RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 IL18RAPO95256 599 aa18.53■□□□□ 0.56
TRAPPC11-204ENST00000505676 CLTAP09496 248 aa18.53■□□□□ 0.56
TRAPPC11-204ENST00000505676 MAPK4P31152 587 aa18.53■□□□□ 0.56
TRAPPC11-204ENST00000505676 PHKA2P46019 1235 aa18.53■□□□□ 0.56
TRAPPC11-204ENST00000505676 PTENP60484 403 aa18.53■□□□□ 0.56
TRAPPC11-204ENST00000505676 MKRN4PQ13434 485 aaPredicted RBP18.53■□□□□ 0.56
TRAPPC11-204ENST00000505676 TAPT1Q6NXT6 567 aa18.53■□□□□ 0.56
TRAPPC11-204ENST00000505676 MAATS1Q7Z4T9 603 aa18.53■□□□□ 0.56
TRAPPC11-204ENST00000505676 C2orf69Q8N8R5 385 aa18.53■□□□□ 0.56
TRAPPC11-204ENST00000505676 FAM71BQ8TC56 605 aa18.53■□□□□ 0.56
TRAPPC11-204ENST00000505676 VCPIP1Q96JH7 1222 aa18.53■□□□□ 0.56
TRAPPC11-204ENST00000505676 TCHPQ9BT92 498 aa18.53■□□□□ 0.56
TRAPPC11-204ENST00000505676 PLVAPQ9BX97 442 aa18.53■□□□□ 0.56
TRAPPC11-204ENST00000505676 ZNFX1Q9P2E3 1918 aaKnown RBP18.53■□□□□ 0.56
TRAPPC11-204ENST00000505676 FAM189A1O60320 539 aa18.52■□□□□ 0.56
TRAPPC11-204ENST00000505676 VNN1O95497 513 aa18.52■□□□□ 0.56
TRAPPC11-204ENST00000505676 TMOD1P28289 359 aa18.52■□□□□ 0.56
TRAPPC11-204ENST00000505676 TNNT3P45378 269 aaPredicted RBP18.52■□□□□ 0.56
TRAPPC11-204ENST00000505676 YWHAEP62258 255 aaKnown RBP18.52■□□□□ 0.56
TRAPPC11-204ENST00000505676 TNFAIP2Q03169 654 aa18.52■□□□□ 0.56
TRAPPC11-204ENST00000505676 CUL1Q13616 776 aa18.52■□□□□ 0.56
TRAPPC11-204ENST00000505676 DUOXA2Q1HG44 320 aa18.52■□□□□ 0.56
TRAPPC11-204ENST00000505676 FAM110CQ1W6H9 321 aa18.52■□□□□ 0.56
TRAPPC11-204ENST00000505676 ZBTB45Q96K62 511 aaPredicted RBP18.52■□□□□ 0.56
TRAPPC11-204ENST00000505676 R3HDMLQ9H3Y0 253 aa18.52■□□□□ 0.56
TRAPPC11-204ENST00000505676 DMGDHQ9UI17 866 aaKnown RBP18.52■□□□□ 0.56
TRAPPC11-204ENST00000505676 CPSF3Q9UKF6 684 aaKnown RBP18.52■□□□□ 0.56
TRAPPC11-204ENST00000505676 TNFSF13BQ9Y275 285 aa18.52■□□□□ 0.56
TRAPPC11-204ENST00000505676 ALG6Q9Y672 507 aa18.52■□□□□ 0.56
TRAPPC11-204ENST00000505676 PLXNB2O15031 1838 aa18.52■□□□□ 0.55
TRAPPC11-204ENST00000505676 CCDC66A2RUB6 948 aa18.51■□□□□ 0.55
TRAPPC11-204ENST00000505676 PPFIA4O75335 1185 aa18.51■□□□□ 0.55
TRAPPC11-204ENST00000505676 OAS2P29728 719 aaKnown RBP18.51■□□□□ 0.55
TRAPPC11-204ENST00000505676 NOP14P78316 857 aaKnown RBP18.51■□□□□ 0.55
TRAPPC11-204ENST00000505676 NCOA4Q13772 614 aa18.51■□□□□ 0.55
TRAPPC11-204ENST00000505676 TAF3Q5VWG9 929 aa18.51■□□□□ 0.55
TRAPPC11-204ENST00000505676 EFCAB12Q6NXP0 572 aa18.51■□□□□ 0.55
TRAPPC11-204ENST00000505676 WHAMMQ8TF30 809 aa18.51■□□□□ 0.55
TRAPPC11-204ENST00000505676 ZNF653Q96CK0 615 aa18.51■□□□□ 0.55
TRAPPC11-204ENST00000505676 KRT12Q99456 494 aa18.51■□□□□ 0.55
TRAPPC11-204ENST00000505676 EHD2Q9NZN4 543 aa18.51■□□□□ 0.55
TRAPPC11-204ENST00000505676 ZNF236Q9UL36 1845 aa18.51■□□□□ 0.55
TRAPPC11-204ENST00000505676 KRIT1O00522 736 aa18.51■□□□□ 0.55
TRAPPC11-204ENST00000505676 HEXIM1O94992 359 aaKnown RBP18.51■□□□□ 0.55
TRAPPC11-204ENST00000505676 C22orf31O95567 290 aa18.51■□□□□ 0.55
TRAPPC11-204ENST00000505676 LGALS2P05162 132 aa18.51■□□□□ 0.55
TRAPPC11-204ENST00000505676 SRGAP2CP0DJJ0 459 aa18.51■□□□□ 0.55
TRAPPC11-204ENST00000505676 CTNNA2P26232 953 aa18.51■□□□□ 0.55
TRAPPC11-204ENST00000505676 DNA2P51530 1060 aa18.51■□□□□ 0.55
TRAPPC11-204ENST00000505676 DRP2Q13474 957 aa18.51■□□□□ 0.55
TRAPPC11-204ENST00000505676 GRB14Q14449 540 aa18.51■□□□□ 0.55
TRAPPC11-204ENST00000505676 ATF7IP2Q5U623 682 aa18.51■□□□□ 0.55
TRAPPC11-204ENST00000505676 TRIM50Q86XT4 487 aa18.51■□□□□ 0.55
TRAPPC11-204ENST00000505676 RHPN2Q8IUC4 686 aa18.51■□□□□ 0.55
TRAPPC11-204ENST00000505676 ZNF564Q8TBZ8 553 aaPredicted RBP18.51■□□□□ 0.55
TRAPPC11-204ENST00000505676 RUNDC3BQ96NL0 473 aa18.51■□□□□ 0.55
TRAPPC11-204ENST00000505676 PTPRHQ9HD43 1115 aa18.51■□□□□ 0.55
TRAPPC11-204ENST00000505676 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.51■□□□□ 0.55
TRAPPC11-204ENST00000505676 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.51■□□□□ 0.55
TRAPPC11-204ENST00000505676 SMARCAL1Q9NZC9 954 aa18.51■□□□□ 0.55
TRAPPC11-204ENST00000505676 COG5Q9UP83 839 aa18.51■□□□□ 0.55
TRAPPC11-204ENST00000505676 ABLIM1O14639 778 aa18.5■□□□□ 0.55
TRAPPC11-204ENST00000505676 B4GALT4O60513 344 aa18.5■□□□□ 0.55
TRAPPC11-204ENST00000505676 UNGP13051 313 aaPredicted RBP18.5■□□□□ 0.55
TRAPPC11-204ENST00000505676 SGSM1Q2NKQ1 1148 aa18.5■□□□□ 0.55
TRAPPC11-204ENST00000505676 GOLGA6L1Q8N7Z2 621 aa18.5■□□□□ 0.55
TRAPPC11-204ENST00000505676 BRI3BPQ8WY22 251 aa18.5■□□□□ 0.55
TRAPPC11-204ENST00000505676 ZCCHC17Q9NP64 241 aaKnown RBP18.5■□□□□ 0.55
TRAPPC11-204ENST00000505676 ASS1P00966 412 aaKnown RBP18.5■□□□□ 0.55
TRAPPC11-204ENST00000505676 CYP1A1P04798 512 aaPredicted RBP18.5■□□□□ 0.55
TRAPPC11-204ENST00000505676 HOXD8P13378 290 aaPredicted RBP18.5■□□□□ 0.55
TRAPPC11-204ENST00000505676 ACO1P21399 889 aaKnown RBP18.5■□□□□ 0.55
TRAPPC11-204ENST00000505676 SLC1A1P43005 524 aa18.5■□□□□ 0.55
TRAPPC11-204ENST00000505676 CENPCQ03188 943 aa18.5■□□□□ 0.55
TRAPPC11-204ENST00000505676 LIN9Q5TKA1 542 aa18.5■□□□□ 0.55
TRAPPC11-204ENST00000505676 DNAAF5Q86Y56 855 aa18.5■□□□□ 0.55
TRAPPC11-204ENST00000505676 ZSWIM1Q9BR11 485 aa18.5■□□□□ 0.55
TRAPPC11-204ENST00000505676 PI4K2AQ9BTU6 479 aa18.5■□□□□ 0.55
TRAPPC11-204ENST00000505676 NUP85Q9BW27 656 aa18.5■□□□□ 0.55
TRAPPC11-204ENST00000505676 HPCAL4Q9UM19 191 aa18.5■□□□□ 0.55
TRAPPC11-204ENST00000505676 PLXNA1Q9UIW2 1896 aa18.5■□□□□ 0.55
TRAPPC11-204ENST00000505676 CDC42EP1Q00587 391 aa18.49■□□□□ 0.55
TRAPPC11-204ENST00000505676 SPRYD7Q5W111 196 aa18.49■□□□□ 0.55
TRAPPC11-204ENST00000505676 ALS2CLQ60I27 953 aa18.49■□□□□ 0.55
TRAPPC11-204ENST00000505676 LRRC71Q8N4P6 559 aa18.49■□□□□ 0.55
TRAPPC11-204ENST00000505676 LINC01465Q8N7H1 131 aa18.49■□□□□ 0.55
TRAPPC11-204ENST00000505676 COPS5Q92905 334 aa18.49■□□□□ 0.55
TRAPPC11-204ENST00000505676 RNPC3Q96LT9 517 aaKnown RBP18.49■□□□□ 0.55
TRAPPC11-204ENST00000505676 ABHD16BQ9H3Z7 469 aa18.49■□□□□ 0.55
TRAPPC11-204ENST00000505676 GOLPH3Q9H4A6 298 aa18.49■□□□□ 0.55
TRAPPC11-204ENST00000505676 FAM124BQ9H5Z6 455 aaPredicted RBP18.49■□□□□ 0.55
TRAPPC11-204ENST00000505676 ZNF408Q9H9D4 720 aa18.49■□□□□ 0.55
TRAPPC11-204ENST00000505676 PDGFCQ9NRA1 345 aa18.49■□□□□ 0.55
TRAPPC11-204ENST00000505676 SLC15A5A6NIM6 579 aa18.49■□□□□ 0.55
TRAPPC11-204ENST00000505676 TNNC2P02585 160 aa18.49■□□□□ 0.55
TRAPPC11-204ENST00000505676 EDN1P05305 212 aa18.49■□□□□ 0.55
TRAPPC11-204ENST00000505676 HOXC6P09630 235 aa18.49■□□□□ 0.55
TRAPPC11-204ENST00000505676 MCF2P10911 925 aa18.49■□□□□ 0.55
TRAPPC11-204ENST00000505676 NSFP46459 744 aaKnown RBP18.49■□□□□ 0.55
TRAPPC11-204ENST00000505676 MBTD1Q05BQ5 628 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms