RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 SMURF2Q9HAU4 748 aa6.24□□□□□ -1.41
RFC1-216ENST00000514572 PCMTD2Q9NV79 361 aa6.24□□□□□ -1.41
RFC1-216ENST00000514572 SIDT1Q9NXL6 827 aaKnown RBP6.24□□□□□ -1.41
RFC1-216ENST00000514572 MYO1AQ9UBC5 1043 aa6.24□□□□□ -1.41
RFC1-216ENST00000514572 AFF4Q9UHB7 1163 aaKnown RBP6.24□□□□□ -1.41
RFC1-216ENST00000514572 CPA4Q9UI42 421 aa6.24□□□□□ -1.41
RFC1-216ENST00000514572 AJAP1Q9UKB5 411 aaPredicted RBP6.24□□□□□ -1.41
RFC1-216ENST00000514572 PCDHA6Q9UN73 950 aa6.24□□□□□ -1.41
RFC1-216ENST00000514572 PCDHA1Q9Y5I3 950 aa6.24□□□□□ -1.41
RFC1-216ENST00000514572 C2orf78A6NCI8 922 aa6.23□□□□□ -1.41
RFC1-216ENST00000514572 TRIM43BA6NCK2 446 aa6.23□□□□□ -1.41
RFC1-216ENST00000514572 APOL1O14791 398 aa6.23□□□□□ -1.41
RFC1-216ENST00000514572 PLA2G6O60733 806 aa6.23□□□□□ -1.41
RFC1-216ENST00000514572 CYP7B1O75881 506 aa6.23□□□□□ -1.41
RFC1-216ENST00000514572 THP07101 528 aa6.23□□□□□ -1.41
RFC1-216ENST00000514572 HARSP12081 509 aaKnown RBP6.23□□□□□ -1.41
RFC1-216ENST00000514572 PFKLP17858 780 aa6.23□□□□□ -1.41
RFC1-216ENST00000514572 PDIA3P30101 505 aaKnown RBP6.23□□□□□ -1.41
RFC1-216ENST00000514572 TECP42680 631 aa6.23□□□□□ -1.41
RFC1-216ENST00000514572 CCT5P48643 541 aa6.23□□□□□ -1.41
RFC1-216ENST00000514572 KCNQ1P51787 676 aa6.23□□□□□ -1.41
RFC1-216ENST00000514572 ICA1Q05084 483 aa6.23□□□□□ -1.41
RFC1-216ENST00000514572 GALNT1Q10472 559 aaPredicted RBP6.23□□□□□ -1.41
RFC1-216ENST00000514572 PUM3Q15397 648 aaKnown RBP6.23□□□□□ -1.41
RFC1-216ENST00000514572 KHDC1LQ5JSQ8 128 aa6.23□□□□□ -1.41
RFC1-216ENST00000514572 KLHDC7AQ5VTJ3 777 aa6.23□□□□□ -1.41
RFC1-216ENST00000514572 ZNF605Q86T29 641 aa6.23□□□□□ -1.41
RFC1-216ENST00000514572 ZNF354CQ86Y25 554 aa6.23□□□□□ -1.41
RFC1-216ENST00000514572 PLXDC1Q8IUK5 500 aa6.23□□□□□ -1.41
RFC1-216ENST00000514572 MZB1Q8WU39 189 aa6.23□□□□□ -1.41
RFC1-216ENST00000514572 TRIM43Q96BQ3 446 aaPredicted RBP6.23□□□□□ -1.41
RFC1-216ENST00000514572 STK33Q9BYT3 514 aa6.23□□□□□ -1.41
RFC1-216ENST00000514572 SARS2Q9NP81 518 aaKnown RBP6.23□□□□□ -1.41
RFC1-216ENST00000514572 CROTQ9UKG9 612 aa6.23□□□□□ -1.41
RFC1-216ENST00000514572 PRSS29PA6NIE9 313 aa6.22□□□□□ -1.41
RFC1-216ENST00000514572 AHSGP02765 367 aa6.22□□□□□ -1.41
RFC1-216ENST00000514572 HMGCRP04035 888 aa6.22□□□□□ -1.41
RFC1-216ENST00000514572 ALOX15P16050 662 aaPredicted RBP6.22□□□□□ -1.41
RFC1-216ENST00000514572 ITGB5P18084 799 aa6.22□□□□□ -1.41
RFC1-216ENST00000514572 FGFR2P21802 821 aa6.22□□□□□ -1.41
RFC1-216ENST00000514572 KIR2DL3P43628 341 aa6.22□□□□□ -1.41
RFC1-216ENST00000514572 MAPK10P53779 464 aa6.22□□□□□ -1.41
RFC1-216ENST00000514572 PER3P56645 1201 aa6.22□□□□□ -1.41
RFC1-216ENST00000514572 ADAM8P78325 824 aa6.22□□□□□ -1.41
RFC1-216ENST00000514572 SP140Q13342 867 aa6.22□□□□□ -1.41
RFC1-216ENST00000514572 BIRC3Q13489 604 aa6.22□□□□□ -1.41
RFC1-216ENST00000514572 BLMHQ13867 455 aa6.22□□□□□ -1.41
RFC1-216ENST00000514572 CIAPIN1Q6FI81 312 aa6.22□□□□□ -1.41
RFC1-216ENST00000514572 LVRNQ6Q4G3 990 aa6.22□□□□□ -1.41
RFC1-216ENST00000514572 CLEC4GQ6UXB4 293 aa6.22□□□□□ -1.41
RFC1-216ENST00000514572 MICU3Q86XE3 530 aa6.22□□□□□ -1.41
RFC1-216ENST00000514572 CACNA2D3Q8IZS8 1091 aa6.22□□□□□ -1.41
RFC1-216ENST00000514572 CCDC33Q8N5R6 958 aa6.22□□□□□ -1.41
RFC1-216ENST00000514572 MYCT1Q8N699 235 aa6.22□□□□□ -1.41
RFC1-216ENST00000514572 ATP11CQ8NB49 1132 aa6.22□□□□□ -1.41
RFC1-216ENST00000514572 REPS2Q8NFH8 660 aa6.22□□□□□ -1.41
RFC1-216ENST00000514572 CCT6BQ92526 530 aa6.22□□□□□ -1.41
RFC1-216ENST00000514572 LIN37Q96GY3 246 aaPredicted RBP6.22□□□□□ -1.41
RFC1-216ENST00000514572 P2RX7Q99572 595 aaKnown RBP6.22□□□□□ -1.41
RFC1-216ENST00000514572 GDF15Q99988 308 aa6.22□□□□□ -1.41
RFC1-216ENST00000514572 C1orf43Q9BWL3 253 aa6.22□□□□□ -1.41
RFC1-216ENST00000514572 KRTAP9-2Q9BYQ4 174 aa6.22□□□□□ -1.41
RFC1-216ENST00000514572 MYLK2Q9H1R3 596 aa6.22□□□□□ -1.41
RFC1-216ENST00000514572 TMEM140Q9NV12 185 aa6.22□□□□□ -1.41
RFC1-216ENST00000514572 ING3Q9NXR8 418 aa6.22□□□□□ -1.41
RFC1-216ENST00000514572 ZDHHC8Q9ULC8 765 aa6.22□□□□□ -1.41
RFC1-216ENST00000514572 ZNF503-AS2A6NEH8 195 aa6.21□□□□□ -1.42
RFC1-216ENST00000514572 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.21□□□□□ -1.42
RFC1-216ENST00000514572 CSTBP04080 98 aaKnown RBP6.21□□□□□ -1.42
RFC1-216ENST00000514572 CD1AP06126 327 aa6.21□□□□□ -1.42
RFC1-216ENST00000514572 HSD3B1P14060 373 aa6.21□□□□□ -1.42
RFC1-216ENST00000514572 GYPEP15421 78 aa6.21□□□□□ -1.42
RFC1-216ENST00000514572 HDCP19113 662 aa6.21□□□□□ -1.42
RFC1-216ENST00000514572 SMARCA1P28370 1054 aa6.21□□□□□ -1.42
RFC1-216ENST00000514572 PIK3CGP48736 1102 aa6.21□□□□□ -1.42
RFC1-216ENST00000514572 EPHB3P54753 998 aa6.21□□□□□ -1.42
RFC1-216ENST00000514572 SOX8P57073 446 aa6.21□□□□□ -1.42
RFC1-216ENST00000514572 RPS16P62249 146 aaKnown RBP6.21□□□□□ -1.42
RFC1-216ENST00000514572 FOXO4P98177 505 aa6.21□□□□□ -1.42
RFC1-216ENST00000514572 KCNMB1Q16558 191 aa6.21□□□□□ -1.42
RFC1-216ENST00000514572 PRAMEF14Q5SWL7 426 aa6.21□□□□□ -1.42
RFC1-216ENST00000514572 CCDC70Q6NSX1 233 aa6.21□□□□□ -1.42
RFC1-216ENST00000514572 PGBD2Q6P3X8 592 aa6.21□□□□□ -1.42
RFC1-216ENST00000514572 REXO1L1PQ8IX06 675 aa6.21□□□□□ -1.42
RFC1-216ENST00000514572 SYTL1Q8IYJ3 562 aa6.21□□□□□ -1.42
RFC1-216ENST00000514572 PLA2G15Q8NCC3 412 aa6.21□□□□□ -1.42
RFC1-216ENST00000514572 GIMAP8Q8ND71 665 aaPredicted RBP6.21□□□□□ -1.42
RFC1-216ENST00000514572 NUDT10Q8NFP7 164 aa6.21□□□□□ -1.42
RFC1-216ENST00000514572 LPPQ93052 612 aa6.21□□□□□ -1.42
RFC1-216ENST00000514572 GCC1Q96CN9 775 aa6.21□□□□□ -1.42
RFC1-216ENST00000514572 NUDT11Q96G61 164 aa6.21□□□□□ -1.42
RFC1-216ENST00000514572 UHRF1Q96T88 793 aaPredicted RBP6.21□□□□□ -1.42
RFC1-216ENST00000514572 SENP7Q9BQF6 1050 aa6.21□□□□□ -1.42
RFC1-216ENST00000514572 SENP6Q9GZR1 1112 aaPredicted RBP6.21□□□□□ -1.42
RFC1-216ENST00000514572 ENKD1Q9H0I2 346 aa6.21□□□□□ -1.42
RFC1-216ENST00000514572 KCNH6Q9H252 994 aa6.21□□□□□ -1.42
RFC1-216ENST00000514572 CNNM1Q9NRU3 951 aa6.21□□□□□ -1.42
RFC1-216ENST00000514572 SIRT5Q9NXA8 310 aa6.21□□□□□ -1.42
RFC1-216ENST00000514572 C9orf78Q9NZ63 289 aaPredicted RBP6.21□□□□□ -1.42
RFC1-216ENST00000514572 GJD2Q9UKL4 321 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms