RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 POTEGQ6S5H5 508 aa13.99□□□□□ -0.17
TCOF1-214ENST00000515035 POTEEQ6S8J3 1075 aa13.99□□□□□ -0.17
TCOF1-214ENST00000515035 DDHD1Q8NEL9 900 aa13.99□□□□□ -0.17
TCOF1-214ENST00000515035 MDM1Q8TC05 714 aa13.99□□□□□ -0.17
TCOF1-214ENST00000515035 PPP1R16BQ96T49 567 aa13.99□□□□□ -0.17
TCOF1-214ENST00000515035 CD209Q9NNX6 404 aa13.99□□□□□ -0.17
TCOF1-214ENST00000515035 C20orf96Q9NUD7 363 aaPredicted RBP13.99□□□□□ -0.17
TCOF1-214ENST00000515035 FBXO2Q9UK22 296 aaPredicted RBP13.99□□□□□ -0.17
TCOF1-214ENST00000515035 PCDHA6Q9UN73 950 aa13.99□□□□□ -0.17
TCOF1-214ENST00000515035 PCDHA8Q9Y5H6 950 aa13.99□□□□□ -0.17
TCOF1-214ENST00000515035 ATXN8OSP0DMR3 200 aa13.99□□□□□ -0.17
TCOF1-214ENST00000515035 CDH2P19022 906 aaPredicted RBP13.99□□□□□ -0.17
TCOF1-214ENST00000515035 CPA2P48052 419 aa13.99□□□□□ -0.17
TCOF1-214ENST00000515035 ORC2Q13416 577 aaPredicted RBP13.99□□□□□ -0.17
TCOF1-214ENST00000515035 GJC2Q5T442 439 aaPredicted RBP13.99□□□□□ -0.17
TCOF1-214ENST00000515035 ACBD5Q5T8D3 534 aaPredicted RBP13.99□□□□□ -0.17
TCOF1-214ENST00000515035 KDM7AQ6ZMT4 941 aa13.99□□□□□ -0.17
TCOF1-214ENST00000515035 MIGA2Q7L4E1 593 aa13.99□□□□□ -0.17
TCOF1-214ENST00000515035 FRMD5Q7Z6J6 570 aa13.99□□□□□ -0.17
TCOF1-214ENST00000515035 NUP93Q8N1F7 819 aa13.99□□□□□ -0.17
TCOF1-214ENST00000515035 ZNF280CQ8ND82 737 aa13.99□□□□□ -0.17
TCOF1-214ENST00000515035 OR6P1Q8NGX9 317 aa13.99□□□□□ -0.17
TCOF1-214ENST00000515035 SARS2Q9NP81 518 aaKnown RBP13.99□□□□□ -0.17
TCOF1-214ENST00000515035 BNIP3LO60238 219 aa13.99□□□□□ -0.17
TCOF1-214ENST00000515035 ECE2O60344 883 aa13.99□□□□□ -0.17
TCOF1-214ENST00000515035 PRELPP51888 382 aa13.99□□□□□ -0.17
TCOF1-214ENST00000515035 C1orf228Q6PIY5 440 aa13.99□□□□□ -0.17
TCOF1-214ENST00000515035 IFNEQ86WN2 208 aa13.99□□□□□ -0.17
TCOF1-214ENST00000515035 ABI1Q8IZP0 508 aa13.99□□□□□ -0.17
TCOF1-214ENST00000515035 SLC35G2Q8TBE7 412 aa13.99□□□□□ -0.17
TCOF1-214ENST00000515035 CAAP1Q9H8G2 361 aa13.99□□□□□ -0.17
TCOF1-214ENST00000515035 EML4Q9HC35 981 aaKnown RBP13.99□□□□□ -0.17
TCOF1-214ENST00000515035 FHOD1Q9Y613 1164 aa13.99□□□□□ -0.17
TCOF1-214ENST00000515035 EMSYQ7Z589 1322 aa13.99□□□□□ -0.17
TCOF1-214ENST00000515035 RTN2O75298 545 aa13.99□□□□□ -0.17
TCOF1-214ENST00000515035 TMCC1O94876 653 aa13.99□□□□□ -0.17
TCOF1-214ENST00000515035 SLC1A1P43005 524 aa13.99□□□□□ -0.17
TCOF1-214ENST00000515035 EIF3EP60228 445 aaKnown RBP13.99□□□□□ -0.17
TCOF1-214ENST00000515035 EN1Q05925 392 aaPredicted RBP13.99□□□□□ -0.17
TCOF1-214ENST00000515035 RCN1Q15293 331 aa13.99□□□□□ -0.17
TCOF1-214ENST00000515035 ITPRIPL1Q6GPH6 555 aa13.99□□□□□ -0.17
TCOF1-214ENST00000515035 FAM20AQ96MK3 541 aa13.99□□□□□ -0.17
TCOF1-214ENST00000515035 NEUROG2Q9H2A3 272 aa13.99□□□□□ -0.17
TCOF1-214ENST00000515035 SEL1LQ9UBV2 794 aa13.99□□□□□ -0.17
TCOF1-214ENST00000515035 CHMP2BQ9UQN3 213 aa13.99□□□□□ -0.17
TCOF1-214ENST00000515035 NEU2Q9Y3R4 380 aa13.99□□□□□ -0.17
TCOF1-214ENST00000515035 E7ENQ6 273 aa13.98□□□□□ -0.17
TCOF1-214ENST00000515035 CLK1P49759 484 aaKnown RBP13.98□□□□□ -0.17
TCOF1-214ENST00000515035 ABCE1P61221 599 aaKnown RBP13.98□□□□□ -0.17
TCOF1-214ENST00000515035 Q3C1V9 767 aa13.98□□□□□ -0.17
TCOF1-214ENST00000515035 ENOSF1Q7L5Y1 443 aa13.98□□□□□ -0.17
TCOF1-214ENST00000515035 LRRC34Q8IZ02 419 aa13.98□□□□□ -0.17
TCOF1-214ENST00000515035 SYNE4Q8N205 404 aa13.98□□□□□ -0.17
TCOF1-214ENST00000515035 SPATA17Q96L03 361 aa13.98□□□□□ -0.17
TCOF1-214ENST00000515035 GPR101Q96P66 508 aaPredicted RBP13.98□□□□□ -0.17
TCOF1-214ENST00000515035 PNKPQ96T60 521 aa13.98□□□□□ -0.17
TCOF1-214ENST00000515035 TMEM47Q9BQJ4 181 aa13.98□□□□□ -0.17
TCOF1-214ENST00000515035 MTA3Q9BTC8 594 aa13.98□□□□□ -0.17
TCOF1-214ENST00000515035 ISCA1Q9BUE6 129 aa13.98□□□□□ -0.17
TCOF1-214ENST00000515035 PPCSQ9HAB8 311 aa13.98□□□□□ -0.17
TCOF1-214ENST00000515035 NDUFA13Q9P0J0 144 aa13.98□□□□□ -0.17
TCOF1-214ENST00000515035 USP17L15C9J2P7 530 aa13.98□□□□□ -0.17
TCOF1-214ENST00000515035 USP17L13C9JLJ4 530 aa13.98□□□□□ -0.17
TCOF1-214ENST00000515035 USP17L11C9JVI0 530 aa13.98□□□□□ -0.17
TCOF1-214ENST00000515035 USP17L18D6R9N7 530 aa13.98□□□□□ -0.17
TCOF1-214ENST00000515035 USP17L22D6RA61 530 aa13.98□□□□□ -0.17
TCOF1-214ENST00000515035 USP17L17D6RBQ6 530 aa13.98□□□□□ -0.17
TCOF1-214ENST00000515035 USP17L19D6RCP7 530 aa13.98□□□□□ -0.17
TCOF1-214ENST00000515035 USP17L20D6RJB6 530 aa13.98□□□□□ -0.17
TCOF1-214ENST00000515035 M0QYV0 167 aa13.98□□□□□ -0.17
TCOF1-214ENST00000515035 KCNQ2O43526 872 aa13.98□□□□□ -0.17
TCOF1-214ENST00000515035 TBC1D4O60343 1298 aa13.98□□□□□ -0.17
TCOF1-214ENST00000515035 NQO1P15559 274 aaKnown RBP13.98□□□□□ -0.17
TCOF1-214ENST00000515035 SNAP25P60880 206 aa13.98□□□□□ -0.17
TCOF1-214ENST00000515035 RUNX1T1Q06455 604 aa13.98□□□□□ -0.17
TCOF1-214ENST00000515035 USP17L24Q0WX57 530 aa13.98□□□□□ -0.17
TCOF1-214ENST00000515035 USP17L6PQ6QN14 398 aa13.98□□□□□ -0.17
TCOF1-214ENST00000515035 IFT43Q96FT9 208 aa13.98□□□□□ -0.17
TCOF1-214ENST00000515035 PARVAQ9NVD7 372 aa13.98□□□□□ -0.17
TCOF1-214ENST00000515035 ARHGEF37A1IGU5 675 aa13.98□□□□□ -0.17
TCOF1-214ENST00000515035 RSPH10B2B2RC85 870 aa13.98□□□□□ -0.17
TCOF1-214ENST00000515035 NFIBO00712 420 aa13.98□□□□□ -0.17
TCOF1-214ENST00000515035 RSPH10BP0C881 870 aa13.98□□□□□ -0.17
TCOF1-214ENST00000515035 H2AFXP16104 143 aaPredicted RBP13.98□□□□□ -0.17
TCOF1-214ENST00000515035 TCN1P20061 433 aaPredicted RBP13.98□□□□□ -0.17
TCOF1-214ENST00000515035 VCPP55072 806 aaKnown RBP13.98□□□□□ -0.17
TCOF1-214ENST00000515035 SESN2P58004 480 aaPredicted RBP13.98□□□□□ -0.17
TCOF1-214ENST00000515035 LAMB3Q13751 1172 aa13.98□□□□□ -0.17
TCOF1-214ENST00000515035 MTHFD1LQ6UB35 978 aa13.98□□□□□ -0.17
TCOF1-214ENST00000515035 MICU2Q8IYU8 434 aa13.98□□□□□ -0.17
TCOF1-214ENST00000515035 ADSSL1Q8N142 457 aa13.98□□□□□ -0.17
TCOF1-214ENST00000515035 EGFL8Q99944 293 aa13.98□□□□□ -0.17
TCOF1-214ENST00000515035 MOV10L1Q9BXT6 1211 aaKnown RBP13.98□□□□□ -0.17
TCOF1-214ENST00000515035 DHX35Q9H5Z1 703 aaKnown RBP13.98□□□□□ -0.17
TCOF1-214ENST00000515035 LOC100653049A0A140TA62 436 aa13.98□□□□□ -0.17
TCOF1-214ENST00000515035 DENND3A2RUS2 1198 aa13.98□□□□□ -0.17
TCOF1-214ENST00000515035 SYNDIG1LA6NDD5 238 aa13.98□□□□□ -0.17
TCOF1-214ENST00000515035 ZBTB5O15062 677 aa13.98□□□□□ -0.17
TCOF1-214ENST00000515035 KRT34O76011 436 aa13.98□□□□□ -0.17
TCOF1-214ENST00000515035 GNAT1P11488 350 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms