RNA–Protein interactions for RNA: ENST00000517875.5

LRRCC1-203, Transcript of leucine rich repeat and coiled-coil centrosomal protein 1, humanhuman

TSL 1 (best)

Gene LRRCC1, Length 2,385 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRCC1-203ENST00000517875 JAG2Q9Y219 1238 aa18.39■□□□□ 0.53
LRRCC1-203ENST00000517875 UTP11Q9Y3A2 253 aaKnown RBP18.39■□□□□ 0.53
LRRCC1-203ENST00000517875 PCDHB2Q9Y5E7 798 aa18.39■□□□□ 0.53
LRRCC1-203ENST00000517875 A0A1W2PQ67 120 aa18.38■□□□□ 0.53
LRRCC1-203ENST00000517875 TTC34A8MYJ7 566 aa18.38■□□□□ 0.53
LRRCC1-203ENST00000517875 HNRNPDQ14103 355 aaKnown RBP18.38■□□□□ 0.53
LRRCC1-203ENST00000517875 CYTH1Q15438 398 aa18.38■□□□□ 0.53
LRRCC1-203ENST00000517875 EPS8L3Q8TE67 593 aaKnown RBP18.38■□□□□ 0.53
LRRCC1-203ENST00000517875 ANKRD36BP1Q96IX9 119 aa18.38■□□□□ 0.53
LRRCC1-203ENST00000517875 PHF12Q96QT6 1004 aa18.38■□□□□ 0.53
LRRCC1-203ENST00000517875 STRBPQ96SI9 672 aaKnown RBP18.38■□□□□ 0.53
LRRCC1-203ENST00000517875 NEURL2Q9BR09 285 aa18.38■□□□□ 0.53
LRRCC1-203ENST00000517875 EMILIN3Q9NT22 766 aa18.38■□□□□ 0.53
LRRCC1-203ENST00000517875 CNOT7Q9UIV1 285 aaKnown RBP18.38■□□□□ 0.53
LRRCC1-203ENST00000517875 DENND2AQ9ULE3 1009 aa18.38■□□□□ 0.53
LRRCC1-203ENST00000517875 DOLKQ9UPQ8 538 aa18.38■□□□□ 0.53
LRRCC1-203ENST00000517875 TMA7Q9Y2S6 64 aaKnown RBP18.38■□□□□ 0.53
LRRCC1-203ENST00000517875 CCDC160A6NGH7 325 aa18.38■□□□□ 0.53
LRRCC1-203ENST00000517875 NDC80O14777 642 aa18.38■□□□□ 0.53
LRRCC1-203ENST00000517875 FBXO21O94952 628 aa18.38■□□□□ 0.53
LRRCC1-203ENST00000517875 TUFMP49411 452 aaKnown RBP18.38■□□□□ 0.53
LRRCC1-203ENST00000517875 CDC16Q13042 620 aa18.38■□□□□ 0.53
LRRCC1-203ENST00000517875 E2F2Q14209 437 aa18.38■□□□□ 0.53
LRRCC1-203ENST00000517875 SLC29A2Q14542 456 aa18.38■□□□□ 0.53
LRRCC1-203ENST00000517875 CNGA3Q16281 694 aa18.38■□□□□ 0.53
LRRCC1-203ENST00000517875 KCTD21Q4G0X4 260 aa18.38■□□□□ 0.53
LRRCC1-203ENST00000517875 ZNF658Q5TYW1 1059 aaPredicted RBP18.38■□□□□ 0.53
LRRCC1-203ENST00000517875 NCOA7Q8NI08 942 aa18.38■□□□□ 0.53
LRRCC1-203ENST00000517875 AP1M1Q9BXS5 423 aa18.38■□□□□ 0.53
LRRCC1-203ENST00000517875 CEP44Q9C0F1 390 aa18.38■□□□□ 0.53
LRRCC1-203ENST00000517875 LRRC37AA6NMS7 1700 aa18.38■□□□□ 0.53
LRRCC1-203ENST00000517875 MYH4Q9Y623 1939 aa18.37■□□□□ 0.53
LRRCC1-203ENST00000517875 DKC1O60832 514 aaKnown RBP eCLIP18.37■□□□□ 0.53
LRRCC1-203ENST00000517875 FGFR1OPO95684 399 aaKnown RBP18.37■□□□□ 0.53
LRRCC1-203ENST00000517875 PCSK6P29122 969 aa18.37■□□□□ 0.53
LRRCC1-203ENST00000517875 SLC1A4P43007 532 aa18.37■□□□□ 0.53
LRRCC1-203ENST00000517875 RPL5P46777 297 aaKnown RBP18.37■□□□□ 0.53
LRRCC1-203ENST00000517875 AUHQ13825 339 aaKnown RBP18.37■□□□□ 0.53
LRRCC1-203ENST00000517875 SHROOM1Q2M3G4 852 aaPredicted RBP18.37■□□□□ 0.53
LRRCC1-203ENST00000517875 RILPL1Q5EBL4 403 aa18.37■□□□□ 0.53
LRRCC1-203ENST00000517875 IL23RQ5VWK5 629 aa18.37■□□□□ 0.53
LRRCC1-203ENST00000517875 CCSAPQ6IQ19 270 aaPredicted RBP18.37■□□□□ 0.53
LRRCC1-203ENST00000517875 MFSD5Q6N075 450 aa18.37■□□□□ 0.53
LRRCC1-203ENST00000517875 RALYLQ86SE5 291 aaKnown RBP18.37■□□□□ 0.53
LRRCC1-203ENST00000517875 EBF3Q9H4W6 596 aa18.37■□□□□ 0.53
LRRCC1-203ENST00000517875 CD209Q9NNX6 404 aa18.37■□□□□ 0.53
LRRCC1-203ENST00000517875 MAGEC2Q9UBF1 373 aaPredicted RBP18.37■□□□□ 0.53
LRRCC1-203ENST00000517875 DMTF1Q9Y222 760 aa18.37■□□□□ 0.53
LRRCC1-203ENST00000517875 COQ6Q9Y2Z9 468 aa18.37■□□□□ 0.53
LRRCC1-203ENST00000517875 UNCXA6NJT0 531 aa18.37■□□□□ 0.53
LRRCC1-203ENST00000517875 CYTH3O43739 400 aa18.37■□□□□ 0.53
LRRCC1-203ENST00000517875 PGM3O95394 542 aa18.37■□□□□ 0.53
LRRCC1-203ENST00000517875 ANTXR2P58335 489 aa18.37■□□□□ 0.53
LRRCC1-203ENST00000517875 TUBA4AP68366 448 aa18.37■□□□□ 0.53
LRRCC1-203ENST00000517875 USP6NLQ92738 828 aa18.37■□□□□ 0.53
LRRCC1-203ENST00000517875 EPSTI1Q96J88 318 aa18.37■□□□□ 0.53
LRRCC1-203ENST00000517875 TUBGCP2Q9BSJ2 902 aa18.37■□□□□ 0.53
LRRCC1-203ENST00000517875 NT5C3AQ9H0P0 336 aa18.37■□□□□ 0.53
LRRCC1-203ENST00000517875 KIF13BQ9NQT8 1826 aa18.36■□□□□ 0.53
LRRCC1-203ENST00000517875 TRIM49BA6NDI0 452 aa18.36■□□□□ 0.53
LRRCC1-203ENST00000517875 KCNK3O14649 394 aa18.36■□□□□ 0.53
LRRCC1-203ENST00000517875 TRMUO75648 421 aaKnown RBP18.36■□□□□ 0.53
LRRCC1-203ENST00000517875 PLCB3Q01970 1234 aa18.36■□□□□ 0.53
LRRCC1-203ENST00000517875 MYLK3Q32MK0 819 aa18.36■□□□□ 0.53
LRRCC1-203ENST00000517875 VSTM1Q6UX27 236 aa18.36■□□□□ 0.53
LRRCC1-203ENST00000517875 TBC1D10CQ8IV04 446 aa18.36■□□□□ 0.53
LRRCC1-203ENST00000517875 DDHD1Q8NEL9 900 aa18.36■□□□□ 0.53
LRRCC1-203ENST00000517875 MAGEB18Q96M61 343 aa18.36■□□□□ 0.53
LRRCC1-203ENST00000517875 PITPNM3Q9BZ71 974 aa18.36■□□□□ 0.53
LRRCC1-203ENST00000517875 PLGRKTQ9HBL7 147 aa18.36■□□□□ 0.53
LRRCC1-203ENST00000517875 USP40Q9NVE5 1235 aa18.36■□□□□ 0.53
LRRCC1-203ENST00000517875 LRP2BPQ9P2M1 347 aa18.36■□□□□ 0.53
LRRCC1-203ENST00000517875 MTUS1Q9ULD2 1270 aa18.36■□□□□ 0.53
LRRCC1-203ENST00000517875 A0A088AWK7 358 aa18.35■□□□□ 0.53
LRRCC1-203ENST00000517875 PGRMC1O00264 195 aaKnown RBP18.35■□□□□ 0.53
LRRCC1-203ENST00000517875 MTRF1O75570 445 aaKnown RBP18.35■□□□□ 0.53
LRRCC1-203ENST00000517875 SLCO1A2P46721 670 aa18.35■□□□□ 0.53
LRRCC1-203ENST00000517875 BCAP31P51572 246 aa18.35■□□□□ 0.53
LRRCC1-203ENST00000517875 TUBA1BP68363 451 aa18.35■□□□□ 0.53
LRRCC1-203ENST00000517875 MED21Q13503 144 aa18.35■□□□□ 0.53
LRRCC1-203ENST00000517875 ARHGEF6Q15052 776 aa18.35■□□□□ 0.53
LRRCC1-203ENST00000517875 TUBA1AQ71U36 451 aa18.35■□□□□ 0.53
LRRCC1-203ENST00000517875 VASH1Q7L8A9 365 aaPredicted RBP18.35■□□□□ 0.53
LRRCC1-203ENST00000517875 CCDC82Q8N4S0 544 aa18.35■□□□□ 0.53
LRRCC1-203ENST00000517875 PIP4K2CQ8TBX8 421 aa18.35■□□□□ 0.53
LRRCC1-203ENST00000517875 ESR2Q92731 530 aa18.35■□□□□ 0.53
LRRCC1-203ENST00000517875 ARMT1Q9H993 441 aa18.35■□□□□ 0.53
LRRCC1-203ENST00000517875 MLXIPLQ9NP71 852 aa18.35■□□□□ 0.53
LRRCC1-203ENST00000517875 DBR1Q9UK59 544 aaKnown RBP18.35■□□□□ 0.53
LRRCC1-203ENST00000517875 PCDHB6Q9Y5E3 794 aa18.35■□□□□ 0.53
LRRCC1-203ENST00000517875 RASGRF2O14827 1237 aa18.35■□□□□ 0.53
LRRCC1-203ENST00000517875 PHBP35232 272 aa18.35■□□□□ 0.53
LRRCC1-203ENST00000517875 PRCPP42785 496 aa18.35■□□□□ 0.53
LRRCC1-203ENST00000517875 GFPT1Q06210 699 aaPredicted RBP18.35■□□□□ 0.53
LRRCC1-203ENST00000517875 DOK7Q18PE1 504 aa18.35■□□□□ 0.53
LRRCC1-203ENST00000517875 ASTE1Q2TB18 679 aaPredicted RBP18.35■□□□□ 0.53
LRRCC1-203ENST00000517875 DALRD3Q5D0E6 543 aaKnown RBP18.35■□□□□ 0.53
LRRCC1-203ENST00000517875 NLGN2Q8NFZ4 835 aa18.35■□□□□ 0.53
LRRCC1-203ENST00000517875 PYROXD1Q8WU10 500 aa18.35■□□□□ 0.53
LRRCC1-203ENST00000517875 HOXC10Q9NYD6 342 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms