RNA–Protein interactions for RNA: ENST00000519503.5

CHMP7-205, Transcript of charged multivesicular body protein 7, humanhuman

TSL 2

Gene CHMP7, Length 917 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-205ENST00000519503 FGFR3P22607 806 aa23.73■■□□□ 1.39
CHMP7-205ENST00000519503 GBP2P32456 591 aaPredicted RBP23.73■■□□□ 1.39
CHMP7-205ENST00000519503 UBA7P41226 1012 aa23.73■■□□□ 1.39
CHMP7-205ENST00000519503 VCPP55072 806 aaKnown RBP23.73■■□□□ 1.39
CHMP7-205ENST00000519503 OSTNP61366 133 aa23.73■■□□□ 1.39
CHMP7-205ENST00000519503 ZPBP2Q6X784 338 aa23.73■■□□□ 1.39
CHMP7-205ENST00000519503 PRSS33Q8NF86 280 aa23.73■■□□□ 1.39
CHMP7-205ENST00000519503 SNX27Q96L92 541 aa23.73■■□□□ 1.39
CHMP7-205ENST00000519503 PLIN2Q99541 437 aa23.73■■□□□ 1.39
CHMP7-205ENST00000519503 SMOC2Q9H3U7 446 aa23.73■■□□□ 1.39
CHMP7-205ENST00000519503 KCNK12Q9HB15 430 aa23.73■■□□□ 1.39
CHMP7-205ENST00000519503 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.73■■□□□ 1.39
CHMP7-205ENST00000519503 EPS15L1Q9UBC2 864 aa23.73■■□□□ 1.39
CHMP7-205ENST00000519503 ABLIM1O14639 778 aa23.72■■□□□ 1.39
CHMP7-205ENST00000519503 MAPTP10636 758 aaKnown RBP23.72■■□□□ 1.39
CHMP7-205ENST00000519503 KCNE1P15382 129 aa23.72■■□□□ 1.39
CHMP7-205ENST00000519503 PDCP20941 246 aa23.72■■□□□ 1.39
CHMP7-205ENST00000519503 HOXA9P31269 272 aa23.72■■□□□ 1.39
CHMP7-205ENST00000519503 NOLC1Q14978 699 aaKnown RBP eCLIP23.72■■□□□ 1.39
CHMP7-205ENST00000519503 NXPE3Q969Y0 559 aa23.72■■□□□ 1.39
CHMP7-205ENST00000519503 CNTN3Q9P232 1028 aa23.72■■□□□ 1.39
CHMP7-205ENST00000519503 MTRRQ9UBK8 725 aa23.72■■□□□ 1.39
CHMP7-205ENST00000519503 ODF2LQ9ULJ1 636 aa23.72■■□□□ 1.39
CHMP7-205ENST00000519503 DUSP12Q9UNI6 340 aa23.72■■□□□ 1.39
CHMP7-205ENST00000519503 N4BP1O75113 896 aaKnown RBP23.71■■□□□ 1.39
CHMP7-205ENST00000519503 PDGFBP01127 241 aaPredicted RBP23.71■■□□□ 1.39
CHMP7-205ENST00000519503 LONP1P36776 959 aaKnown RBP23.71■■□□□ 1.39
CHMP7-205ENST00000519503 CUL4AQ13619 759 aa23.71■■□□□ 1.39
CHMP7-205ENST00000519503 ANKS3Q6ZW76 656 aa23.71■■□□□ 1.39
CHMP7-205ENST00000519503 RTL10Q7L3V2 364 aa23.71■■□□□ 1.39
CHMP7-205ENST00000519503 KCNN1Q92952 543 aa23.71■■□□□ 1.39
CHMP7-205ENST00000519503 IRF2BPLQ9H1B7 796 aa23.71■■□□□ 1.39
CHMP7-205ENST00000519503 GOLGA2P5Q9HBQ8 144 aa23.71■■□□□ 1.39
CHMP7-205ENST00000519503 ANKFY1Q9P2R3 1169 aa23.71■■□□□ 1.39
CHMP7-205ENST00000519503 C8AP07357 584 aa23.7■■□□□ 1.38
CHMP7-205ENST00000519503 HARSP12081 509 aaKnown RBP23.7■■□□□ 1.38
CHMP7-205ENST00000519503 RPL9P32969 192 aaKnown RBP23.7■■□□□ 1.38
CHMP7-205ENST00000519503 SOX4Q06945 474 aaPredicted RBP23.7■■□□□ 1.38
CHMP7-205ENST00000519503 RAB33AQ14088 237 aa23.7■■□□□ 1.38
CHMP7-205ENST00000519503 ARSHQ5FYA8 562 aa23.7■■□□□ 1.38
CHMP7-205ENST00000519503 PPM1LQ5SGD2 360 aa23.7■■□□□ 1.38
CHMP7-205ENST00000519503 MFSD1Q9H3U5 465 aa23.7■■□□□ 1.38
CHMP7-205ENST00000519503 BACE2Q9Y5Z0 518 aa23.7■■□□□ 1.38
CHMP7-205ENST00000519503 ZFP37Q9Y6Q3 630 aaPredicted RBP23.7■■□□□ 1.38
CHMP7-205ENST00000519503 CLDN3O15551 220 aa23.69■■□□□ 1.38
CHMP7-205ENST00000519503 XYLBO75191 536 aa23.69■■□□□ 1.38
CHMP7-205ENST00000519503 POU2F2P09086 479 aa23.69■■□□□ 1.38
CHMP7-205ENST00000519503 OR1D2P34982 312 aa23.69■■□□□ 1.38
CHMP7-205ENST00000519503 NCKAP1LP55160 1127 aa23.69■■□□□ 1.38
CHMP7-205ENST00000519503 UVSSAQ2YD98 709 aa23.69■■□□□ 1.38
CHMP7-205ENST00000519503 CD300LGQ6UXG3 332 aa23.69■■□□□ 1.38
CHMP7-205ENST00000519503 C3orf58Q8NDZ4 430 aa23.69■■□□□ 1.38
CHMP7-205ENST00000519503 RASSF8Q8NHQ8 419 aa23.69■■□□□ 1.38
CHMP7-205ENST00000519503 ZMAT2Q96NC0 199 aaKnown RBP23.69■■□□□ 1.38
CHMP7-205ENST00000519503 MYADMQ96S97 322 aa23.69■■□□□ 1.38
CHMP7-205ENST00000519503 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.69■■□□□ 1.38
CHMP7-205ENST00000519503 CACNA1HO95180 2353 aa23.68■■□□□ 1.38
CHMP7-205ENST00000519503 PODXLO00592 558 aa23.68■■□□□ 1.38
CHMP7-205ENST00000519503 ADAM12O43184 909 aa23.68■■□□□ 1.38
CHMP7-205ENST00000519503 MCL1Q07820 350 aa23.68■■□□□ 1.38
CHMP7-205ENST00000519503 TCF15Q12870 199 aa23.68■■□□□ 1.38
CHMP7-205ENST00000519503 AXDND1Q5T1B0 1012 aaPredicted RBP23.68■■□□□ 1.38
CHMP7-205ENST00000519503 GET4Q7L5D6 327 aaPredicted RBP23.68■■□□□ 1.38
CHMP7-205ENST00000519503 ALYREFQ86V81 257 aaKnown RBP23.68■■□□□ 1.38
CHMP7-205ENST00000519503 GPBP1Q86WP2 473 aa23.68■■□□□ 1.38
CHMP7-205ENST00000519503 BICD1Q96G01 975 aa23.68■■□□□ 1.38
CHMP7-205ENST00000519503 ZBTB45Q96K62 511 aaPredicted RBP23.68■■□□□ 1.38
CHMP7-205ENST00000519503 REEP2Q9BRK0 252 aa23.68■■□□□ 1.38
CHMP7-205ENST00000519503 CDY1Q9Y6F8 540 aa23.68■■□□□ 1.38
CHMP7-205ENST00000519503 DOCK6Q96HP0 2047 aa23.67■■□□□ 1.38
CHMP7-205ENST00000519503 NPHP3-ACAD11A0A0J9YXS1 232 aa23.67■■□□□ 1.38
CHMP7-205ENST00000519503 VPS37CA5D8V6 355 aaPredicted RBP23.67■■□□□ 1.38
CHMP7-205ENST00000519503 LAMP2P13473 410 aa23.67■■□□□ 1.38
CHMP7-205ENST00000519503 FSHRP23945 695 aa23.67■■□□□ 1.38
CHMP7-205ENST00000519503 TKTP29401 623 aaKnown RBP23.67■■□□□ 1.38
CHMP7-205ENST00000519503 ABCD1P33897 745 aa23.67■■□□□ 1.38
CHMP7-205ENST00000519503 MRE11P49959 708 aa23.67■■□□□ 1.38
CHMP7-205ENST00000519503 CLCN5P51795 746 aa23.67■■□□□ 1.38
CHMP7-205ENST00000519503 SF3A1Q15459 793 aaKnown RBP23.67■■□□□ 1.38
CHMP7-205ENST00000519503 KYAT1Q16773 422 aa23.67■■□□□ 1.38
CHMP7-205ENST00000519503 ASTLQ6HA08 431 aaPredicted RBP23.67■■□□□ 1.38
CHMP7-205ENST00000519503 HAUS6Q7Z4H7 955 aa23.67■■□□□ 1.38
CHMP7-205ENST00000519503 SLC7A14Q8TBB6 771 aa23.67■■□□□ 1.38
CHMP7-205ENST00000519503 PLEKHA5Q9HAU0 1116 aa23.67■■□□□ 1.38
CHMP7-205ENST00000519503 PARVGQ9HBI0 331 aa23.67■■□□□ 1.38
CHMP7-205ENST00000519503 FBXL21Q9UKT6 434 aa23.67■■□□□ 1.38
CHMP7-205ENST00000519503 NUB1Q9Y5A7 615 aa23.67■■□□□ 1.38
CHMP7-205ENST00000519503 SYN3O14994 580 aa23.66■■□□□ 1.38
CHMP7-205ENST00000519503 FAM13AO94988 1023 aa23.66■■□□□ 1.38
CHMP7-205ENST00000519503 PLCG1P19174 1290 aa23.66■■□□□ 1.38
CHMP7-205ENST00000519503 MATR3P43243 847 aaKnown RBP eCLIP23.66■■□□□ 1.38
CHMP7-205ENST00000519503 BRCC3P46736 316 aa23.66■■□□□ 1.38
CHMP7-205ENST00000519503 ZNF131P52739 623 aa23.66■■□□□ 1.38
CHMP7-205ENST00000519503 CACNB1Q02641 598 aaPredicted RBP23.66■■□□□ 1.38
CHMP7-205ENST00000519503 GRASPQ7Z6J2 395 aaPredicted RBP23.66■■□□□ 1.38
CHMP7-205ENST00000519503 I3L4J1 428 aa23.65■■□□□ 1.38
CHMP7-205ENST00000519503 KRT18P05783 430 aaKnown RBP23.65■■□□□ 1.38
CHMP7-205ENST00000519503 CLTAP09496 248 aa23.65■■□□□ 1.38
CHMP7-205ENST00000519503 IGFBP6P24592 240 aaPredicted RBP23.65■■□□□ 1.38
CHMP7-205ENST00000519503 KARSQ15046 597 aaKnown RBP23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms