RNA–Protein interactions for RNA: ENST00000508910.5

POLR2J3-214, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-214ENST00000508910 CRACR2AQ9BSW2 395 aa11.78□□□□□ -0.52
POLR2J3-214ENST00000508910 NUP58Q9BVL2 599 aa11.78□□□□□ -0.52
POLR2J3-214ENST00000508910 LSM14BQ9BX40 385 aaKnown RBP11.78□□□□□ -0.52
POLR2J3-214ENST00000508910 MTMR12Q9C0I1 747 aa11.78□□□□□ -0.52
POLR2J3-214ENST00000508910 INTS2Q9H0H0 1204 aaKnown RBP11.78□□□□□ -0.52
POLR2J3-214ENST00000508910 IMPACTQ9P2X3 320 aa11.78□□□□□ -0.52
POLR2J3-214ENST00000508910 PRKAG2Q9UGJ0 569 aa11.78□□□□□ -0.52
POLR2J3-214ENST00000508910 COQ4Q9Y3A0 265 aa11.78□□□□□ -0.52
POLR2J3-214ENST00000508910 C9IYK1 514 aa11.77□□□□□ -0.53
POLR2J3-214ENST00000508910 XPOTO43592 962 aaKnown RBP11.77□□□□□ -0.53
POLR2J3-214ENST00000508910 PFKMP08237 780 aa11.77□□□□□ -0.53
POLR2J3-214ENST00000508910 KCNE1P15382 129 aa11.77□□□□□ -0.53
POLR2J3-214ENST00000508910 ATF7P17544 494 aaPredicted RBP11.77□□□□□ -0.53
POLR2J3-214ENST00000508910 TRIM21P19474 475 aaKnown RBP11.77□□□□□ -0.53
POLR2J3-214ENST00000508910 PIK3CAP42336 1068 aa11.77□□□□□ -0.53
POLR2J3-214ENST00000508910 KCNMA1Q12791 1236 aa11.77□□□□□ -0.53
POLR2J3-214ENST00000508910 XKR4Q5GH76 650 aa11.77□□□□□ -0.53
POLR2J3-214ENST00000508910 FIGNQ5HY92 759 aa11.77□□□□□ -0.53
POLR2J3-214ENST00000508910 COL13A1Q5TAT6 717 aaPredicted RBP11.77□□□□□ -0.53
POLR2J3-214ENST00000508910 TDRD10Q5VZ19 366 aaKnown RBP11.77□□□□□ -0.53
POLR2J3-214ENST00000508910 MFSD5Q6N075 450 aa11.77□□□□□ -0.53
POLR2J3-214ENST00000508910 CNKSR3Q6P9H4 555 aa11.77□□□□□ -0.53
POLR2J3-214ENST00000508910 TRIM65Q6PJ69 517 aa11.77□□□□□ -0.53
POLR2J3-214ENST00000508910 ALKAL1Q6UXT8 129 aa11.77□□□□□ -0.53
POLR2J3-214ENST00000508910 DEFB128Q7Z7B8 93 aa11.77□□□□□ -0.53
POLR2J3-214ENST00000508910 ZNF598Q86UK7 904 aaKnown RBP11.77□□□□□ -0.53
POLR2J3-214ENST00000508910 PPFIBP1Q86W92 1011 aa11.77□□□□□ -0.53
POLR2J3-214ENST00000508910 ECHDC2Q86YB7 292 aa11.77□□□□□ -0.53
POLR2J3-214ENST00000508910 TMEM199Q8N511 208 aa11.77□□□□□ -0.53
POLR2J3-214ENST00000508910 NEK11Q8NG66 645 aa11.77□□□□□ -0.53
POLR2J3-214ENST00000508910 OR5B17Q8NGF7 314 aa11.77□□□□□ -0.53
POLR2J3-214ENST00000508910 ZNF516Q92618 1163 aa11.77□□□□□ -0.53
POLR2J3-214ENST00000508910 KIF12Q96FN5 646 aa11.77□□□□□ -0.53
POLR2J3-214ENST00000508910 HTATIP2Q9BUP3 242 aa11.77□□□□□ -0.53
POLR2J3-214ENST00000508910 UBN1Q9NPG3 1134 aa11.77□□□□□ -0.53
POLR2J3-214ENST00000508910 PLCB1Q9NQ66 1216 aa11.77□□□□□ -0.53
POLR2J3-214ENST00000508910 FAM207AQ9NSI2 230 aaPredicted RBP11.77□□□□□ -0.53
POLR2J3-214ENST00000508910 GIT1Q9Y2X7 761 aa11.77□□□□□ -0.53
POLR2J3-214ENST00000508910 DAAM1Q9Y4D1 1078 aa11.77□□□□□ -0.53
POLR2J3-214ENST00000508910 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.77□□□□□ -0.53
POLR2J3-214ENST00000508910 RBAK-RBAKDNI3L0D1 243 aa11.76□□□□□ -0.53
POLR2J3-214ENST00000508910 ZC3H11AO75152 810 aaKnown RBP eCLIP11.76□□□□□ -0.53
POLR2J3-214ENST00000508910 PHACTR2O75167 634 aa11.76□□□□□ -0.53
POLR2J3-214ENST00000508910 EOMESO95936 686 aa11.76□□□□□ -0.53
POLR2J3-214ENST00000508910 HLA-DRAP01903 254 aa11.76□□□□□ -0.53
POLR2J3-214ENST00000508910 C4BPAP04003 597 aaKnown RBP11.76□□□□□ -0.53
POLR2J3-214ENST00000508910 PTMAP06454 111 aaKnown RBP11.76□□□□□ -0.53
POLR2J3-214ENST00000508910 SLC9A1P19634 815 aa11.76□□□□□ -0.53
POLR2J3-214ENST00000508910 RFX1P22670 979 aa11.76□□□□□ -0.53
POLR2J3-214ENST00000508910 PON1P27169 355 aa11.76□□□□□ -0.53
POLR2J3-214ENST00000508910 MLH1P40692 756 aa11.76□□□□□ -0.53
POLR2J3-214ENST00000508910 KLK7P49862 253 aa11.76□□□□□ -0.53
POLR2J3-214ENST00000508910 GSDMDP57764 484 aa11.76□□□□□ -0.53
POLR2J3-214ENST00000508910 FAM189BP81408 668 aa11.76□□□□□ -0.53
POLR2J3-214ENST00000508910 TBX2Q13207 712 aaPredicted RBP11.76□□□□□ -0.53
POLR2J3-214ENST00000508910 AGMOQ6ZNB7 445 aa11.76□□□□□ -0.53
POLR2J3-214ENST00000508910 TRAPPC11Q7Z392 1133 aa11.76□□□□□ -0.53
POLR2J3-214ENST00000508910 RTN4RL1Q86UN2 441 aaPredicted RBP11.76□□□□□ -0.53
POLR2J3-214ENST00000508910 RNF169Q8NCN4 708 aa11.76□□□□□ -0.53
POLR2J3-214ENST00000508910 EHBP1Q8NDI1 1231 aa11.76□□□□□ -0.53
POLR2J3-214ENST00000508910 TAS1R2Q8TE23 839 aa11.76□□□□□ -0.53
POLR2J3-214ENST00000508910 LPPQ93052 612 aa11.76□□□□□ -0.53
POLR2J3-214ENST00000508910 FAM84AQ96KN4 292 aa11.76□□□□□ -0.53
POLR2J3-214ENST00000508910 RPS6KC1Q96S38 1066 aa11.76□□□□□ -0.53
POLR2J3-214ENST00000508910 IMPG2Q9BZV3 1241 aa11.76□□□□□ -0.53
POLR2J3-214ENST00000508910 ELAC1Q9H777 363 aaKnown RBP11.76□□□□□ -0.53
POLR2J3-214ENST00000508910 RSAD1Q9HA92 442 aa11.76□□□□□ -0.53
POLR2J3-214ENST00000508910 RAB20Q9NX57 234 aa11.76□□□□□ -0.53
POLR2J3-214ENST00000508910 TMEM161AQ9NX61 479 aa11.76□□□□□ -0.53
POLR2J3-214ENST00000508910 KLK14Q9P0G3 267 aa11.76□□□□□ -0.53
POLR2J3-214ENST00000508910 ITGA11Q9UKX5 1188 aa11.76□□□□□ -0.53
POLR2J3-214ENST00000508910 UBQLN1Q9UMX0 589 aaKnown RBP11.76□□□□□ -0.53
POLR2J3-214ENST00000508910 LTBP2Q14767 1821 aa11.76□□□□□ -0.53
POLR2J3-214ENST00000508910 MICAL3Q7RTP6 2002 aa11.76□□□□□ -0.53
POLR2J3-214ENST00000508910 TET1Q8NFU7 2136 aa11.75□□□□□ -0.53
POLR2J3-214ENST00000508910 SMIM28A0A1B0GU29 152 aa11.75□□□□□ -0.53
POLR2J3-214ENST00000508910 A0A1W2PQJ5 194 aa11.75□□□□□ -0.53
POLR2J3-214ENST00000508910 ARL5CA6NH57 179 aa11.75□□□□□ -0.53
POLR2J3-214ENST00000508910 MEIS3P2A8K0S8 358 aa11.75□□□□□ -0.53
POLR2J3-214ENST00000508910 INPPL1O15357 1258 aa11.75□□□□□ -0.53
POLR2J3-214ENST00000508910 VNN1O95497 513 aa11.75□□□□□ -0.53
POLR2J3-214ENST00000508910 GYPCP04921 128 aa11.75□□□□□ -0.53
POLR2J3-214ENST00000508910 IBSPP21815 317 aaPredicted RBP11.75□□□□□ -0.53
POLR2J3-214ENST00000508910 ITGB8P26012 769 aa11.75□□□□□ -0.53
POLR2J3-214ENST00000508910 TRPC3Q13507 836 aa11.75□□□□□ -0.53
POLR2J3-214ENST00000508910 NCOA4Q13772 614 aa11.75□□□□□ -0.53
POLR2J3-214ENST00000508910 IKBKEQ14164 716 aa11.75□□□□□ -0.53
POLR2J3-214ENST00000508910 TCTN1Q2MV58 587 aa11.75□□□□□ -0.53
POLR2J3-214ENST00000508910 GLRA4Q5JXX5 417 aa11.75□□□□□ -0.53
POLR2J3-214ENST00000508910 KLHDC7AQ5VTJ3 777 aa11.75□□□□□ -0.53
POLR2J3-214ENST00000508910 CNGA4Q8IV77 575 aa11.75□□□□□ -0.53
POLR2J3-214ENST00000508910 C7orf61Q8IZ16 206 aa11.75□□□□□ -0.53
POLR2J3-214ENST00000508910 RPUSD2Q8IZ73 545 aaKnown RBP11.75□□□□□ -0.53
POLR2J3-214ENST00000508910 C1orf127Q8N9H9 656 aa11.75□□□□□ -0.53
POLR2J3-214ENST00000508910 CCDC150Q8NCX0 1101 aa11.75□□□□□ -0.53
POLR2J3-214ENST00000508910 BEST2Q8NFU1 509 aa11.75□□□□□ -0.53
POLR2J3-214ENST00000508910 LMO3Q8TAP4 145 aa11.75□□□□□ -0.53
POLR2J3-214ENST00000508910 SEMA4DQ92854 862 aa11.75□□□□□ -0.53
POLR2J3-214ENST00000508910 ZFP42Q96MM3 310 aa11.75□□□□□ -0.53
POLR2J3-214ENST00000508910 ZMAT2Q96NC0 199 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms