RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 FBXL13Q8NEE6 735 aa11.49□□□□□ -0.57
PCDHGA1-202ENST00000517417 CFAP36Q96G28 342 aa11.49□□□□□ -0.57
PCDHGA1-202ENST00000517417 GGA2Q9UJY4 613 aa11.49□□□□□ -0.57
PCDHGA1-202ENST00000517417 AGO2Q9UKV8 859 aaKnown RBP11.49□□□□□ -0.57
PCDHGA1-202ENST00000517417 ALG6Q9Y672 507 aa11.49□□□□□ -0.57
PCDHGA1-202ENST00000517417 TJP3O95049 919 aa11.49□□□□□ -0.57
PCDHGA1-202ENST00000517417 ATP6V1G2O95670 118 aa11.49□□□□□ -0.57
PCDHGA1-202ENST00000517417 MAPK7Q13164 816 aa11.49□□□□□ -0.57
PCDHGA1-202ENST00000517417 QPCTQ16769 361 aa11.49□□□□□ -0.57
PCDHGA1-202ENST00000517417 COBLL1Q53SF7 1204 aa11.49□□□□□ -0.57
PCDHGA1-202ENST00000517417 HHIPL2Q6UWX4 724 aa11.49□□□□□ -0.57
PCDHGA1-202ENST00000517417 CATSPER3Q86XQ3 398 aa11.49□□□□□ -0.57
PCDHGA1-202ENST00000517417 TMEM143Q96AN5 459 aa11.49□□□□□ -0.57
PCDHGA1-202ENST00000517417 FAM167AQ96KS9 214 aa11.49□□□□□ -0.57
PCDHGA1-202ENST00000517417 SPATA33Q96N06 139 aa11.49□□□□□ -0.57
PCDHGA1-202ENST00000517417 FBXO28Q9NVF7 368 aa11.49□□□□□ -0.57
PCDHGA1-202ENST00000517417 CHORDC1Q9UHD1 332 aaPredicted RBP11.49□□□□□ -0.57
PCDHGA1-202ENST00000517417 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.49□□□□□ -0.57
PCDHGA1-202ENST00000517417 DISP2A7MBM2 1401 aa11.49□□□□□ -0.57
PCDHGA1-202ENST00000517417 IGF2BP3O00425 579 aaKnown RBP eCLIP11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 AKAP3O75969 853 aa11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 GNA15P30679 374 aa11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 GARSP41250 739 aaKnown RBP11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 KCNJ1P48048 391 aa11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 PRPSAP1Q14558 356 aa11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 PREPLQ4J6C6 727 aaPredicted RBP11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 RNF149Q8NC42 400 aa11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 TATDN2Q93075 761 aa11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 MTFR1LQ9H019 292 aa11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 DONSONQ9NYP3 566 aa11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 SLC9A2Q9UBY0 812 aa11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 APEX2Q9UBZ4 518 aa11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 ARL2BPQ9Y2Y0 163 aa11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 FIS1Q9Y3D6 152 aa11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 TMEM120BA0PK00 339 aa11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 SRRM3A6NNA2 597 aaPredicted RBP11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 RSPH10B2B2RC85 870 aa11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 H0Y3Z8 333 aa11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 BCL9O00512 1426 aa11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 LPXNO60711 386 aa11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 RSPH10BP0C881 870 aa11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 ASPHQ12797 758 aa11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 ITIH4Q14624 930 aa11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 COG2Q14746 738 aa11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 CENPUQ71F23 418 aa11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 SLC30A5Q8TAD4 765 aa11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 HDAC11Q96DB2 347 aa11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 WNT8AQ9H1J5 351 aa11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 ZNF70Q9UC06 446 aaPredicted RBP11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 RASA4BC9J798 803 aa11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 RBAK-RBAKDNI3L0D1 243 aa11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 RASA4O43374 803 aa11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 NOL3O60936 208 aaKnown RBP11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 GGPS1O95749 300 aa11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 MYL3P08590 195 aa11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 GHRP10912 638 aa11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 PPP4CP60510 307 aa11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 KRT17Q04695 432 aa11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 SH2D4BQ5SQS7 431 aa11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 KCNV1Q6PIU1 500 aa11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 COL23A1Q86Y22 540 aaPredicted RBP11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 EIF1ADQ8N9N8 165 aaKnown RBP11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 JPH1Q9HDC5 661 aaPredicted RBP11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 PFASO15067 1338 aa11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 KCPQ6ZWJ8 1503 aa11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 CASZ1Q86V15 1759 aa11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 OPLAHO14841 1288 aa11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 TOM1L1O75674 476 aa11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 FLT3P36888 993 aa11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 PHKA2P46019 1235 aa11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 TSTA3Q13630 321 aaPredicted RBP11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 NT5DC3Q86UY8 548 aa11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 YIPF3Q9GZM5 350 aa11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 GANQ9H2C0 597 aa11.48□□□□□ -0.57
PCDHGA1-202ENST00000517417 A0A0A6YYK5 440 aaPredicted RBP11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 F5H423 210 aaPredicted RBP11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 NR3C2P08235 984 aa11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 STAT5BP51692 787 aa11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 NPEPPSP55786 919 aa11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 RBBP5Q15291 538 aaKnown RBP11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 SMAD1Q15797 465 aaKnown RBP11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 RWDD4Q6NW29 188 aaKnown RBP11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 EPM2AIP1Q7L775 607 aaPredicted RBP11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 RNF139Q8WU17 664 aa11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 AGBL1Q96MI9 1066 aa11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 RIOX1Q9H6W3 641 aa11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 TOPORSQ9NS56 1045 aaPredicted RBP11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 PPP1R9AQ9ULJ8 1098 aa11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 DDX3XO00571 662 aaKnown RBP eCLIP11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 ATMINO43313 823 aaPredicted RBP11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 SMIM24O75264 130 aa11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 PLS3P13797 630 aa11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 COMTP21964 271 aa11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 GPC3P51654 580 aa11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 PTENP60484 403 aa11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 PSMC1P62191 440 aaKnown RBP11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 DDR1Q08345 913 aa11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 TTLL4Q14679 1199 aa11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 PLA2G4FQ68DD2 849 aa11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 CAPRIN2Q6IMN6 1127 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms