RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 AKIP1Q9NQ31 210 aa4.95□□□□□ -1.62
SKP1-205ENST00000519054 FBXO34Q9NWN3 711 aa4.95□□□□□ -1.62
SKP1-205ENST00000519054 IPPQ9Y573 584 aa4.95□□□□□ -1.62
SKP1-205ENST00000519054 TCRBV7S2A1N4TA0A589 114 aa4.94□□□□□ -1.62
SKP1-205ENST00000519054 DIRC3C9JPN6 131 aa4.94□□□□□ -1.62
SKP1-205ENST00000519054 RNASET2O00584 256 aaKnown RBP4.94□□□□□ -1.62
SKP1-205ENST00000519054 SNUPNO95149 360 aaKnown RBP4.94□□□□□ -1.62
SKP1-205ENST00000519054 ITGB1P05556 798 aa4.94□□□□□ -1.62
SKP1-205ENST00000519054 LAG3P18627 525 aa4.94□□□□□ -1.62
SKP1-205ENST00000519054 SLC6A2P23975 617 aa4.94□□□□□ -1.62
SKP1-205ENST00000519054 TARDBPQ13148 414 aaKnown RBP eCLIP4.94□□□□□ -1.62
SKP1-205ENST00000519054 UBXN2BQ14CS0 331 aa4.94□□□□□ -1.62
SKP1-205ENST00000519054 TIGD2Q4W5G0 525 aa4.94□□□□□ -1.62
SKP1-205ENST00000519054 SEM1Q6ZVN7 128 aa4.94□□□□□ -1.62
SKP1-205ENST00000519054 MRGPREQ86SM8 312 aa4.94□□□□□ -1.62
SKP1-205ENST00000519054 PLXDC1Q8IUK5 500 aa4.94□□□□□ -1.62
SKP1-205ENST00000519054 LENG9Q96B70 501 aa4.94□□□□□ -1.62
SKP1-205ENST00000519054 SORCS2Q96PQ0 1159 aa4.94□□□□□ -1.62
SKP1-205ENST00000519054 MLST8Q9BVC4 326 aa4.94□□□□□ -1.62
SKP1-205ENST00000519054 FZD1Q9UP38 647 aa4.94□□□□□ -1.62
SKP1-205ENST00000519054 SPEF1Q9Y4P9 236 aa4.94□□□□□ -1.62
SKP1-205ENST00000519054 KIAA0391O15091 583 aaKnown RBP4.93□□□□□ -1.62
SKP1-205ENST00000519054 LPXNO60711 386 aa4.93□□□□□ -1.62
SKP1-205ENST00000519054 ZRANB2O95218 330 aaKnown RBP eCLIP4.93□□□□□ -1.62
SKP1-205ENST00000519054 NDUFA10O95299 355 aa4.93□□□□□ -1.62
SKP1-205ENST00000519054 ABHD16AO95870 558 aa4.93□□□□□ -1.62
SKP1-205ENST00000519054 SPATA31D3P0C874 917 aa4.93□□□□□ -1.62
SKP1-205ENST00000519054 RECQLP46063 649 aaPredicted RBP4.93□□□□□ -1.62
SKP1-205ENST00000519054 ADKP55263 362 aaKnown RBP4.93□□□□□ -1.62
SKP1-205ENST00000519054 IGBP1P78318 339 aa4.93□□□□□ -1.62
SKP1-205ENST00000519054 CDC42EP1Q00587 391 aa4.93□□□□□ -1.62
SKP1-205ENST00000519054 EXOSC10Q01780 885 aaKnown RBP4.93□□□□□ -1.62
SKP1-205ENST00000519054 CREMQ03060 361 aa4.93□□□□□ -1.62
SKP1-205ENST00000519054 AGAP9Q5VTM2 703 aa4.93□□□□□ -1.62
SKP1-205ENST00000519054 TSHZ3Q63HK5 1081 aa4.93□□□□□ -1.62
SKP1-205ENST00000519054 KCNV1Q6PIU1 500 aa4.93□□□□□ -1.62
SKP1-205ENST00000519054 LRRC55Q6ZSA7 311 aa4.93□□□□□ -1.62
SKP1-205ENST00000519054 SPATA31D4Q6ZUB0 917 aa4.93□□□□□ -1.62
SKP1-205ENST00000519054 RHOUQ7L0Q8 258 aa4.93□□□□□ -1.62
SKP1-205ENST00000519054 ZNF627Q7L945 461 aa4.93□□□□□ -1.62
SKP1-205ENST00000519054 ZBTB46Q86UZ6 589 aa4.93□□□□□ -1.62
SKP1-205ENST00000519054 RHOT2Q8IXI1 618 aa4.93□□□□□ -1.62
SKP1-205ENST00000519054 MIER2Q8N344 545 aa4.93□□□□□ -1.62
SKP1-205ENST00000519054 OR56A1Q8NGH5 318 aa4.93□□□□□ -1.62
SKP1-205ENST00000519054 PROKR1Q8TCW9 393 aa4.93□□□□□ -1.62
SKP1-205ENST00000519054 C11orf54Q9H0W9 315 aaPredicted RBP4.93□□□□□ -1.62
SKP1-205ENST00000519054 ATP11BQ9Y2G3 1177 aa4.93□□□□□ -1.62
SKP1-205ENST00000519054 MAP3K2Q9Y2U5 619 aa4.93□□□□□ -1.62
SKP1-205ENST00000519054 LUC7L2Q9Y383 392 aaKnown RBP4.93□□□□□ -1.62
SKP1-205ENST00000519054 GAGE12BA1L429 117 aa4.92□□□□□ -1.62
SKP1-205ENST00000519054 GAGE12HA6NDE8 117 aa4.92□□□□□ -1.62
SKP1-205ENST00000519054 PRSS23O95084 383 aa4.92□□□□□ -1.62
SKP1-205ENST00000519054 CTXN1P60606 82 aa4.92□□□□□ -1.62
SKP1-205ENST00000519054 BEAN1Q3B7T3 259 aa4.92□□□□□ -1.62
SKP1-205ENST00000519054 DCBLD1Q8N8Z6 715 aa4.92□□□□□ -1.62
SKP1-205ENST00000519054 CPEB3Q8NE35 698 aaKnown RBP4.92□□□□□ -1.62
SKP1-205ENST00000519054 IFI44Q8TCB0 444 aa4.92□□□□□ -1.62
SKP1-205ENST00000519054 STAG1Q8WVM7 1258 aa4.92□□□□□ -1.62
SKP1-205ENST00000519054 CHMP4CQ96CF2 233 aa4.92□□□□□ -1.62
SKP1-205ENST00000519054 MYEOVQ96EZ4 313 aa4.92□□□□□ -1.62
SKP1-205ENST00000519054 CLPTM1LQ96KA5 538 aa4.92□□□□□ -1.62
SKP1-205ENST00000519054 ZSWIM1Q9BR11 485 aa4.92□□□□□ -1.62
SKP1-205ENST00000519054 MRIQ9BWK5 157 aa4.92□□□□□ -1.62
SKP1-205ENST00000519054 REXO4Q9GZR2 422 aaKnown RBP4.92□□□□□ -1.62
SKP1-205ENST00000519054 GSTO2Q9H4Y5 243 aa4.92□□□□□ -1.62
SKP1-205ENST00000519054 KLHL11Q9NVR0 708 aa4.92□□□□□ -1.62
SKP1-205ENST00000519054 DDX56Q9NY93 547 aaKnown RBP4.92□□□□□ -1.62
SKP1-205ENST00000519054 ANKFY1Q9P2R3 1169 aa4.92□□□□□ -1.62
SKP1-205ENST00000519054 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.92□□□□□ -1.62
SKP1-205ENST00000519054 PCDHB1Q9Y5F3 818 aa4.92□□□□□ -1.62
SKP1-205ENST00000519054 CENPVL1A0A0U1RR11 272 aa4.91□□□□□ -1.62
SKP1-205ENST00000519054 CDHR4A6H8M9 788 aa4.91□□□□□ -1.62
SKP1-205ENST00000519054 UNC119BA6NIH7 251 aa4.91□□□□□ -1.62
SKP1-205ENST00000519054 SGTAO43765 313 aa4.91□□□□□ -1.62
SKP1-205ENST00000519054 PPFIA4O75335 1185 aa4.91□□□□□ -1.62
SKP1-205ENST00000519054 ALAS1P13196 640 aa4.91□□□□□ -1.62
SKP1-205ENST00000519054 NCLP19338 710 aaKnown RBP4.91□□□□□ -1.62
SKP1-205ENST00000519054 NEK2P51955 445 aa4.91□□□□□ -1.62
SKP1-205ENST00000519054 ZNF280AP59817 542 aaPredicted RBP4.91□□□□□ -1.62
SKP1-205ENST00000519054 ATP2B3Q16720 1220 aa4.91□□□□□ -1.62
SKP1-205ENST00000519054 LY6G5CQ5SRR4 150 aa4.91□□□□□ -1.62
SKP1-205ENST00000519054 GADL1Q6ZQY3 521 aa4.91□□□□□ -1.62
SKP1-205ENST00000519054 VRK3Q8IV63 474 aa4.91□□□□□ -1.62
SKP1-205ENST00000519054 CMTR2Q8IYT2 770 aaKnown RBP4.91□□□□□ -1.62
SKP1-205ENST00000519054 AASDHPPTQ9NRN7 309 aa4.91□□□□□ -1.62
SKP1-205ENST00000519054 FAM30AQ9NZY2 134 aa4.91□□□□□ -1.62
SKP1-205ENST00000519054 HS3ST4Q9Y661 456 aa4.91□□□□□ -1.62
SKP1-205ENST00000519054 FPGT-TNNI3KV9GXZ4 949 aa4.91□□□□□ -1.62
SKP1-205ENST00000519054 AATKQ6ZMQ8 1374 aa4.91□□□□□ -1.62
SKP1-205ENST00000519054 TMEM200CA6NKL6 621 aa4.9□□□□□ -1.63
SKP1-205ENST00000519054 GRM6O15303 877 aa4.9□□□□□ -1.63
SKP1-205ENST00000519054 IL33O95760 270 aa4.9□□□□□ -1.63
SKP1-205ENST00000519054 PDGFRBP09619 1106 aa4.9□□□□□ -1.63
SKP1-205ENST00000519054 SBK3P0C264 359 aa4.9□□□□□ -1.63
SKP1-205ENST00000519054 GCSHP23434 173 aa4.9□□□□□ -1.63
SKP1-205ENST00000519054 DDX6P26196 483 aaKnown RBP eCLIP4.9□□□□□ -1.63
SKP1-205ENST00000519054 HMGA2P52926 109 aa4.9□□□□□ -1.63
SKP1-205ENST00000519054 RESTQ13127 1097 aa4.9□□□□□ -1.63
SKP1-205ENST00000519054 PTPAQ15257 358 aa4.9□□□□□ -1.63
SKP1-205ENST00000519054 DACT2Q5SW24 774 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms