795 aaKnown RBP5.47□□□□□ -1.53
SDCBP-207ENST00000520168 DDHD2O94830 711 aa5.47□□□□□ -1.53
SDCBP-207ENST00000520168 MICAL2O94851 1124 aa5.47□□□□□ -1.53
SDCBP-207ENST00000520168 C8AP07357 584 aa5.47□□□□□ -1.53
SDCBP-207ENST00000520168 SPATA31D3P0C874 917 aa5.47□□□□□ -1.53
SDCBP-207ENST00000520168 NCLP19338 710 aaKnown RBP5.47□□□□□ -1.53
SDCBP-207ENST00000520168 PTMSP20962 102 aa5.47□□□□□ -1.53
SDCBP-207ENST00000520168 FGFR4P22455 802 aa5.47□□□□□ -1.53
SDCBP-207ENST00000520168 SFNP31947 248 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms