RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 MAN1C1Q9NR34 630 aa14.53□□□□□ -0.08
RNF4-215ENST00000511843 TSHZ2Q9NRE2 1034 aa14.53□□□□□ -0.08
RNF4-215ENST00000511843 TOPORSQ9NS56 1045 aaPredicted RBP14.53□□□□□ -0.08
RNF4-215ENST00000511843 STK39Q9UEW8 545 aa14.53□□□□□ -0.08
RNF4-215ENST00000511843 MORC2Q9Y6X9 1032 aaPredicted RBP14.53□□□□□ -0.08
RNF4-215ENST00000511843 LOC730098B7Z3J9 87 aa14.52□□□□□ -0.09
RNF4-215ENST00000511843 PI4K2BG5E9Z4 385 aa14.52□□□□□ -0.09
RNF4-215ENST00000511843 H0YCG3 227 aa14.52□□□□□ -0.09
RNF4-215ENST00000511843 B3GAT3O94766 335 aa14.52□□□□□ -0.09
RNF4-215ENST00000511843 ADH1AP07327 375 aa14.52□□□□□ -0.09
RNF4-215ENST00000511843 BRCC3P46736 316 aa14.52□□□□□ -0.09
RNF4-215ENST00000511843 MCL1Q07820 350 aa14.52□□□□□ -0.09
RNF4-215ENST00000511843 SLC10A6Q3KNW5 377 aa14.52□□□□□ -0.09
RNF4-215ENST00000511843 XKR4Q5GH76 650 aa14.52□□□□□ -0.09
RNF4-215ENST00000511843 CES5AQ6NT32 575 aa14.52□□□□□ -0.09
RNF4-215ENST00000511843 SHC4Q6S5L8 630 aa14.52□□□□□ -0.09
RNF4-215ENST00000511843 CCDC73Q6ZRK6 1079 aa14.52□□□□□ -0.09
RNF4-215ENST00000511843 SV2BQ7L1I2 683 aa14.52□□□□□ -0.09
RNF4-215ENST00000511843 PPFIBP1Q86W92 1011 aa14.52□□□□□ -0.09
RNF4-215ENST00000511843 RNF135Q8IUD6 432 aa14.52□□□□□ -0.09
RNF4-215ENST00000511843 RXFP1Q9HBX9 757 aa14.52□□□□□ -0.09
RNF4-215ENST00000511843 C11orf16Q9NQ32 467 aa14.52□□□□□ -0.09
RNF4-215ENST00000511843 DZANK1Q9NVP4 752 aa14.52□□□□□ -0.09
RNF4-215ENST00000511843 CNTN3Q9P232 1028 aa14.52□□□□□ -0.09
RNF4-215ENST00000511843 RAPGEFL1Q9UHV5 662 aa14.52□□□□□ -0.09
RNF4-215ENST00000511843 MUTYHQ9UIF7 546 aa14.52□□□□□ -0.09
RNF4-215ENST00000511843 KCNG1Q9UIX4 513 aa14.52□□□□□ -0.09
RNF4-215ENST00000511843 ANKRD63C9JTQ0 380 aa14.51□□□□□ -0.09
RNF4-215ENST00000511843 YEATS4O95619 227 aa14.51□□□□□ -0.09
RNF4-215ENST00000511843 IDEP14735 1019 aa14.51□□□□□ -0.09
RNF4-215ENST00000511843 KCNE1P15382 129 aa14.51□□□□□ -0.09
RNF4-215ENST00000511843 DNM1Q05193 864 aaKnown RBP14.51□□□□□ -0.09
RNF4-215ENST00000511843 UPP1Q16831 310 aa14.51□□□□□ -0.09
RNF4-215ENST00000511843 TTPALQ9BTX7 342 aa14.51□□□□□ -0.09
RNF4-215ENST00000511843 FGFBP2Q9BYJ0 223 aa14.51□□□□□ -0.09
RNF4-215ENST00000511843 TUBGCP4Q9UGJ1 667 aa14.51□□□□□ -0.09
RNF4-215ENST00000511843 SSX2IPQ9Y2D8 614 aa14.51□□□□□ -0.09
RNF4-215ENST00000511843 SCN1AP35498 2009 aa14.5□□□□□ -0.09
RNF4-215ENST00000511843 PODXLO00592 558 aa14.5□□□□□ -0.09
RNF4-215ENST00000511843 ADAM12O43184 909 aa14.5□□□□□ -0.09
RNF4-215ENST00000511843 TGM5O43548 720 aa14.5□□□□□ -0.09
RNF4-215ENST00000511843 FAM189A1O60320 539 aa14.5□□□□□ -0.09
RNF4-215ENST00000511843 CUTAO60888 179 aa14.5□□□□□ -0.09
RNF4-215ENST00000511843 PPP6R2O75170 966 aa14.5□□□□□ -0.09
RNF4-215ENST00000511843 RFPL2O75678 378 aa14.5□□□□□ -0.09
RNF4-215ENST00000511843 GLUD1P00367 558 aa14.5□□□□□ -0.09
RNF4-215ENST00000511843 PIGRP01833 764 aa14.5□□□□□ -0.09
RNF4-215ENST00000511843 TKTP29401 623 aaKnown RBP14.5□□□□□ -0.09
RNF4-215ENST00000511843 GUCY2FP51841 1108 aa14.5□□□□□ -0.09
RNF4-215ENST00000511843 CASP5P51878 434 aa14.5□□□□□ -0.09
RNF4-215ENST00000511843 GTF2BQ00403 316 aa14.5□□□□□ -0.09
RNF4-215ENST00000511843 ITIH3Q06033 890 aa14.5□□□□□ -0.09
RNF4-215ENST00000511843 KCNA1Q09470 495 aa14.5□□□□□ -0.09
RNF4-215ENST00000511843 PSMD5Q16401 504 aa14.5□□□□□ -0.09
RNF4-215ENST00000511843 AXDND1Q5T1B0 1012 aaPredicted RBP14.5□□□□□ -0.09
RNF4-215ENST00000511843 MAP4K3Q8IVH8 894 aa14.5□□□□□ -0.09
RNF4-215ENST00000511843 LNX1Q8TBB1 728 aaPredicted RBP14.5□□□□□ -0.09
RNF4-215ENST00000511843 DHX58Q96C10 678 aa14.5□□□□□ -0.09
RNF4-215ENST00000511843 FAM212AQ96EL1 285 aa14.5□□□□□ -0.09
RNF4-215ENST00000511843 CLSTN3Q9BQT9 956 aa14.5□□□□□ -0.09
RNF4-215ENST00000511843 MSTO1Q9BUK6 570 aa14.5□□□□□ -0.09
RNF4-215ENST00000511843 SFXN1Q9H9B4 322 aa14.5□□□□□ -0.09
RNF4-215ENST00000511843 MRPL44Q9H9J2 332 aaKnown RBP14.5□□□□□ -0.09
RNF4-215ENST00000511843 ZDHHC9Q9Y397 364 aa14.5□□□□□ -0.09
RNF4-215ENST00000511843 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.49□□□□□ -0.09
RNF4-215ENST00000511843 A0A0B4J269 797 aa14.49□□□□□ -0.09
RNF4-215ENST00000511843 TMEM189-UBE2V1I3L0A0 370 aa14.49□□□□□ -0.09
RNF4-215ENST00000511843 DCXO43602 365 aa14.49□□□□□ -0.09
RNF4-215ENST00000511843 CLTAP09496 248 aa14.49□□□□□ -0.09
RNF4-215ENST00000511843 ENOX2Q16206 610 aaKnown RBP14.49□□□□□ -0.09
RNF4-215ENST00000511843 E2F4Q16254 413 aa14.49□□□□□ -0.09
RNF4-215ENST00000511843 DCLRE1AQ6PJP8 1040 aa14.49□□□□□ -0.09
RNF4-215ENST00000511843 ZNF720Q7Z2F6 126 aa14.49□□□□□ -0.09
RNF4-215ENST00000511843 PIK3R5Q8WYR1 880 aa14.49□□□□□ -0.09
RNF4-215ENST00000511843 KCNN1Q92952 543 aa14.49□□□□□ -0.09
RNF4-215ENST00000511843 HPS3Q969F9 1004 aa14.49□□□□□ -0.09
RNF4-215ENST00000511843 KIF12Q96FN5 646 aa14.49□□□□□ -0.09
RNF4-215ENST00000511843 UROC1Q96N76 676 aa14.49□□□□□ -0.09
RNF4-215ENST00000511843 SLC38A7Q9NVC3 462 aa14.49□□□□□ -0.09
RNF4-215ENST00000511843 PANK4Q9NVE7 773 aa14.49□□□□□ -0.09
RNF4-215ENST00000511843 PCDHA7Q9UN72 937 aa14.49□□□□□ -0.09
RNF4-215ENST00000511843 TSC2P49815 1807 aa14.49□□□□□ -0.09
RNF4-215ENST00000511843 DOCK8Q8NF50 2099 aa14.49□□□□□ -0.09
RNF4-215ENST00000511843 CCDC195A0A1B0GUA6 201 aa14.48□□□□□ -0.09
RNF4-215ENST00000511843 TTC26A0AVF1 554 aa14.48□□□□□ -0.09
RNF4-215ENST00000511843 LACTBL1A8MY62 500 aa14.48□□□□□ -0.09
RNF4-215ENST00000511843 C2CD4DB7Z1M9 353 aa14.48□□□□□ -0.09
RNF4-215ENST00000511843 OGTO15294 1046 aa14.48□□□□□ -0.09
RNF4-215ENST00000511843 PPP1R37O75864 691 aa14.48□□□□□ -0.09
RNF4-215ENST00000511843 FGFR3P22607 806 aa14.48□□□□□ -0.09
RNF4-215ENST00000511843 CASP1P29466 404 aa14.48□□□□□ -0.09
RNF4-215ENST00000511843 MTHFRP42898 656 aa14.48□□□□□ -0.09
RNF4-215ENST00000511843 ME1P48163 572 aa14.48□□□□□ -0.09
RNF4-215ENST00000511843 ACOT2P49753 483 aa14.48□□□□□ -0.09
RNF4-215ENST00000511843 HERC4Q5GLZ8 1057 aaPredicted RBP14.48□□□□□ -0.09
RNF4-215ENST00000511843 LILRA6Q6PI73 481 aa14.48□□□□□ -0.09
RNF4-215ENST00000511843 RSPO2Q6UXX9 243 aaPredicted RBP14.48□□□□□ -0.09
RNF4-215ENST00000511843 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.48□□□□□ -0.09
RNF4-215ENST00000511843 GPR149Q86SP6 731 aa14.48□□□□□ -0.09
RNF4-215ENST00000511843 GLIS3Q8NEA6 775 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms