RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 PDZD7Q9H5P4 517 aa18.19■□□□□ 0.5
SNF8-205ENST00000507302 TRPV5Q9NQA5 729 aa18.19■□□□□ 0.5
SNF8-205ENST00000507302 CDV3Q9UKY7 258 aaKnown RBP18.19■□□□□ 0.5
SNF8-205ENST00000507302 RECQL4O94761 1208 aa18.18■□□□□ 0.5
SNF8-205ENST00000507302 MICAL2O94851 1124 aa18.18■□□□□ 0.5
SNF8-205ENST00000507302 BAG4O95429 457 aaKnown RBP18.18■□□□□ 0.5
SNF8-205ENST00000507302 IGFBP6P24592 240 aaPredicted RBP18.18■□□□□ 0.5
SNF8-205ENST00000507302 PRSS36Q5K4E3 855 aa18.18■□□□□ 0.5
SNF8-205ENST00000507302 TANGO2Q6ICL3 276 aa18.18■□□□□ 0.5
SNF8-205ENST00000507302 CPLX2Q6PUV4 134 aaKnown RBP18.18■□□□□ 0.5
SNF8-205ENST00000507302 TSSK4Q6SA08 328 aa18.18■□□□□ 0.5
SNF8-205ENST00000507302 CCDC113Q9H0I3 377 aa18.18■□□□□ 0.5
SNF8-205ENST00000507302 HEBP1Q9NRV9 189 aa18.18■□□□□ 0.5
SNF8-205ENST00000507302 SNTG2Q9NY99 539 aa18.18■□□□□ 0.5
SNF8-205ENST00000507302 POLIQ9UNA4 740 aa18.18■□□□□ 0.5
SNF8-205ENST00000507302 MRPS17Q9Y2R5 130 aaKnown RBP18.18■□□□□ 0.5
SNF8-205ENST00000507302 N4BP3O15049 544 aa18.17■□□□□ 0.5
SNF8-205ENST00000507302 LRP3O75074 770 aa18.17■□□□□ 0.5
SNF8-205ENST00000507302 ABLIM3O94929 683 aa18.17■□□□□ 0.5
SNF8-205ENST00000507302 RHOP08100 348 aa18.17■□□□□ 0.5
SNF8-205ENST00000507302 CENPQQ7L2Z9 268 aaPredicted RBP18.17■□□□□ 0.5
SNF8-205ENST00000507302 PPP1R10Q96QC0 940 aaKnown RBP18.17■□□□□ 0.5
SNF8-205ENST00000507302 GJB4Q9NTQ9 266 aa18.17■□□□□ 0.5
SNF8-205ENST00000507302 PCDHA12Q9UN75 941 aa18.17■□□□□ 0.5
SNF8-205ENST00000507302 MRPS23Q9Y3D9 190 aaKnown RBP18.17■□□□□ 0.5
SNF8-205ENST00000507302 TICRRQ7Z2Z1 1910 aa18.17■□□□□ 0.5
SNF8-205ENST00000507302 FAM205CA6NFA0 338 aa18.16■□□□□ 0.5
SNF8-205ENST00000507302 EDN1P05305 212 aa18.16■□□□□ 0.5
SNF8-205ENST00000507302 NRLP54845 237 aa18.16■□□□□ 0.5
SNF8-205ENST00000507302 LAIR1Q6GTX8 287 aa18.16■□□□□ 0.5
SNF8-205ENST00000507302 SLC8B1Q6J4K2 584 aa18.16■□□□□ 0.5
SNF8-205ENST00000507302 MAP4K3Q8IVH8 894 aa18.16■□□□□ 0.5
SNF8-205ENST00000507302 CELF5Q8N6W0 485 aaKnown RBP18.16■□□□□ 0.5
SNF8-205ENST00000507302 ING5Q8WYH8 240 aa18.16■□□□□ 0.5
SNF8-205ENST00000507302 DDX27Q96GQ7 796 aaKnown RBP18.16■□□□□ 0.5
SNF8-205ENST00000507302 GPRC5CQ9NQ84 441 aa18.16■□□□□ 0.5
SNF8-205ENST00000507302 CYP46A1Q9Y6A2 500 aa18.16■□□□□ 0.5
SNF8-205ENST00000507302 CDY1Q9Y6F8 540 aa18.16■□□□□ 0.5
SNF8-205ENST00000507302 DCDC2BA2VCK2 349 aa18.15■□□□□ 0.5
SNF8-205ENST00000507302 ACKR2O00590 384 aa18.15■□□□□ 0.5
SNF8-205ENST00000507302 MAN2B1O00754 1011 aa18.15■□□□□ 0.5
SNF8-205ENST00000507302 REC8O95072 547 aa18.15■□□□□ 0.5
SNF8-205ENST00000507302 SPATA31C1P0DKV0 1188 aa18.15■□□□□ 0.5
SNF8-205ENST00000507302 CEBPBP17676 345 aa18.15■□□□□ 0.5
SNF8-205ENST00000507302 PTPN2P17706 415 aa18.15■□□□□ 0.5
SNF8-205ENST00000507302 MLLT6P55198 1093 aaPredicted RBP18.15■□□□□ 0.5
SNF8-205ENST00000507302 SCRN1Q12765 414 aa18.15■□□□□ 0.5
SNF8-205ENST00000507302 UPP1Q16831 310 aa18.15■□□□□ 0.5
SNF8-205ENST00000507302 ANKS3Q6ZW76 656 aa18.15■□□□□ 0.5
SNF8-205ENST00000507302 MCPH1Q8NEM0 835 aa18.15■□□□□ 0.5
SNF8-205ENST00000507302 ZNF461Q8TAF7 563 aa18.15■□□□□ 0.5
SNF8-205ENST00000507302 PIGOQ8TEQ8 1089 aa18.15■□□□□ 0.5
SNF8-205ENST00000507302 MCRS1Q96EZ8 462 aa18.15■□□□□ 0.5
SNF8-205ENST00000507302 MTMR9Q96QG7 549 aa18.15■□□□□ 0.5
SNF8-205ENST00000507302 TTC12Q9H892 705 aaPredicted RBP18.15■□□□□ 0.5
SNF8-205ENST00000507302 LRRIQ4A6NIV6 560 aa18.14■□□□□ 0.49
SNF8-205ENST00000507302 NRG2O14511 850 aaPredicted RBP18.14■□□□□ 0.49
SNF8-205ENST00000507302 SLC30A4O14863 429 aa18.14■□□□□ 0.49
SNF8-205ENST00000507302 MARCH6O60337 910 aa18.14■□□□□ 0.49
SNF8-205ENST00000507302 CDKL5O76039 1030 aa18.14■□□□□ 0.49
SNF8-205ENST00000507302 XBP1P17861 261 aa18.14■□□□□ 0.49
SNF8-205ENST00000507302 XKR4Q5GH76 650 aa18.14■□□□□ 0.49
SNF8-205ENST00000507302 TCEAL8Q8IYN2 117 aa18.14■□□□□ 0.49
SNF8-205ENST00000507302 C3orf58Q8NDZ4 430 aa18.14■□□□□ 0.49
SNF8-205ENST00000507302 NETO1Q8TDF5 533 aa18.14■□□□□ 0.49
SNF8-205ENST00000507302 BSNDQ8WZ55 320 aa18.14■□□□□ 0.49
SNF8-205ENST00000507302 UROC1Q96N76 676 aa18.14■□□□□ 0.49
SNF8-205ENST00000507302 LARP6Q9BRS8 491 aaKnown RBP18.14■□□□□ 0.49
SNF8-205ENST00000507302 C2orf40Q9H1Z8 148 aa18.14■□□□□ 0.49
SNF8-205ENST00000507302 GMEB2Q9UKD1 530 aa18.14■□□□□ 0.49
SNF8-205ENST00000507302 PDCD11Q14690 1871 aaKnown RBP18.14■□□□□ 0.49
SNF8-205ENST00000507302 USO1O60763 962 aaKnown RBP18.13■□□□□ 0.49
SNF8-205ENST00000507302 RETP07949 1114 aa18.13■□□□□ 0.49
SNF8-205ENST00000507302 TKTP29401 623 aaKnown RBP18.13■□□□□ 0.49
SNF8-205ENST00000507302 CLCNKBP51801 687 aa18.13■□□□□ 0.49
SNF8-205ENST00000507302 ROR1Q01973 937 aa18.13■□□□□ 0.49
SNF8-205ENST00000507302 STK3Q13188 491 aa18.13■□□□□ 0.49
SNF8-205ENST00000507302 NR5A1Q13285 461 aa18.13■□□□□ 0.49
SNF8-205ENST00000507302 PRPF4BQ13523 1007 aaKnown RBP18.13■□□□□ 0.49
SNF8-205ENST00000507302 FAM78AQ5JUQ0 283 aa18.13■□□□□ 0.49
SNF8-205ENST00000507302 EEF1DP3Q658K8 133 aa18.13■□□□□ 0.49
SNF8-205ENST00000507302 NOSTRINQ8IVI9 506 aa18.13■□□□□ 0.49
SNF8-205ENST00000507302 ZBTB8OSQ8IWT0 167 aa18.13■□□□□ 0.49
SNF8-205ENST00000507302 ASB16Q96NS5 453 aa18.13■□□□□ 0.49
SNF8-205ENST00000507302 TRPV4Q9HBA0 871 aa18.13■□□□□ 0.49
SNF8-205ENST00000507302 ZNF334Q9HCZ1 680 aaPredicted RBP18.13■□□□□ 0.49
SNF8-205ENST00000507302 USP18Q9UMW8 372 aa18.13■□□□□ 0.49
SNF8-205ENST00000507302 RALGAPA1Q6GYQ0 2036 aa18.12■□□□□ 0.49
SNF8-205ENST00000507302 WDR27A2RRH5 827 aa18.12■□□□□ 0.49
SNF8-205ENST00000507302 ARNTLO00327 626 aa18.12■□□□□ 0.49
SNF8-205ENST00000507302 WNT7AO00755 349 aa18.12■□□□□ 0.49
SNF8-205ENST00000507302 B3GAT3O94766 335 aa18.12■□□□□ 0.49
SNF8-205ENST00000507302 PAPSS2O95340 614 aaPredicted RBP18.12■□□□□ 0.49
SNF8-205ENST00000507302 CTDNEP1O95476 244 aa18.12■□□□□ 0.49
SNF8-205ENST00000507302 ATF2P15336 505 aa18.12■□□□□ 0.49
SNF8-205ENST00000507302 CCR2P41597 374 aa18.12■□□□□ 0.49
SNF8-205ENST00000507302 MRPL58Q14197 206 aaKnown RBP18.12■□□□□ 0.49
SNF8-205ENST00000507302 CALCRLQ16602 461 aa18.12■□□□□ 0.49
SNF8-205ENST00000507302 MAPK6Q16659 721 aa18.12■□□□□ 0.49
SNF8-205ENST00000507302 DCAF4L1Q3SXM0 396 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms