RNA–Protein interactions for RNA: ENST00000508625.1

PDS5A-208, Transcript of PDS5 cohesin associated factor A, humanhuman

TSL 3

Gene PDS5A, Length 351 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5A-208ENST00000508625 AEBP2Q6ZN18 517 aaPredicted RBP16.52■□□□□ 0.24
PDS5A-208ENST00000508625 CHIC1Q5VXU3 224 aa15.47■□□□□ 0.07
PDS5A-208ENST00000508625 SENP3Q9H4L4 574 aaPredicted RBP14.19□□□□□ -0.14
PDS5A-208ENST00000508625 PHF23Q9BUL5 403 aaPredicted RBP13.95□□□□□ -0.18
PDS5A-208ENST00000508625 FOXD1Q16676 465 aa13.24□□□□□ -0.29
PDS5A-208ENST00000508625 POTEDQ86YR6 584 aa13.19□□□□□ -0.3
PDS5A-208ENST00000508625 MSH5O43196 834 aa12.66□□□□□ -0.38
PDS5A-208ENST00000508625 PIAS4Q8N2W9 510 aaPredicted RBP12.3□□□□□ -0.44
PDS5A-208ENST00000508625 PLPPR3Q6T4P5 718 aa12.11□□□□□ -0.47
PDS5A-208ENST00000508625 PPP6R1Q9UPN7 881 aa12.1□□□□□ -0.47
PDS5A-208ENST00000508625 ADRA2BP18089 450 aa12.04□□□□□ -0.48
PDS5A-208ENST00000508625 MAPK8IP2Q13387 824 aaPredicted RBP11.18□□□□□ -0.62
PDS5A-208ENST00000508625 DMRT2Q9Y5R5 561 aa11.18□□□□□ -0.62
PDS5A-208ENST00000508625 CACNB1Q02641 598 aaPredicted RBP11.14□□□□□ -0.63
PDS5A-208ENST00000508625 SCAF1Q9H7N4 1312 aaKnown RBP11.06□□□□□ -0.64
PDS5A-208ENST00000508625 DCAF8L1A6NGE4 600 aa10.77□□□□□ -0.69
PDS5A-208ENST00000508625 RNF39Q9H2S5 420 aa10.71□□□□□ -0.69
PDS5A-208ENST00000508625 HOXD11P31277 338 aaPredicted RBP10.62□□□□□ -0.71
PDS5A-208ENST00000508625 PPP4R3CPQ6ZMV5 832 aa10.57□□□□□ -0.72
PDS5A-208ENST00000508625 C1QBPQ07021 282 aaKnown RBP10.55□□□□□ -0.72
PDS5A-208ENST00000508625 CNKSR2Q8WXI2 1034 aa10.46□□□□□ -0.73
PDS5A-208ENST00000508625 RNF216Q9NWF9 866 aaPredicted RBP10.45□□□□□ -0.74
PDS5A-208ENST00000508625 DNAJC5BQ9UF47 199 aa10.33□□□□□ -0.76
PDS5A-208ENST00000508625 POTEHQ6S545 545 aa10.25□□□□□ -0.77
PDS5A-208ENST00000508625 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.15□□□□□ -0.78
PDS5A-208ENST00000508625 NCBP3Q53F19 620 aaKnown RBP10.07□□□□□ -0.8
PDS5A-208ENST00000508625 NPM3O75607 178 aaKnown RBP9.89□□□□□ -0.83
PDS5A-208ENST00000508625 DSG3P32926 999 aa9.87□□□□□ -0.83
PDS5A-208ENST00000508625 CAPN15O75808 1086 aa9.86□□□□□ -0.83
PDS5A-208ENST00000508625 U3KPZ7 1027 aaPredicted RBP9.86□□□□□ -0.83
PDS5A-208ENST00000508625 SPINK5Q9NQ38 1064 aaPredicted RBP9.83□□□□□ -0.84
PDS5A-208ENST00000508625 TRHP20396 242 aaPredicted RBP9.62□□□□□ -0.87
PDS5A-208ENST00000508625 APLP2Q06481 763 aa9.59□□□□□ -0.87
PDS5A-208ENST00000508625 ABCB7O75027 752 aa9.58□□□□□ -0.88
PDS5A-208ENST00000508625 ZNF219Q9P2Y4 722 aaPredicted RBP9.58□□□□□ -0.88
PDS5A-208ENST00000508625 SLC4A2P04920 1241 aa9.53□□□□□ -0.88
PDS5A-208ENST00000508625 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.49□□□□□ -0.89
PDS5A-208ENST00000508625 HNRNPUL2Q1KMD3 747 aaKnown RBP9.49□□□□□ -0.89
PDS5A-208ENST00000508625 RBM42Q9BTD8 480 aaKnown RBP9.48□□□□□ -0.89
PDS5A-208ENST00000508625 CHRDL2Q6WN34 429 aa9.43□□□□□ -0.9
PDS5A-208ENST00000508625 SAMD1Q6SPF0 538 aaPredicted RBP9.41□□□□□ -0.9
PDS5A-208ENST00000508625 KCNA4P22459 653 aa9.37□□□□□ -0.91
PDS5A-208ENST00000508625 SP7Q8TDD2 431 aaPredicted RBP9.37□□□□□ -0.91
PDS5A-208ENST00000508625 POLA2Q14181 598 aa9.27□□□□□ -0.93
PDS5A-208ENST00000508625 MYCNP04198 464 aaPredicted RBP9.17□□□□□ -0.94
PDS5A-208ENST00000508625 AKT1S1Q96B36 256 aa9.15□□□□□ -0.94
PDS5A-208ENST00000508625 PIP4P2Q8N4L2 257 aa9.07□□□□□ -0.96
PDS5A-208ENST00000508625 HAX1O00165 279 aa9.05□□□□□ -0.96
PDS5A-208ENST00000508625 REM2Q8IYK8 340 aaPredicted RBP9.05□□□□□ -0.96
PDS5A-208ENST00000508625 ZBTB12Q9Y330 459 aaPredicted RBP9.05□□□□□ -0.96
PDS5A-208ENST00000508625 OSCARQ8IYS5 282 aa8.96□□□□□ -0.98
PDS5A-208ENST00000508625 ATF5Q9Y2D1 282 aaPredicted RBP8.96□□□□□ -0.98
PDS5A-208ENST00000508625 FXR2P51116 673 aaKnown RBP eCLIP8.95□□□□□ -0.98
PDS5A-208ENST00000508625 PITPNM1O00562 1244 aa8.94□□□□□ -0.98
PDS5A-208ENST00000508625 FOXD4L1Q9NU39 408 aa8.87□□□□□ -0.99
PDS5A-208ENST00000508625 EVX2Q03828 476 aa8.85□□□□□ -0.99
PDS5A-208ENST00000508625 SLC4A1APQ9BWU0 796 aaKnown RBP8.79□□□□□ -1
PDS5A-208ENST00000508625 LHX8Q68G74 356 aa8.76□□□□□ -1.01
PDS5A-208ENST00000508625 SPDYE2BA6NHP3 402 aa8.74□□□□□ -1.01
PDS5A-208ENST00000508625 SPDYE6P0CI01 402 aa8.74□□□□□ -1.01
PDS5A-208ENST00000508625 SPDYE2Q495Y8 402 aa8.74□□□□□ -1.01
PDS5A-208ENST00000508625 PRKAR2AP13861 404 aaKnown RBP8.73□□□□□ -1.01
PDS5A-208ENST00000508625 CLEC11AQ9Y240 323 aa8.7□□□□□ -1.02
PDS5A-208ENST00000508625 SPDYE1Q8NFV5 336 aaPredicted RBP8.69□□□□□ -1.02
PDS5A-208ENST00000508625 C19orf67A6NJJ6 358 aa8.68□□□□□ -1.02
PDS5A-208ENST00000508625 FBLN2P98095 1184 aa8.68□□□□□ -1.02
PDS5A-208ENST00000508625 GABBR2O75899 941 aa8.65□□□□□ -1.02
PDS5A-208ENST00000508625 ATXN8OSP0DMR3 200 aa8.64□□□□□ -1.03
PDS5A-208ENST00000508625 PLSCR2Q9NRY7 297 aa8.64□□□□□ -1.03
PDS5A-208ENST00000508625 ZNF692Q9BU19 519 aaPredicted RBP8.59□□□□□ -1.03
PDS5A-208ENST00000508625 ZBTB22O15209 634 aa8.58□□□□□ -1.04
PDS5A-208ENST00000508625 SSUH2Q9Y2M2 353 aa8.56□□□□□ -1.04
PDS5A-208ENST00000508625 CHADLQ6NUI6 762 aa8.55□□□□□ -1.04
PDS5A-208ENST00000508625 MKRN4PQ13434 485 aaPredicted RBP8.52□□□□□ -1.05
PDS5A-208ENST00000508625 PRR29P0C7W0 189 aa8.51□□□□□ -1.05
PDS5A-208ENST00000508625 POTEIP0CG38 1075 aa8.44□□□□□ -1.06
PDS5A-208ENST00000508625 CLCN6P51797 869 aa8.44□□□□□ -1.06
PDS5A-208ENST00000508625 PABPN1Q86U42 306 aaKnown RBP eCLIP8.44□□□□□ -1.06
PDS5A-208ENST00000508625 CD44P16070 742 aaKnown RBP8.43□□□□□ -1.06
PDS5A-208ENST00000508625 FARP1Q9Y4F1 1045 aaPredicted RBP8.39□□□□□ -1.07
PDS5A-208ENST00000508625 DCBLD2Q96PD2 775 aa8.37□□□□□ -1.07
PDS5A-208ENST00000508625 POTEMA6NI47 508 aa8.29□□□□□ -1.08
PDS5A-208ENST00000508625 ZNF579Q8NAF0 562 aaKnown RBP8.27□□□□□ -1.09
PDS5A-208ENST00000508625 ZRANB1Q9UGI0 708 aa8.27□□□□□ -1.09
PDS5A-208ENST00000508625 OTUD5Q96G74 571 aa8.25□□□□□ -1.09
PDS5A-208ENST00000508625 POTEGQ6S5H5 508 aa8.24□□□□□ -1.09
PDS5A-208ENST00000508625 PCDH10Q9P2E7 1040 aa8.23□□□□□ -1.09
PDS5A-208ENST00000508625 GALR2O43603 387 aaPredicted RBP8.2□□□□□ -1.1
PDS5A-208ENST00000508625 CREBZFQ9NS37 354 aa8.17□□□□□ -1.1
PDS5A-208ENST00000508625 POTEB2H3BUK9 544 aa8.16□□□□□ -1.1
PDS5A-208ENST00000508625 STAG3Q9UJ98 1225 aa8.15□□□□□ -1.1
PDS5A-208ENST00000508625 PAK3O75914 559 aaPredicted RBP8.14□□□□□ -1.11
PDS5A-208ENST00000508625 PHF12Q96QT6 1004 aa8.09□□□□□ -1.11
PDS5A-208ENST00000508625 PELP1Q8IZL8 1130 aaKnown RBP8.07□□□□□ -1.12
PDS5A-208ENST00000508625 NPM1P06748 294 aaKnown RBP eCLIP8.05□□□□□ -1.12
PDS5A-208ENST00000508625 MAMSTRQ6ZN01 415 aa8.03□□□□□ -1.12
PDS5A-208ENST00000508625 METRNQ9UJH8 293 aa8.02□□□□□ -1.13
PDS5A-208ENST00000508625 C7P10643 843 aa8.01□□□□□ -1.13
PDS5A-208ENST00000508625 SLC39A7Q92504 469 aa8.01□□□□□ -1.13
PDS5A-208ENST00000508625 ASTLQ6HA08 431 aaPredicted RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms