RNA–Protein interactions for RNA: ENST00000514552.5

PDE4D-222, Transcript of phosphodiesterase 4D, humanhuman

TSL 3

Gene PDE4D, Length 494 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-222ENST00000514552 AS3MTQ9HBK9 375 aa8.21□□□□□ -1.1
PDE4D-222ENST00000514552 NGRNQ9NPE2 291 aaKnown RBP8.21□□□□□ -1.1
PDE4D-222ENST00000514552 CD320Q9NPF0 282 aa8.21□□□□□ -1.1
PDE4D-222ENST00000514552 PI4KBQ9UBF8 816 aa8.21□□□□□ -1.1
PDE4D-222ENST00000514552 COQ6Q9Y2Z9 468 aa8.21□□□□□ -1.1
PDE4D-222ENST00000514552 NR2E3Q9Y5X4 410 aa8.21□□□□□ -1.1
PDE4D-222ENST00000514552 A0A0C4DFX4 3053 aa8.21□□□□□ -1.1
PDE4D-222ENST00000514552 SIPA1L1O43166 1804 aa8.2□□□□□ -1.1
PDE4D-222ENST00000514552 TCRBV5S4A2TA0A5A2 114 aa8.2□□□□□ -1.1
PDE4D-222ENST00000514552 H0YGN5 161 aa8.2□□□□□ -1.1
PDE4D-222ENST00000514552 ZNF561-AS1K7EIQ3 104 aa8.2□□□□□ -1.1
PDE4D-222ENST00000514552 BUB1BO60566 1050 aaPredicted RBP8.2□□□□□ -1.1
PDE4D-222ENST00000514552 SGPL1O95470 568 aa8.2□□□□□ -1.1
PDE4D-222ENST00000514552 ASNSP08243 561 aa8.2□□□□□ -1.1
PDE4D-222ENST00000514552 C1QTNF9P0C862 333 aa8.2□□□□□ -1.1
PDE4D-222ENST00000514552 RAP1GAPP47736 663 aa8.2□□□□□ -1.1
PDE4D-222ENST00000514552 FLT3LGP49771 235 aa8.2□□□□□ -1.1
PDE4D-222ENST00000514552 EPHA5P54756 1037 aa8.2□□□□□ -1.1
PDE4D-222ENST00000514552 OVCH1Q7RTY7 1134 aa8.2□□□□□ -1.1
PDE4D-222ENST00000514552 B3GNT8Q7Z7M8 397 aa8.2□□□□□ -1.1
PDE4D-222ENST00000514552 OSTM1Q86WC4 334 aa8.2□□□□□ -1.1
PDE4D-222ENST00000514552 TEX11Q8IYF3 940 aa8.2□□□□□ -1.1
PDE4D-222ENST00000514552 IGSF22Q8N9C0 903 aa8.2□□□□□ -1.1
PDE4D-222ENST00000514552 SSH3Q8TE77 659 aa8.2□□□□□ -1.1
PDE4D-222ENST00000514552 SH3RF2Q8TEC5 729 aa8.2□□□□□ -1.1
PDE4D-222ENST00000514552 NEUROD6Q96NK8 337 aa8.2□□□□□ -1.1
PDE4D-222ENST00000514552 YIPF4Q9BSR8 244 aa8.2□□□□□ -1.1
PDE4D-222ENST00000514552 PRO3102Q9H379 93 aa8.2□□□□□ -1.1
PDE4D-222ENST00000514552 RAI14Q9P0K7 980 aa8.2□□□□□ -1.1
PDE4D-222ENST00000514552 MORF4L1Q9UBU8 362 aa8.2□□□□□ -1.1
PDE4D-222ENST00000514552 SRPK3Q9UPE1 567 aa8.2□□□□□ -1.1
PDE4D-222ENST00000514552 IRAK3Q9Y616 596 aa8.2□□□□□ -1.1
PDE4D-222ENST00000514552 PNMA6EA0A0J9YXQ4 647 aa8.19□□□□□ -1.1
PDE4D-222ENST00000514552 HMGCRP04035 888 aa8.19□□□□□ -1.1
PDE4D-222ENST00000514552 AMY2AP04746 511 aa8.19□□□□□ -1.1
PDE4D-222ENST00000514552 ATF2P15336 505 aa8.19□□□□□ -1.1
PDE4D-222ENST00000514552 AMY2BP19961 511 aa8.19□□□□□ -1.1
PDE4D-222ENST00000514552 HOXA7P31268 230 aaPredicted RBP8.19□□□□□ -1.1
PDE4D-222ENST00000514552 GYS2P54840 703 aa8.19□□□□□ -1.1
PDE4D-222ENST00000514552 JAM2P57087 298 aa8.19□□□□□ -1.1
PDE4D-222ENST00000514552 TUSC3Q13454 348 aa8.19□□□□□ -1.1
PDE4D-222ENST00000514552 ZNF460Q14592 562 aa8.19□□□□□ -1.1
PDE4D-222ENST00000514552 FIGNQ5HY92 759 aa8.19□□□□□ -1.1
PDE4D-222ENST00000514552 CCDC158Q5M9N0 1113 aa8.19□□□□□ -1.1
PDE4D-222ENST00000514552 TREML2Q5T2D2 321 aa8.19□□□□□ -1.1
PDE4D-222ENST00000514552 ZKSCAN2Q63HK3 967 aa8.19□□□□□ -1.1
PDE4D-222ENST00000514552 NAA16Q6N069 864 aaPredicted RBP8.19□□□□□ -1.1
PDE4D-222ENST00000514552 UBE2R2Q712K3 238 aaPredicted RBP8.19□□□□□ -1.1
PDE4D-222ENST00000514552 KCTD1Q719H9 257 aa8.19□□□□□ -1.1
PDE4D-222ENST00000514552 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.19□□□□□ -1.1
PDE4D-222ENST00000514552 ZC3H18Q86VM9 953 aaKnown RBP8.19□□□□□ -1.1
PDE4D-222ENST00000514552 DHX37Q8IY37 1157 aaKnown RBP8.19□□□□□ -1.1
PDE4D-222ENST00000514552 ANKRD13CQ8N6S4 541 aa8.19□□□□□ -1.1
PDE4D-222ENST00000514552 CLEC4DQ8WXI8 215 aa8.19□□□□□ -1.1
PDE4D-222ENST00000514552 PCDH18Q9HCL0 1135 aa8.19□□□□□ -1.1
PDE4D-222ENST00000514552 DTLQ9NZJ0 730 aa8.19□□□□□ -1.1
PDE4D-222ENST00000514552 SAMD15Q9P1V8 674 aa8.19□□□□□ -1.1
PDE4D-222ENST00000514552 GABRQQ9UN88 632 aa8.19□□□□□ -1.1
PDE4D-222ENST00000514552 SMG5Q9UPR3 1016 aaKnown RBP8.19□□□□□ -1.1
PDE4D-222ENST00000514552 FAN1Q9Y2M0 1017 aa8.19□□□□□ -1.1
PDE4D-222ENST00000514552 FPGT-TNNI3KV9GXZ4 949 aa8.19□□□□□ -1.1
PDE4D-222ENST00000514552 FLT1P17948 1338 aa8.19□□□□□ -1.1
PDE4D-222ENST00000514552 COL6A3P12111 3177 aa8.19□□□□□ -1.1
PDE4D-222ENST00000514552 DDX60LQ5H9U9 1706 aaKnown RBP8.18□□□□□ -1.1
PDE4D-222ENST00000514552 C19orf81C9J6K1 198 aa8.18□□□□□ -1.1
PDE4D-222ENST00000514552 C8AP07357 584 aa8.18□□□□□ -1.1
PDE4D-222ENST00000514552 POU3F2P20265 443 aaPredicted RBP8.18□□□□□ -1.1
PDE4D-222ENST00000514552 HMGCS2P54868 508 aa8.18□□□□□ -1.1
PDE4D-222ENST00000514552 BACE1P56817 501 aa8.18□□□□□ -1.1
PDE4D-222ENST00000514552 SPP2Q13103 211 aa8.18□□□□□ -1.1
PDE4D-222ENST00000514552 TM4SF20Q53R12 229 aa8.18□□□□□ -1.1
PDE4D-222ENST00000514552 TMEM177Q53S58 311 aa8.18□□□□□ -1.1
PDE4D-222ENST00000514552 TTC39AQ5SRH9 613 aa8.18□□□□□ -1.1
PDE4D-222ENST00000514552 EGFLAMQ63HQ2 1017 aa8.18□□□□□ -1.1
PDE4D-222ENST00000514552 LRRTM3Q86VH5 581 aa8.18□□□□□ -1.1
PDE4D-222ENST00000514552 FOXP4Q8IVH2 680 aaPredicted RBP8.18□□□□□ -1.1
PDE4D-222ENST00000514552 CISD2Q8N5K1 135 aaKnown RBP8.18□□□□□ -1.1
PDE4D-222ENST00000514552 SH3RF3Q8TEJ3 882 aaPredicted RBP8.18□□□□□ -1.1
PDE4D-222ENST00000514552 SOCS4Q8WXH5 440 aa8.18□□□□□ -1.1
PDE4D-222ENST00000514552 TOE1Q96GM8 510 aaKnown RBP8.18□□□□□ -1.1
PDE4D-222ENST00000514552 SMURF1Q9HCE7 757 aa8.18□□□□□ -1.1
PDE4D-222ENST00000514552 HSPBP1Q9NZL4 362 aa8.18□□□□□ -1.1
PDE4D-222ENST00000514552 NOP58Q9Y2X3 529 aaKnown RBP8.18□□□□□ -1.1
PDE4D-222ENST00000514552 CDK5RAP2Q96SN8 1893 aa8.17□□□□□ -1.1
PDE4D-222ENST00000514552 DNAH12Q6ZR08 3092 aa8.17□□□□□ -1.1
PDE4D-222ENST00000514552 LAMA2P24043 3122 aaKnown RBP8.17□□□□□ -1.1
PDE4D-222ENST00000514552 MAN2B1O00754 1011 aa8.17□□□□□ -1.1
PDE4D-222ENST00000514552 HLA-DOAP06340 250 aa8.17□□□□□ -1.1
PDE4D-222ENST00000514552 JMJD7P0C870 316 aa8.17□□□□□ -1.1
PDE4D-222ENST00000514552 KRT15P19012 456 aa8.17□□□□□ -1.1
PDE4D-222ENST00000514552 MAPK4P31152 587 aa8.17□□□□□ -1.1
PDE4D-222ENST00000514552 MC3RP41968 323 aa8.17□□□□□ -1.1
PDE4D-222ENST00000514552 IRX3P78415 501 aaPredicted RBP8.17□□□□□ -1.1
PDE4D-222ENST00000514552 ATP8B2P98198 1209 aa8.17□□□□□ -1.1
PDE4D-222ENST00000514552 EP400NLQ6ZTU2 488 aa8.17□□□□□ -1.1
PDE4D-222ENST00000514552 PTRH1Q86Y79 214 aaKnown RBP8.17□□□□□ -1.1
PDE4D-222ENST00000514552 DDX1Q92499 740 aaKnown RBP8.17□□□□□ -1.1
PDE4D-222ENST00000514552 FRAT1Q92837 279 aaPredicted RBP8.17□□□□□ -1.1
PDE4D-222ENST00000514552 DDX11Q96FC9 970 aa8.17□□□□□ -1.1
PDE4D-222ENST00000514552 DEFB118Q96PH6 123 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms