RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 MEIS3Q99687 375 aa7.25□□□□□ -1.25
CCDC6-203ENST00000518638 TRPV6Q9H1D0 765 aa7.25□□□□□ -1.25
CCDC6-203ENST00000518638 TMPRSS5Q9H3S3 457 aa7.25□□□□□ -1.25
CCDC6-203ENST00000518638 NOL6Q9H6R4 1146 aaKnown RBP7.25□□□□□ -1.25
CCDC6-203ENST00000518638 FBXO28Q9NVF7 368 aa7.25□□□□□ -1.25
CCDC6-203ENST00000518638 CNOT6Q9ULM6 557 aaKnown RBP7.25□□□□□ -1.25
CCDC6-203ENST00000518638 FPGT-TNNI3KV9GXZ4 949 aa7.25□□□□□ -1.25
CCDC6-203ENST00000518638 BRWD1Q9NSI6 2320 aa7.24□□□□□ -1.25
CCDC6-203ENST00000518638 SCN5AQ14524 2016 aa7.24□□□□□ -1.25
CCDC6-203ENST00000518638 KPNA6O60684 536 aa7.24□□□□□ -1.25
CCDC6-203ENST00000518638 TRIM13O60858 407 aa7.24□□□□□ -1.25
CCDC6-203ENST00000518638 ADRB1P08588 477 aa7.24□□□□□ -1.25
CCDC6-203ENST00000518638 IQCF3P0C7M6 154 aa7.24□□□□□ -1.25
CCDC6-203ENST00000518638 VAV1P15498 845 aa7.24□□□□□ -1.25
CCDC6-203ENST00000518638 CPT1AP50416 773 aa7.24□□□□□ -1.25
CCDC6-203ENST00000518638 HK2P52789 917 aa7.24□□□□□ -1.25
CCDC6-203ENST00000518638 ERVFC1P60507 584 aa7.24□□□□□ -1.25
CCDC6-203ENST00000518638 NFKB2Q00653 900 aa7.24□□□□□ -1.25
CCDC6-203ENST00000518638 DUSP4Q13115 394 aa7.24□□□□□ -1.25
CCDC6-203ENST00000518638 OS9Q13438 667 aaPredicted RBP7.24□□□□□ -1.25
CCDC6-203ENST00000518638 RAB33AQ14088 237 aa7.24□□□□□ -1.25
CCDC6-203ENST00000518638 HERC4Q5GLZ8 1057 aaPredicted RBP7.24□□□□□ -1.25
CCDC6-203ENST00000518638 KIAA1755Q5JYT7 1200 aa7.24□□□□□ -1.25
CCDC6-203ENST00000518638 ERICH6BQ5W0A0 696 aa7.24□□□□□ -1.25
CCDC6-203ENST00000518638 MRM1Q6IN84 353 aaKnown RBP7.24□□□□□ -1.25
CCDC6-203ENST00000518638 NFRKBQ6P4R8 1299 aa7.24□□□□□ -1.25
CCDC6-203ENST00000518638 CELF2-AS1Q8N7Q2 184 aa7.24□□□□□ -1.25
CCDC6-203ENST00000518638 ADCY4Q8NFM4 1077 aa7.24□□□□□ -1.25
CCDC6-203ENST00000518638 CAGE1Q8TC20 777 aa7.24□□□□□ -1.25
CCDC6-203ENST00000518638 PABPC5Q96DU9 382 aaKnown RBP7.24□□□□□ -1.25
CCDC6-203ENST00000518638 MRPL38Q96DV4 380 aaKnown RBP7.24□□□□□ -1.25
CCDC6-203ENST00000518638 RCC1LQ96I51 464 aaKnown RBP7.24□□□□□ -1.25
CCDC6-203ENST00000518638 RAD9AQ99638 391 aa7.24□□□□□ -1.25
CCDC6-203ENST00000518638 RIOK1Q9BRS2 568 aaKnown RBP7.24□□□□□ -1.25
CCDC6-203ENST00000518638 G6PC3Q9BUM1 346 aa7.24□□□□□ -1.25
CCDC6-203ENST00000518638 KATNBL1Q9H079 304 aa7.24□□□□□ -1.25
CCDC6-203ENST00000518638 PIH1D3Q9NQM4 214 aaKnown RBP7.24□□□□□ -1.25
CCDC6-203ENST00000518638 CHD7Q9P2D1 2997 aa7.24□□□□□ -1.25
CCDC6-203ENST00000518638 CHD9Q3L8U1 2897 aa7.24□□□□□ -1.25
CCDC6-203ENST00000518638 LOC102724159A0A0B4J2E5 919 aa7.23□□□□□ -1.25
CCDC6-203ENST00000518638 ABHD14A-ACY1A0A1B0GW23 586 aa7.23□□□□□ -1.25
CCDC6-203ENST00000518638 GJB5O95377 273 aa7.23□□□□□ -1.25
CCDC6-203ENST00000518638 GJB6O95452 261 aa7.23□□□□□ -1.25
CCDC6-203ENST00000518638 GNAI2P04899 355 aa7.23□□□□□ -1.25
CCDC6-203ENST00000518638 EEF2P13639 858 aaKnown RBP7.23□□□□□ -1.25
CCDC6-203ENST00000518638 AKR1B1P15121 316 aa7.23□□□□□ -1.25
CCDC6-203ENST00000518638 RPL10P27635 214 aaKnown RBP7.23□□□□□ -1.25
CCDC6-203ENST00000518638 GTF2F1P35269 517 aaKnown RBP eCLIP7.23□□□□□ -1.25
CCDC6-203ENST00000518638 WDR5P61964 334 aaKnown RBP7.23□□□□□ -1.25
CCDC6-203ENST00000518638 RBL2Q08999 1139 aa7.23□□□□□ -1.25
CCDC6-203ENST00000518638 PWP2Q15269 919 aaKnown RBP7.23□□□□□ -1.25
CCDC6-203ENST00000518638 DDR2Q16832 855 aa7.23□□□□□ -1.25
CCDC6-203ENST00000518638 TKFCQ3LXA3 575 aa7.23□□□□□ -1.25
CCDC6-203ENST00000518638 ZNF385BQ569K4 471 aa7.23□□□□□ -1.25
CCDC6-203ENST00000518638 FAM83BQ5T0W9 1011 aa7.23□□□□□ -1.25
CCDC6-203ENST00000518638 CNKSR3Q6P9H4 555 aa7.23□□□□□ -1.25
CCDC6-203ENST00000518638 IRF2BP1Q8IU81 584 aa7.23□□□□□ -1.25
CCDC6-203ENST00000518638 TMEM151BQ8IW70 566 aa7.23□□□□□ -1.25
CCDC6-203ENST00000518638 ARHGEF39Q8N4T4 335 aa7.23□□□□□ -1.25
CCDC6-203ENST00000518638 PDZD8Q8NEN9 1154 aa7.23□□□□□ -1.25
CCDC6-203ENST00000518638 AFAP1L1Q8TED9 768 aa7.23□□□□□ -1.25
CCDC6-203ENST00000518638 LINC01599Q8WXQ3 324 aa7.23□□□□□ -1.25
CCDC6-203ENST00000518638 SLC12A9Q9BXP2 914 aa7.23□□□□□ -1.25
CCDC6-203ENST00000518638 RNF32Q9H0A6 362 aa7.23□□□□□ -1.25
CCDC6-203ENST00000518638 ACAD9Q9H845 621 aa7.23□□□□□ -1.25
CCDC6-203ENST00000518638 VTA1Q9NP79 307 aa7.23□□□□□ -1.25
CCDC6-203ENST00000518638 ATP8A2Q9NTI2 1148 aa7.23□□□□□ -1.25
CCDC6-203ENST00000518638 APEX2Q9UBZ4 518 aa7.23□□□□□ -1.25
CCDC6-203ENST00000518638 CGGBP1Q9UFW8 167 aaPredicted RBP7.23□□□□□ -1.25
CCDC6-203ENST00000518638 SYNPO2Q9UMS6 1093 aa7.23□□□□□ -1.25
CCDC6-203ENST00000518638 ASTN1O14525 1302 aa7.23□□□□□ -1.25
CCDC6-203ENST00000518638 GRIN2DO15399 1336 aa7.23□□□□□ -1.25
CCDC6-203ENST00000518638 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.22□□□□□ -1.25
CCDC6-203ENST00000518638 TLDC2A0PJX2 215 aa7.22□□□□□ -1.25
CCDC6-203ENST00000518638 NKRFO15226 690 aaKnown RBP eCLIP7.22□□□□□ -1.25
CCDC6-203ENST00000518638 SUSD5O60279 629 aa7.22□□□□□ -1.25
CCDC6-203ENST00000518638 CELA3BP08861 270 aa7.22□□□□□ -1.25
CCDC6-203ENST00000518638 CYP2C9P11712 490 aa7.22□□□□□ -1.25
CCDC6-203ENST00000518638 PSMC6P62333 389 aa7.22□□□□□ -1.25
CCDC6-203ENST00000518638 POU4F1Q01851 419 aa7.22□□□□□ -1.25
CCDC6-203ENST00000518638 PPP2R5DQ14738 602 aa7.22□□□□□ -1.25
CCDC6-203ENST00000518638 FAM47CQ5HY64 1035 aa7.22□□□□□ -1.25
CCDC6-203ENST00000518638 RTP2Q5QGT7 225 aa7.22□□□□□ -1.25
CCDC6-203ENST00000518638 C16orf86Q6ZW13 317 aa7.22□□□□□ -1.25
CCDC6-203ENST00000518638 RPAP2Q8IXW5 612 aaPredicted RBP7.22□□□□□ -1.25
CCDC6-203ENST00000518638 CPXCR1Q8N123 301 aa7.22□□□□□ -1.25
CCDC6-203ENST00000518638 ANKS4BQ8N8V4 417 aa7.22□□□□□ -1.25
CCDC6-203ENST00000518638 FAM133AQ8N9E0 248 aa7.22□□□□□ -1.25
CCDC6-203ENST00000518638 PRSS33Q8NF86 280 aa7.22□□□□□ -1.25
CCDC6-203ENST00000518638 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.22□□□□□ -1.25
CCDC6-203ENST00000518638 ARHGAP45Q92619 1136 aa7.22□□□□□ -1.25
CCDC6-203ENST00000518638 EDAQ92838 391 aa7.22□□□□□ -1.25
CCDC6-203ENST00000518638 FCRL2Q96LA5 508 aaPredicted RBP7.22□□□□□ -1.25
CCDC6-203ENST00000518638 MPHOSPH6Q99547 160 aaKnown RBP7.22□□□□□ -1.25
CCDC6-203ENST00000518638 MTG1Q9BT17 334 aaPredicted RBP7.22□□□□□ -1.25
CCDC6-203ENST00000518638 SLC6A17Q9H1V8 727 aa7.22□□□□□ -1.25
CCDC6-203ENST00000518638 SLC38A10Q9HBR0 1119 aa7.22□□□□□ -1.25
CCDC6-203ENST00000518638 TRMT13Q9NUP7 481 aaKnown RBP7.22□□□□□ -1.25
CCDC6-203ENST00000518638 EBF1Q9UH73 591 aa7.22□□□□□ -1.25
CCDC6-203ENST00000518638 FEM1BQ9UK73 627 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms