RNA–Protein interactions for RNA: ENST00000508625.1

PDS5A-208, Transcript of PDS5 cohesin associated factor A, humanhuman

TSL 3

Gene PDS5A, Length 351 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5A-208ENST00000508625 PRAMEF4O60810 478 aa2.3□□□□□ -2.04
PDS5A-208ENST00000508625 GASTP01350 101 aa2.3□□□□□ -2.04
PDS5A-208ENST00000508625 SNRPA1P09661 255 aaKnown RBP2.3□□□□□ -2.04
PDS5A-208ENST00000508625 FGRP09769 529 aa2.3□□□□□ -2.04
PDS5A-208ENST00000508625 SLC9A1P19634 815 aa2.3□□□□□ -2.04
PDS5A-208ENST00000508625 GCSHP23434 173 aa2.3□□□□□ -2.04
PDS5A-208ENST00000508625 GPR15P49685 360 aa2.3□□□□□ -2.04
PDS5A-208ENST00000508625 SSRP1Q08945 709 aaKnown RBP2.3□□□□□ -2.04
PDS5A-208ENST00000508625 RABEP1Q15276 862 aa2.3□□□□□ -2.04
PDS5A-208ENST00000508625 CCDC178Q5BJE1 867 aa2.3□□□□□ -2.04
PDS5A-208ENST00000508625 C19orf54Q5BKX5 351 aa2.3□□□□□ -2.04
PDS5A-208ENST00000508625 FAM47AQ5JRC9 791 aa2.3□□□□□ -2.04
PDS5A-208ENST00000508625 ESRP1Q6NXG1 681 aaKnown RBP2.3□□□□□ -2.04
PDS5A-208ENST00000508625 VWA1Q6PCB0 445 aa2.3□□□□□ -2.04
PDS5A-208ENST00000508625 SLC2A7Q6PXP3 512 aa2.3□□□□□ -2.04
PDS5A-208ENST00000508625 ZNF66Q6ZN08 573 aa2.3□□□□□ -2.04
PDS5A-208ENST00000508625 KRTAP5-2Q701N4 177 aa2.3□□□□□ -2.04
PDS5A-208ENST00000508625 DDX53Q86TM3 631 aaKnown RBP2.3□□□□□ -2.04
PDS5A-208ENST00000508625 RASAL3Q86YV0 1011 aa2.3□□□□□ -2.04
PDS5A-208ENST00000508625 ZZZ3Q8IYH5 903 aa2.3□□□□□ -2.04
PDS5A-208ENST00000508625 RBMXL3Q8N7X1 1067 aaKnown RBP2.3□□□□□ -2.04
PDS5A-208ENST00000508625 CHST14Q8NCH0 376 aa2.3□□□□□ -2.04
PDS5A-208ENST00000508625 RTF1Q92541 710 aaKnown RBP2.3□□□□□ -2.04
PDS5A-208ENST00000508625 ELF4Q99607 663 aaPredicted RBP2.3□□□□□ -2.04
PDS5A-208ENST00000508625 SH2D3AQ9BRG2 576 aa2.3□□□□□ -2.04
PDS5A-208ENST00000508625 ANO3Q9BYT9 981 aa2.3□□□□□ -2.04
PDS5A-208ENST00000508625 TRIM55Q9BYV6 548 aa2.3□□□□□ -2.04
PDS5A-208ENST00000508625 TXLNGQ9NUQ3 528 aa2.3□□□□□ -2.04
PDS5A-208ENST00000508625 GPRC5DQ9NZD1 345 aa2.3□□□□□ -2.04
PDS5A-208ENST00000508625 PFDN2Q9UHV9 154 aa2.3□□□□□ -2.04
PDS5A-208ENST00000508625 PROCRQ9UNN8 238 aa2.3□□□□□ -2.04
PDS5A-208ENST00000508625 ST3GAL5Q9UNP4 418 aa2.3□□□□□ -2.04
PDS5A-208ENST00000508625 PNPLA7Q6ZV29 1317 aa2.29□□□□□ -2.04
PDS5A-208ENST00000508625 ST20-MTHFSA0A0A6YYL1 179 aa2.29□□□□□ -2.04
PDS5A-208ENST00000508625 CXorf49A8MYA2 514 aaPredicted RBP2.29□□□□□ -2.04
PDS5A-208ENST00000508625 ELL2O00472 640 aaPredicted RBP2.29□□□□□ -2.04
PDS5A-208ENST00000508625 FAM153BP0C7A2 387 aa2.29□□□□□ -2.04
PDS5A-208ENST00000508625 SRGNP10124 158 aa2.29□□□□□ -2.04
PDS5A-208ENST00000508625 CYP2D6P10635 497 aa2.29□□□□□ -2.04
PDS5A-208ENST00000508625 RANGAP1P46060 587 aaPredicted RBP2.29□□□□□ -2.04
PDS5A-208ENST00000508625 RAP2BP61225 183 aa2.29□□□□□ -2.04
PDS5A-208ENST00000508625 GNL2Q13823 731 aaKnown RBP2.29□□□□□ -2.04
PDS5A-208ENST00000508625 GEN1Q17RS7 908 aa2.29□□□□□ -2.04
PDS5A-208ENST00000508625 MTERF2Q49AM1 385 aa2.29□□□□□ -2.04
PDS5A-208ENST00000508625 TRIM61Q5EBN2 209 aa2.29□□□□□ -2.04
PDS5A-208ENST00000508625 CEP78Q5JTW2 689 aa2.29□□□□□ -2.04
PDS5A-208ENST00000508625 PRAMEF14Q5SWL7 426 aa2.29□□□□□ -2.04
PDS5A-208ENST00000508625 GLB1L2Q8IW92 636 aa2.29□□□□□ -2.04
PDS5A-208ENST00000508625 SNX33Q8WV41 574 aa2.29□□□□□ -2.04
PDS5A-208ENST00000508625 USP25Q9UHP3 1055 aa2.29□□□□□ -2.04
PDS5A-208ENST00000508625 LINC00473A8K010 186 aa2.28□□□□□ -2.04
PDS5A-208ENST00000508625 GCOM1H8Y6P7 765 aaPredicted RBP2.28□□□□□ -2.04
PDS5A-208ENST00000508625 PDPK1O15530 556 aa2.28□□□□□ -2.04
PDS5A-208ENST00000508625 GAS8-AS1O95177 125 aa2.28□□□□□ -2.04
PDS5A-208ENST00000508625 PFKMP08237 780 aa2.28□□□□□ -2.04
PDS5A-208ENST00000508625 SFPQP23246 707 aaKnown RBP eCLIP2.28□□□□□ -2.04
PDS5A-208ENST00000508625 PTPRRQ15256 657 aa2.28□□□□□ -2.04
PDS5A-208ENST00000508625 LONRF2Q1L5Z9 754 aa2.28□□□□□ -2.04
PDS5A-208ENST00000508625 RRP12Q5JTH9 1297 aaKnown RBP2.28□□□□□ -2.04
PDS5A-208ENST00000508625 DGKKQ5KSL6 1271 aa2.28□□□□□ -2.04
PDS5A-208ENST00000508625 ABHD15Q6UXT9 468 aa2.28□□□□□ -2.04
PDS5A-208ENST00000508625 FGD2Q7Z6J4 655 aa2.28□□□□□ -2.04
PDS5A-208ENST00000508625 DRC7Q8IY82 874 aa2.28□□□□□ -2.04
PDS5A-208ENST00000508625 CABP5Q9NP86 173 aa2.28□□□□□ -2.04
PDS5A-208ENST00000508625 TOMM22Q9NS69 142 aa2.28□□□□□ -2.04
PDS5A-208ENST00000508625 TMEM260Q9NX78 707 aa2.28□□□□□ -2.04
PDS5A-208ENST00000508625 PCDHB1Q9Y5F3 818 aa2.28□□□□□ -2.04
PDS5A-208ENST00000508625 KCNU1A8MYU2 1149 aa2.27□□□□□ -2.05
PDS5A-208ENST00000508625 ADM5C9JUS6 153 aa2.27□□□□□ -2.05
PDS5A-208ENST00000508625 SOCS2O14508 198 aa2.27□□□□□ -2.05
PDS5A-208ENST00000508625 PROM1O43490 865 aa2.27□□□□□ -2.05
PDS5A-208ENST00000508625 GLRX3O76003 335 aaKnown RBP2.27□□□□□ -2.05
PDS5A-208ENST00000508625 TUBB4AP04350 444 aa2.27□□□□□ -2.05
PDS5A-208ENST00000508625 SCP2P22307 547 aa2.27□□□□□ -2.05
PDS5A-208ENST00000508625 CRHR1P34998 444 aa2.27□□□□□ -2.05
PDS5A-208ENST00000508625 PTPN7P35236 360 aa2.27□□□□□ -2.05
PDS5A-208ENST00000508625 THBS3P49746 956 aa2.27□□□□□ -2.05
PDS5A-208ENST00000508625 MEF2AQ02078 507 aaPredicted RBP2.27□□□□□ -2.05
PDS5A-208ENST00000508625 ARID5AQ03989 594 aa2.27□□□□□ -2.05
PDS5A-208ENST00000508625 RAB33AQ14088 237 aa2.27□□□□□ -2.05
PDS5A-208ENST00000508625 ERV3-1Q14264 604 aa2.27□□□□□ -2.05
PDS5A-208ENST00000508625 RASA3Q14644 834 aa2.27□□□□□ -2.05
PDS5A-208ENST00000508625 LRRC41Q15345 812 aa2.27□□□□□ -2.05
PDS5A-208ENST00000508625 TRIP6Q15654 476 aaKnown RBP2.27□□□□□ -2.05
PDS5A-208ENST00000508625 ZC3H12BQ5HYM0 836 aaKnown RBP2.27□□□□□ -2.05
PDS5A-208ENST00000508625 ESPNLQ6ZVH7 1005 aa2.27□□□□□ -2.05
PDS5A-208ENST00000508625 IRF2BP2Q7Z5L9 587 aa2.27□□□□□ -2.05
PDS5A-208ENST00000508625 LYZL4Q96KX0 146 aa2.27□□□□□ -2.05
PDS5A-208ENST00000508625 CTAGE1Q96RT6 745 aa2.27□□□□□ -2.05
PDS5A-208ENST00000508625 SAMD15Q9P1V8 674 aa2.27□□□□□ -2.05
PDS5A-208ENST00000508625 CCDC9Q9Y3X0 531 aaKnown RBP2.27□□□□□ -2.05
PDS5A-208ENST00000508625 AFG3L2Q9Y4W6 797 aa2.27□□□□□ -2.05
PDS5A-208ENST00000508625 SPO11Q9Y5K1 396 aa2.27□□□□□ -2.05
PDS5A-208ENST00000508625 FAM90A10PA6NDY2 464 aa2.26□□□□□ -2.05
PDS5A-208ENST00000508625 TARM1B6A8C7 271 aa2.26□□□□□ -2.05
PDS5A-208ENST00000508625 KCNQ2O43526 872 aa2.26□□□□□ -2.05
PDS5A-208ENST00000508625 PRSS23O95084 383 aa2.26□□□□□ -2.05
PDS5A-208ENST00000508625 POMCP01189 267 aa2.26□□□□□ -2.05
PDS5A-208ENST00000508625 ALPLP05186 524 aa2.26□□□□□ -2.05
PDS5A-208ENST00000508625 RASGRF1Q13972 1273 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms