RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 GLYCTKQ8IVS8 523 aa11.41□□□□□ -0.58
NR1I3-222ENST00000506018 DAW1Q8N136 415 aa11.41□□□□□ -0.58
NR1I3-222ENST00000506018 B3GALT6Q96L58 329 aa11.41□□□□□ -0.58
NR1I3-222ENST00000506018 PNMA5Q96PV4 448 aa11.41□□□□□ -0.58
NR1I3-222ENST00000506018 PPP1R10Q96QC0 940 aaKnown RBP11.41□□□□□ -0.58
NR1I3-222ENST00000506018 PAAF1Q9BRP4 392 aa11.41□□□□□ -0.58
NR1I3-222ENST00000506018 TARS2Q9BW92 718 aaKnown RBP11.41□□□□□ -0.58
NR1I3-222ENST00000506018 CDT1Q9H211 546 aa11.41□□□□□ -0.58
NR1I3-222ENST00000506018 LIMD1Q9UGP4 676 aa11.41□□□□□ -0.58
NR1I3-222ENST00000506018 CLUHO75153 1309 aa11.4□□□□□ -0.58
NR1I3-222ENST00000506018 SMIM28A0A1B0GU29 152 aa11.4□□□□□ -0.59
NR1I3-222ENST00000506018 CLDN3O15551 220 aa11.4□□□□□ -0.59
NR1I3-222ENST00000506018 FAM13AO94988 1023 aa11.4□□□□□ -0.59
NR1I3-222ENST00000506018 BRD1O95696 1058 aa11.4□□□□□ -0.59
NR1I3-222ENST00000506018 HARSP12081 509 aaKnown RBP11.4□□□□□ -0.59
NR1I3-222ENST00000506018 GBP2P32456 591 aaPredicted RBP11.4□□□□□ -0.59
NR1I3-222ENST00000506018 OSTNP61366 133 aa11.4□□□□□ -0.59
NR1I3-222ENST00000506018 MAPK7Q13164 816 aa11.4□□□□□ -0.59
NR1I3-222ENST00000506018 CUL4AQ13619 759 aa11.4□□□□□ -0.59
NR1I3-222ENST00000506018 NOLC1Q14978 699 aaKnown RBP eCLIP11.4□□□□□ -0.59
NR1I3-222ENST00000506018 SF3A1Q15459 793 aaKnown RBP11.4□□□□□ -0.59
NR1I3-222ENST00000506018 NAB2Q15742 525 aa11.4□□□□□ -0.59
NR1I3-222ENST00000506018 RTP2Q5QGT7 225 aa11.4□□□□□ -0.59
NR1I3-222ENST00000506018 PRSS55Q6UWB4 352 aaPredicted RBP11.4□□□□□ -0.59
NR1I3-222ENST00000506018 ANKS3Q6ZW76 656 aa11.4□□□□□ -0.59
NR1I3-222ENST00000506018 GPBP1Q86WP2 473 aa11.4□□□□□ -0.59
NR1I3-222ENST00000506018 IRF2BPLQ9H1B7 796 aa11.4□□□□□ -0.59
NR1I3-222ENST00000506018 PTPRHQ9HD43 1115 aa11.4□□□□□ -0.59
NR1I3-222ENST00000506018 WDR6Q9NNW5 1121 aaKnown RBP11.4□□□□□ -0.59
NR1I3-222ENST00000506018 IGSF9Q9P2J2 1179 aa11.4□□□□□ -0.59
NR1I3-222ENST00000506018 ANKFY1Q9P2R3 1169 aa11.4□□□□□ -0.59
NR1I3-222ENST00000506018 CCDC39Q9UFE4 941 aa11.4□□□□□ -0.59
NR1I3-222ENST00000506018 NUB1Q9Y5A7 615 aa11.4□□□□□ -0.59
NR1I3-222ENST00000506018 TRIOO75962 3097 aa11.39□□□□□ -0.59
NR1I3-222ENST00000506018 DOCK8Q8NF50 2099 aa11.39□□□□□ -0.59
NR1I3-222ENST00000506018 ZDBF2Q9HCK1 2354 aa11.39□□□□□ -0.59
NR1I3-222ENST00000506018 KMT2EQ8IZD2 1858 aa11.39□□□□□ -0.59
NR1I3-222ENST00000506018 XPOTO43592 962 aaKnown RBP11.39□□□□□ -0.59
NR1I3-222ENST00000506018 XYLBO75191 536 aa11.39□□□□□ -0.59
NR1I3-222ENST00000506018 TBCAO75347 108 aaKnown RBP11.39□□□□□ -0.59
NR1I3-222ENST00000506018 ZMYND10O75800 440 aa11.39□□□□□ -0.59
NR1I3-222ENST00000506018 HNRNPA1P09651 372 aaKnown RBP eCLIP11.39□□□□□ -0.59
NR1I3-222ENST00000506018 SPATA31D3P0C874 917 aa11.39□□□□□ -0.59
NR1I3-222ENST00000506018 MAPTP10636 758 aaKnown RBP11.39□□□□□ -0.59
NR1I3-222ENST00000506018 RPL17P18621 184 aaKnown RBP11.39□□□□□ -0.59
NR1I3-222ENST00000506018 PROZP22891 400 aa11.39□□□□□ -0.59
NR1I3-222ENST00000506018 RPL9P32969 192 aaKnown RBP11.39□□□□□ -0.59
NR1I3-222ENST00000506018 LIG4P49917 911 aa11.39□□□□□ -0.59
NR1I3-222ENST00000506018 CLCNKBP51801 687 aa11.39□□□□□ -0.59
NR1I3-222ENST00000506018 DHX8Q14562 1220 aaKnown RBP11.39□□□□□ -0.59
NR1I3-222ENST00000506018 UPP1Q16831 310 aa11.39□□□□□ -0.59
NR1I3-222ENST00000506018 PPM1LQ5SGD2 360 aa11.39□□□□□ -0.59
NR1I3-222ENST00000506018 SPATA31D4Q6ZUB0 917 aa11.39□□□□□ -0.59
NR1I3-222ENST00000506018 RTL10Q7L3V2 364 aa11.39□□□□□ -0.59
NR1I3-222ENST00000506018 MYCT1Q8N699 235 aa11.39□□□□□ -0.59
NR1I3-222ENST00000506018 TMEM161BQ8NDZ6 487 aa11.39□□□□□ -0.59
NR1I3-222ENST00000506018 LNX1Q8TBB1 728 aaPredicted RBP11.39□□□□□ -0.59
NR1I3-222ENST00000506018 LARP4BQ92615 738 aaKnown RBP11.39□□□□□ -0.59
NR1I3-222ENST00000506018 NXPE3Q969Y0 559 aa11.39□□□□□ -0.59
NR1I3-222ENST00000506018 SNX27Q96L92 541 aa11.39□□□□□ -0.59
NR1I3-222ENST00000506018 PRKD2Q9BZL6 878 aa11.39□□□□□ -0.59
NR1I3-222ENST00000506018 MFSD1Q9H3U5 465 aa11.39□□□□□ -0.59
NR1I3-222ENST00000506018 PARVGQ9HBI0 331 aa11.39□□□□□ -0.59
NR1I3-222ENST00000506018 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.39□□□□□ -0.59
NR1I3-222ENST00000506018 CACNG4Q9UBN1 327 aa11.39□□□□□ -0.59
NR1I3-222ENST00000506018 PCDHB8Q9UN66 801 aa11.39□□□□□ -0.59
NR1I3-222ENST00000506018 H7C4K7 107 aa11.38□□□□□ -0.59
NR1I3-222ENST00000506018 K7ENM7 598 aa11.38□□□□□ -0.59
NR1I3-222ENST00000506018 PODXLO00592 558 aa11.38□□□□□ -0.59
NR1I3-222ENST00000506018 HNRNPDLO14979 420 aaKnown RBP11.38□□□□□ -0.59
NR1I3-222ENST00000506018 RFPL2O75678 378 aa11.38□□□□□ -0.59
NR1I3-222ENST00000506018 ASGR2P07307 311 aa11.38□□□□□ -0.59
NR1I3-222ENST00000506018 MYBP10242 640 aa11.38□□□□□ -0.59
NR1I3-222ENST00000506018 KCNE1P15382 129 aa11.38□□□□□ -0.59
NR1I3-222ENST00000506018 PLCG1P19174 1290 aa11.38□□□□□ -0.59
NR1I3-222ENST00000506018 FGFR3P22607 806 aa11.38□□□□□ -0.59
NR1I3-222ENST00000506018 HOXA9P31269 272 aa11.38□□□□□ -0.59
NR1I3-222ENST00000506018 PTPN5P54829 565 aa11.38□□□□□ -0.59
NR1I3-222ENST00000506018 NCKAP1LP55160 1127 aa11.38□□□□□ -0.59
NR1I3-222ENST00000506018 TDGQ13569 410 aa11.38□□□□□ -0.59
NR1I3-222ENST00000506018 UVSSAQ2YD98 709 aa11.38□□□□□ -0.59
NR1I3-222ENST00000506018 XKR4Q5GH76 650 aa11.38□□□□□ -0.59
NR1I3-222ENST00000506018 LILRA6Q6PI73 481 aa11.38□□□□□ -0.59
NR1I3-222ENST00000506018 ALKAL1Q6UXT8 129 aa11.38□□□□□ -0.59
NR1I3-222ENST00000506018 TAS1R3Q7RTX0 852 aa11.38□□□□□ -0.59
NR1I3-222ENST00000506018 HAUS6Q7Z4H7 955 aa11.38□□□□□ -0.59
NR1I3-222ENST00000506018 CEP120Q8N960 986 aa11.38□□□□□ -0.59
NR1I3-222ENST00000506018 KRI1Q8N9T8 703 aaKnown RBP11.38□□□□□ -0.59
NR1I3-222ENST00000506018 RAD54LQ92698 747 aa11.38□□□□□ -0.59
NR1I3-222ENST00000506018 ASIC4Q96FT7 647 aa11.38□□□□□ -0.59
NR1I3-222ENST00000506018 REEP2Q9BRK0 252 aa11.38□□□□□ -0.59
NR1I3-222ENST00000506018 ZHX3Q9H4I2 956 aa11.38□□□□□ -0.59
NR1I3-222ENST00000506018 PLEKHA5Q9HAU0 1116 aa11.38□□□□□ -0.59
NR1I3-222ENST00000506018 CNTN3Q9P232 1028 aa11.38□□□□□ -0.59
NR1I3-222ENST00000506018 FBXW11Q9UKB1 542 aa11.38□□□□□ -0.59
NR1I3-222ENST00000506018 ZFP37Q9Y6Q3 630 aaPredicted RBP11.38□□□□□ -0.59
NR1I3-222ENST00000506018 SYN3O14994 580 aa11.37□□□□□ -0.59
NR1I3-222ENST00000506018 TRAK2O60296 914 aa11.37□□□□□ -0.59
NR1I3-222ENST00000506018 GABBR2O75899 941 aa11.37□□□□□ -0.59
NR1I3-222ENST00000506018 PAPLNO95428 1278 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms