RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 DDX39AO00148 427 aaKnown RBP6.71□□□□□ -1.34
GYPB-204ENST00000504951 SLC27A2O14975 620 aa6.71□□□□□ -1.34
GYPB-204ENST00000504951 POMCP01189 267 aa6.71□□□□□ -1.34
GYPB-204ENST00000504951 CAPNS1P04632 268 aa6.71□□□□□ -1.34
GYPB-204ENST00000504951 C8AP07357 584 aa6.71□□□□□ -1.34
GYPB-204ENST00000504951 C1QTNF9P0C862 333 aa6.71□□□□□ -1.34
GYPB-204ENST00000504951 SPATA31D3P0C874 917 aa6.71□□□□□ -1.34
GYPB-204ENST00000504951 ITGA4P13612 1032 aa6.71□□□□□ -1.34
GYPB-204ENST00000504951 CEACAM1P13688 526 aa6.71□□□□□ -1.34
GYPB-204ENST00000504951 CSRP1P21291 193 aaKnown RBP6.71□□□□□ -1.34
GYPB-204ENST00000504951 OR1G1P47890 313 aa6.71□□□□□ -1.34
GYPB-204ENST00000504951 NAPAP54920 295 aa6.71□□□□□ -1.34
GYPB-204ENST00000504951 GAS6Q14393 721 aa6.71□□□□□ -1.34
GYPB-204ENST00000504951 PABPC1LQ4VXU2 614 aaKnown RBP6.71□□□□□ -1.34
GYPB-204ENST00000504951 SPATA31D4Q6ZUB0 917 aa6.71□□□□□ -1.34
GYPB-204ENST00000504951 CACNA2D4Q7Z3S7 1137 aa6.71□□□□□ -1.34
GYPB-204ENST00000504951 METTL3Q86U44 580 aaKnown RBP6.71□□□□□ -1.34
GYPB-204ENST00000504951 RHPN2Q8IUC4 686 aa6.71□□□□□ -1.34
GYPB-204ENST00000504951 RDH13Q8NBN7 331 aa6.71□□□□□ -1.34
GYPB-204ENST00000504951 DEPDC1BQ8WUY9 529 aa6.71□□□□□ -1.34
GYPB-204ENST00000504951 FAM3CQ92520 227 aa6.71□□□□□ -1.34
GYPB-204ENST00000504951 SLC5A5Q92911 643 aa6.71□□□□□ -1.34
GYPB-204ENST00000504951 TCEANC2Q96MN5 208 aa6.71□□□□□ -1.34
GYPB-204ENST00000504951 TTPALQ9BTX7 342 aa6.71□□□□□ -1.34
GYPB-204ENST00000504951 TRMT61BQ9BVS5 477 aaKnown RBP6.71□□□□□ -1.34
GYPB-204ENST00000504951 NFKBIZQ9BYH8 718 aa6.71□□□□□ -1.34
GYPB-204ENST00000504951 PLA2G2FQ9BZM2 168 aa6.71□□□□□ -1.34
GYPB-204ENST00000504951 DHX33Q9H6R0 707 aaKnown RBP6.71□□□□□ -1.34
GYPB-204ENST00000504951 C8orf33Q9H7E9 229 aaPredicted RBP6.71□□□□□ -1.34
GYPB-204ENST00000504951 ZFP14Q9HCL3 533 aa6.71□□□□□ -1.34
GYPB-204ENST00000504951 ZNF334Q9HCZ1 680 aaPredicted RBP6.71□□□□□ -1.34
GYPB-204ENST00000504951 MIOSQ9NXC5 875 aa6.71□□□□□ -1.34
GYPB-204ENST00000504951 TOR4AQ9NXH8 423 aa6.71□□□□□ -1.34
GYPB-204ENST00000504951 MAFFQ9ULX9 164 aa6.71□□□□□ -1.34
GYPB-204ENST00000504951 PRG3Q9Y2Y8 225 aaPredicted RBP6.71□□□□□ -1.34
GYPB-204ENST00000504951 FCF1Q9Y324 198 aaKnown RBP6.71□□□□□ -1.34
GYPB-204ENST00000504951 IPPQ9Y573 584 aa6.71□□□□□ -1.34
GYPB-204ENST00000504951 BACE2Q9Y5Z0 518 aa6.71□□□□□ -1.34
GYPB-204ENST00000504951 SLC12A7Q9Y666 1083 aa6.71□□□□□ -1.34
GYPB-204ENST00000504951 SMG1Q96Q15 3661 aaKnown RBP6.71□□□□□ -1.34
GYPB-204ENST00000504951 SF3B1O75533 1304 aaKnown RBP eCLIP6.71□□□□□ -1.342e-6■■■■■ 43.1
GYPB-204ENST00000504951 FLNBO75369 2602 aaKnown RBP6.7□□□□□ -1.34
GYPB-204ENST00000504951 CYP3A7-CYP3A51PA0A087WV96 503 aa6.7□□□□□ -1.34
GYPB-204ENST00000504951 TMEM189-UBE2V1I3L0A0 370 aa6.7□□□□□ -1.34
GYPB-204ENST00000504951 ARNTLO00327 626 aa6.7□□□□□ -1.34
GYPB-204ENST00000504951 ZNF197O14709 1029 aa6.7□□□□□ -1.34
GYPB-204ENST00000504951 ZBTB24O43167 697 aaPredicted RBP6.7□□□□□ -1.34
GYPB-204ENST00000504951 EDIL3O43854 480 aa6.7□□□□□ -1.34
GYPB-204ENST00000504951 DKC1O60832 514 aaKnown RBP eCLIP6.7□□□□□ -1.34
GYPB-204ENST00000504951 PSMD10O75832 226 aa6.7□□□□□ -1.34
GYPB-204ENST00000504951 PTPN2P17706 415 aa6.7□□□□□ -1.34
GYPB-204ENST00000504951 PSMC3P17980 439 aa6.7□□□□□ -1.34
GYPB-204ENST00000504951 FCARP24071 287 aa6.7□□□□□ -1.34
GYPB-204ENST00000504951 CYP3A7P24462 503 aa6.7□□□□□ -1.34
GYPB-204ENST00000504951 GNA11P29992 359 aa6.7□□□□□ -1.34
GYPB-204ENST00000504951 SMCPP49901 116 aaPredicted RBP6.7□□□□□ -1.34
GYPB-204ENST00000504951 NTHL1P78549 312 aa6.7□□□□□ -1.34
GYPB-204ENST00000504951 SATB1Q01826 763 aa6.7□□□□□ -1.34
GYPB-204ENST00000504951 NCBP1Q09161 790 aaKnown RBP6.7□□□□□ -1.34
GYPB-204ENST00000504951 GRIK3Q13003 919 aa6.7□□□□□ -1.34
GYPB-204ENST00000504951 LRRC32Q14392 662 aa6.7□□□□□ -1.34
GYPB-204ENST00000504951 NECTIN1Q15223 517 aa6.7□□□□□ -1.34
GYPB-204ENST00000504951 AASDHQ4L235 1098 aaPredicted RBP6.7□□□□□ -1.34
GYPB-204ENST00000504951 PRSS36Q5K4E3 855 aa6.7□□□□□ -1.34
GYPB-204ENST00000504951 LCE2AQ5TA79 106 aaPredicted RBP6.7□□□□□ -1.34
GYPB-204ENST00000504951 CREB3L3Q68CJ9 461 aa6.7□□□□□ -1.34
GYPB-204ENST00000504951 TANGO2Q6ICL3 276 aa6.7□□□□□ -1.34
GYPB-204ENST00000504951 NOTUMQ6P988 496 aa6.7□□□□□ -1.34
GYPB-204ENST00000504951 NFXL1Q6ZNB6 911 aa6.7□□□□□ -1.34
GYPB-204ENST00000504951 PRR23BQ6ZRT6 265 aa6.7□□□□□ -1.34
GYPB-204ENST00000504951 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.7□□□□□ -1.34
GYPB-204ENST00000504951 MICU3Q86XE3 530 aa6.7□□□□□ -1.34
GYPB-204ENST00000504951 MFSD6LQ8IWD5 586 aa6.7□□□□□ -1.34
GYPB-204ENST00000504951 HACE1Q8IYU2 909 aa6.7□□□□□ -1.34
GYPB-204ENST00000504951 C12orf50Q8NA57 414 aaPredicted RBP6.7□□□□□ -1.34
GYPB-204ENST00000504951 LEMD2Q8NC56 503 aa6.7□□□□□ -1.34
GYPB-204ENST00000504951 GAB3Q8WWW8 586 aa6.7□□□□□ -1.34
GYPB-204ENST00000504951 GAD1Q99259 594 aa6.7□□□□□ -1.34
GYPB-204ENST00000504951 KXD1Q9BQD3 176 aa6.7□□□□□ -1.34
GYPB-204ENST00000504951 GPR88Q9GZN0 384 aa6.7□□□□□ -1.34
GYPB-204ENST00000504951 CSRNP2Q9H175 543 aa6.7□□□□□ -1.34
GYPB-204ENST00000504951 VPS45Q9NRW7 570 aa6.7□□□□□ -1.34
GYPB-204ENST00000504951 BRPF3Q9ULD4 1205 aa6.7□□□□□ -1.34
GYPB-204ENST00000504951 MRPS23Q9Y3D9 190 aaKnown RBP6.7□□□□□ -1.34
GYPB-204ENST00000504951 NEUROG3Q9Y4Z2 214 aa6.7□□□□□ -1.34
GYPB-204ENST00000504951 SAMM50Q9Y512 469 aa6.7□□□□□ -1.34
GYPB-204ENST00000504951 COL4A3BPQ9Y5P4 624 aa6.7□□□□□ -1.34
GYPB-204ENST00000504951 CNTNAP5Q8WYK1 1306 aa6.7□□□□□ -1.34
GYPB-204ENST00000504951 LAMA5O15230 3695 aa6.69□□□□□ -1.34
GYPB-204ENST00000504951 IGF2RP11717 2491 aa6.69□□□□□ -1.34
GYPB-204ENST00000504951 CHURC1-FNTBB4DL54 471 aa6.69□□□□□ -1.34
GYPB-204ENST00000504951 CHADO15335 359 aa6.69□□□□□ -1.34
GYPB-204ENST00000504951 MSH4O15457 936 aa6.69□□□□□ -1.34
GYPB-204ENST00000504951 TADA2AO75478 443 aa6.69□□□□□ -1.34
GYPB-204ENST00000504951 WFS1O76024 890 aa6.69□□□□□ -1.34
GYPB-204ENST00000504951 ABLIM3O94929 683 aa6.69□□□□□ -1.34
GYPB-204ENST00000504951 RHOP08100 348 aa6.69□□□□□ -1.34
GYPB-204ENST00000504951 WEE1P30291 646 aa6.69□□□□□ -1.34
GYPB-204ENST00000504951 FNTBP49356 437 aa6.69□□□□□ -1.34
GYPB-204ENST00000504951 RBM25P49756 843 aaKnown RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms