RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 HIST2H2ACQ16777 129 aaPredicted RBP6.09□□□□□ -1.43
USP38-203ENST00000511739 EPHA10Q5JZY3 1008 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 HIST2H2AA3Q6FI13 130 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 ALKBH5Q6P6C2 394 aaKnown RBP6.09□□□□□ -1.43
USP38-203ENST00000511739 ABTB1Q969K4 478 aaPredicted RBP6.09□□□□□ -1.43
USP38-203ENST00000511739 DYDC2Q96IM9 177 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 GPR63Q9BZJ6 419 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 ZMYND12Q9H0C1 365 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 YY1AP1Q9H869 796 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 ACTR5Q9H9F9 607 aaPredicted RBP6.09□□□□□ -1.43
USP38-203ENST00000511739 ZNF556Q9HAH1 456 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 PAPOLBQ9NRJ5 636 aaKnown RBP6.09□□□□□ -1.43
USP38-203ENST00000511739 EVA1BQ9NVM1 165 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 RNF14Q9UBS8 474 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 DPP7Q9UHL4 492 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 CCDC78A2IDD5 438 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 PJA2O43164 708 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 DIAPH2O60879 1101 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 H2AFYO75367 372 aaKnown RBP6.09□□□□□ -1.43
USP38-203ENST00000511739 SPAG7O75391 227 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 KITP10721 976 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 CETPP11597 493 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 ALOX15P16050 662 aaPredicted RBP6.09□□□□□ -1.43
USP38-203ENST00000511739 MZF1P28698 734 aaPredicted RBP6.09□□□□□ -1.43
USP38-203ENST00000511739 SOAT1P35610 550 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 KRT20P35900 424 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 EIF4A3P38919 411 aaKnown RBP6.09□□□□□ -1.43
USP38-203ENST00000511739 AP3M2P53677 418 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 MAP3K7CLP57077 242 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 ROR1Q01973 937 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 IFT88Q13099 833 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 LAMB3Q13751 1172 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 SLC39A14Q15043 492 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 KLHL38Q2WGJ6 581 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 TDRD7Q8NHU6 1098 aaKnown RBP6.09□□□□□ -1.43
USP38-203ENST00000511739 SH3RF3Q8TEJ3 882 aaPredicted RBP6.09□□□□□ -1.43
USP38-203ENST00000511739 RBAKQ9NYW8 714 aaPredicted RBP6.09□□□□□ -1.43
USP38-203ENST00000511739 SLC9A2Q9UBY0 812 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 C3orf70A6NLC5 250 aaPredicted RBP6.09□□□□□ -1.44
USP38-203ENST00000511739 PRPF3O43395 683 aaKnown RBP6.09□□□□□ -1.44
USP38-203ENST00000511739 ERN1O75460 977 aaKnown RBP6.09□□□□□ -1.44
USP38-203ENST00000511739 IFNAR1P17181 557 aa6.09□□□□□ -1.44
USP38-203ENST00000511739 SPARCL1Q14515 664 aa6.09□□□□□ -1.44
USP38-203ENST00000511739 SMAD1Q15797 465 aaKnown RBP6.09□□□□□ -1.44
USP38-203ENST00000511739 TRIM69Q86WT6 500 aa6.09□□□□□ -1.44
USP38-203ENST00000511739 SLC35F6Q8N357 371 aa6.09□□□□□ -1.44
USP38-203ENST00000511739 RNF25Q96BH1 459 aaPredicted RBP6.09□□□□□ -1.44
USP38-203ENST00000511739 FAM161BQ96MY7 647 aa6.09□□□□□ -1.44
USP38-203ENST00000511739 NFKBIZQ9BYH8 718 aa6.09□□□□□ -1.44
USP38-203ENST00000511739 COPS7BQ9H9Q2 264 aaPredicted RBP6.09□□□□□ -1.44
USP38-203ENST00000511739 IP6K2Q9UHH9 426 aa6.09□□□□□ -1.44
USP38-203ENST00000511739 RASSF10A6NK89 507 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 PIK3R2O00459 728 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 ADRA2BP18089 450 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 TYK2P29597 1187 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 RGS2P41220 211 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 CARSP49589 748 aaKnown RBP6.08□□□□□ -1.44
USP38-203ENST00000511739 ABCE1P61221 599 aaKnown RBP6.08□□□□□ -1.44
USP38-203ENST00000511739 FOXO4P98177 505 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 CDH18Q13634 790 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 FAM133BQ5BKY9 247 aaKnown RBP6.08□□□□□ -1.44
USP38-203ENST00000511739 DEPDC1Q5TB30 811 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 BBS7Q8IWZ6 715 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 C17orf53Q8N3J3 647 aaPredicted RBP6.08□□□□□ -1.44
USP38-203ENST00000511739 OSBP2Q969R2 916 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 ARL8AQ96BM9 186 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 COLEC11Q9BWP8 271 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 BRD8Q9H0E9 1235 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 SMYD3Q9H7B4 428 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 CNOT10Q9H9A5 744 aaKnown RBP6.08□□□□□ -1.44
USP38-203ENST00000511739 NR2E3Q9Y5X4 410 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 KIF1AQ12756 1690 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 PRKCBP05771 671 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 MLNP12872 115 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 PEX19P40855 299 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 COG2Q14746 738 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 TMEM132DQ14C87 1099 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 PLCL1Q15111 1095 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 C6orf10Q5SRN2 563 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 GAS2L3Q86XJ1 694 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 ATPAF2Q8N5M1 289 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 EXD1Q8NHP7 514 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 AP1M1Q9BXS5 423 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 KLHL11Q9NVR0 708 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 SPASTQ9UBP0 616 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 SLC39A10Q9ULF5 831 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 STK36Q9NRP7 1315 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 AP3B1O00203 1094 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 PSMD3O43242 534 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 MAP2K2P36507 400 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 RESTQ13127 1097 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 C6orf118Q5T5N4 469 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 CENPPQ6IPU0 288 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 PHACTR4Q8IZ21 702 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 CAMKK1Q8N5S9 505 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 ZNF614Q8N883 585 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 MRPS31Q92665 395 aaKnown RBP6.08□□□□□ -1.44
USP38-203ENST00000511739 FAM20AQ96MK3 541 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.08□□□□□ -1.44
USP38-203ENST00000511739 NDST4Q9H3R1 872 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms