RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 HELQQ8TDG4 1101 aa16.24■□□□□ 0.19
TRAPPC9-205ENST00000518839 FAM212AQ96EL1 285 aa16.24■□□□□ 0.19
TRAPPC9-205ENST00000518839 ACAP3Q96P50 834 aa16.24■□□□□ 0.19
TRAPPC9-205ENST00000518839 IFIH1Q9BYX4 1025 aaKnown RBP16.24■□□□□ 0.19
TRAPPC9-205ENST00000518839 CELF4Q9BZC1 486 aaKnown RBP16.24■□□□□ 0.19
TRAPPC9-205ENST00000518839 PCDHA13Q9Y5I0 950 aa16.24■□□□□ 0.19
TRAPPC9-205ENST00000518839 TRPV2Q9Y5S1 764 aa16.24■□□□□ 0.19
TRAPPC9-205ENST00000518839 MROH7Q68CQ1 1323 aa16.23■□□□□ 0.19
TRAPPC9-205ENST00000518839 CSDE1O75534 798 aaKnown RBP16.23■□□□□ 0.19
TRAPPC9-205ENST00000518839 MAGEA1P43355 309 aa16.23■□□□□ 0.19
TRAPPC9-205ENST00000518839 WNT7BP56706 349 aa16.23■□□□□ 0.19
TRAPPC9-205ENST00000518839 KIF5AQ12840 1032 aa16.23■□□□□ 0.19
TRAPPC9-205ENST00000518839 LMBRD2Q68DH5 695 aaPredicted RBP16.23■□□□□ 0.19
TRAPPC9-205ENST00000518839 GDF6Q6KF10 455 aaPredicted RBP16.23■□□□□ 0.19
TRAPPC9-205ENST00000518839 SERINC5Q86VE9 423 aa16.23■□□□□ 0.19
TRAPPC9-205ENST00000518839 CDR2LQ86X02 465 aaPredicted RBP16.23■□□□□ 0.19
TRAPPC9-205ENST00000518839 CEP120Q8N960 986 aa16.23■□□□□ 0.19
TRAPPC9-205ENST00000518839 ARRDC4Q8NCT1 418 aa16.23■□□□□ 0.19
TRAPPC9-205ENST00000518839 SHC3Q92529 594 aa16.23■□□□□ 0.19
TRAPPC9-205ENST00000518839 DHX38Q92620 1227 aaKnown RBP16.23■□□□□ 0.19
TRAPPC9-205ENST00000518839 FAXDC2Q96IV6 333 aa16.23■□□□□ 0.19
TRAPPC9-205ENST00000518839 TSPAN18Q96SJ8 248 aa16.23■□□□□ 0.19
TRAPPC9-205ENST00000518839 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.23■□□□□ 0.19
TRAPPC9-205ENST00000518839 SEZ6LQ9BYH1 1024 aa16.23■□□□□ 0.19
TRAPPC9-205ENST00000518839 GPR88Q9GZN0 384 aa16.23■□□□□ 0.19
TRAPPC9-205ENST00000518839 PLEKHA5Q9HAU0 1116 aa16.23■□□□□ 0.19
TRAPPC9-205ENST00000518839 LZTFL1Q9NQ48 299 aa16.23■□□□□ 0.19
TRAPPC9-205ENST00000518839 TRIM17Q9Y577 477 aa16.23■□□□□ 0.19
TRAPPC9-205ENST00000518839 PTPRJQ12913 1337 aa16.22■□□□□ 0.19
TRAPPC9-205ENST00000518839 FOXN3O00409 490 aaPredicted RBP16.22■□□□□ 0.19
TRAPPC9-205ENST00000518839 VNN1O95497 513 aa16.22■□□□□ 0.19
TRAPPC9-205ENST00000518839 MYCNP04198 464 aaPredicted RBP16.22■□□□□ 0.19
TRAPPC9-205ENST00000518839 CXCL8P10145 99 aa16.22■□□□□ 0.19
TRAPPC9-205ENST00000518839 ACLYP53396 1101 aa16.22■□□□□ 0.19
TRAPPC9-205ENST00000518839 OSTNP61366 133 aa16.22■□□□□ 0.19
TRAPPC9-205ENST00000518839 PTK2Q05397 1052 aa16.22■□□□□ 0.19
TRAPPC9-205ENST00000518839 TRPC3Q13507 836 aa16.22■□□□□ 0.19
TRAPPC9-205ENST00000518839 NCOA4Q13772 614 aa16.22■□□□□ 0.19
TRAPPC9-205ENST00000518839 SGSM1Q2NKQ1 1148 aa16.22■□□□□ 0.19
TRAPPC9-205ENST00000518839 CCDC122Q5T0U0 273 aa16.22■□□□□ 0.19
TRAPPC9-205ENST00000518839 TRAPPC11Q7Z392 1133 aa16.22■□□□□ 0.19
TRAPPC9-205ENST00000518839 FAM71AQ8IYT1 594 aa16.22■□□□□ 0.19
TRAPPC9-205ENST00000518839 OR5B17Q8NGF7 314 aa16.22■□□□□ 0.19
TRAPPC9-205ENST00000518839 PPP1R13LQ8WUF5 828 aa16.22■□□□□ 0.19
TRAPPC9-205ENST00000518839 TAF4BQ92750 862 aa16.22■□□□□ 0.19
TRAPPC9-205ENST00000518839 GLT1D1Q96MS3 346 aa16.22■□□□□ 0.19
TRAPPC9-205ENST00000518839 KREMEN1Q96MU8 473 aa16.22■□□□□ 0.19
TRAPPC9-205ENST00000518839 CDHR5Q9HBB8 845 aa16.22■□□□□ 0.19
TRAPPC9-205ENST00000518839 DERAQ9Y315 318 aa16.22■□□□□ 0.19
TRAPPC9-205ENST00000518839 PDCD11Q14690 1871 aaKnown RBP16.21■□□□□ 0.19
TRAPPC9-205ENST00000518839 PJA2O43164 708 aa16.21■□□□□ 0.19
TRAPPC9-205ENST00000518839 CAND2O75155 1236 aa16.21■□□□□ 0.19
TRAPPC9-205ENST00000518839 LRRN2O75325 713 aa16.21■□□□□ 0.19
TRAPPC9-205ENST00000518839 NPTXRO95502 500 aa16.21■□□□□ 0.19
TRAPPC9-205ENST00000518839 HOXA11P31270 313 aaPredicted RBP16.21■□□□□ 0.19
TRAPPC9-205ENST00000518839 ARHGAP25P42331 645 aa16.21■□□□□ 0.19
TRAPPC9-205ENST00000518839 YARSP54577 528 aaKnown RBP16.21■□□□□ 0.19
TRAPPC9-205ENST00000518839 BPIFB4P59827 614 aa16.21■□□□□ 0.19
TRAPPC9-205ENST00000518839 GNG11P61952 73 aa16.21■□□□□ 0.19
TRAPPC9-205ENST00000518839 TFAMQ00059 246 aaKnown RBP16.21■□□□□ 0.19
TRAPPC9-205ENST00000518839 CYP27A1Q02318 531 aa16.21■□□□□ 0.19
TRAPPC9-205ENST00000518839 GFPT1Q06210 699 aaPredicted RBP16.21■□□□□ 0.19
TRAPPC9-205ENST00000518839 PTK7Q13308 1070 aa16.21■□□□□ 0.19
TRAPPC9-205ENST00000518839 ITGA7Q13683 1181 aa16.21■□□□□ 0.19
TRAPPC9-205ENST00000518839 ZNF571Q7Z3V5 609 aaPredicted RBP16.21■□□□□ 0.19
TRAPPC9-205ENST00000518839 ZNF592Q92610 1267 aa16.21■□□□□ 0.19
TRAPPC9-205ENST00000518839 TRIM6Q9C030 488 aaPredicted RBP16.21■□□□□ 0.19
TRAPPC9-205ENST00000518839 MTMR12Q9C0I1 747 aa16.21■□□□□ 0.19
TRAPPC9-205ENST00000518839 C2CD2Q9Y426 696 aa16.21■□□□□ 0.19
TRAPPC9-205ENST00000518839 PTCH2Q9Y6C5 1203 aa16.21■□□□□ 0.19
TRAPPC9-205ENST00000518839 CDY2AQ9Y6F7 541 aa16.21■□□□□ 0.19
TRAPPC9-205ENST00000518839 A0A087X0T9 212 aa16.2■□□□□ 0.18
TRAPPC9-205ENST00000518839 LACTBL1A8MY62 500 aa16.2■□□□□ 0.18
TRAPPC9-205ENST00000518839 ZNF263O14978 683 aa16.2■□□□□ 0.18
TRAPPC9-205ENST00000518839 ASS1P00966 412 aaKnown RBP16.2■□□□□ 0.18
TRAPPC9-205ENST00000518839 FAM228BP0C875 321 aa16.2■□□□□ 0.18
TRAPPC9-205ENST00000518839 TNFAIP3P21580 790 aa16.2■□□□□ 0.18
TRAPPC9-205ENST00000518839 FGFR4P22455 802 aa16.2■□□□□ 0.18
TRAPPC9-205ENST00000518839 CASQ1P31415 396 aa16.2■□□□□ 0.18
TRAPPC9-205ENST00000518839 YWHAEP62258 255 aaKnown RBP16.2■□□□□ 0.18
TRAPPC9-205ENST00000518839 NOP14P78316 857 aaKnown RBP16.2■□□□□ 0.18
TRAPPC9-205ENST00000518839 CUL2Q13617 745 aa16.2■□□□□ 0.18
TRAPPC9-205ENST00000518839 NAB2Q15742 525 aa16.2■□□□□ 0.18
TRAPPC9-205ENST00000518839 PTGISQ16647 500 aa16.2■□□□□ 0.18
TRAPPC9-205ENST00000518839 SLC10A6Q3KNW5 377 aa16.2■□□□□ 0.18
TRAPPC9-205ENST00000518839 LHX8Q68G74 356 aa16.2■□□□□ 0.18
TRAPPC9-205ENST00000518839 SYT10Q6XYQ8 523 aa16.2■□□□□ 0.18
TRAPPC9-205ENST00000518839 EFCAB13Q8IY85 973 aa16.2■□□□□ 0.18
TRAPPC9-205ENST00000518839 TATDN2Q93075 761 aa16.2■□□□□ 0.18
TRAPPC9-205ENST00000518839 ADAMTS1Q9UHI8 967 aa16.2■□□□□ 0.18
TRAPPC9-205ENST00000518839 DNAI1Q9UI46 699 aa16.2■□□□□ 0.18
TRAPPC9-205ENST00000518839 INTUQ9ULD6 942 aa16.2■□□□□ 0.18
TRAPPC9-205ENST00000518839 PIN4Q9Y237 131 aaKnown RBP16.2■□□□□ 0.18
TRAPPC9-205ENST00000518839 NOD1Q9Y239 953 aa16.2■□□□□ 0.18
TRAPPC9-205ENST00000518839 R3HCC1Q9Y3T6 440 aaKnown RBP16.2■□□□□ 0.18
TRAPPC9-205ENST00000518839 TRIP11Q15643 1979 aa16.19■□□□□ 0.18
TRAPPC9-205ENST00000518839 PNMA6AP0CW24 399 aaPredicted RBP16.19■□□□□ 0.18
TRAPPC9-205ENST00000518839 ATICP31939 592 aa16.19■□□□□ 0.18
TRAPPC9-205ENST00000518839 USP8P40818 1118 aa16.19■□□□□ 0.18
TRAPPC9-205ENST00000518839 PDE6CP51160 858 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms