RNA–Protein interactions for RNA: ENST00000504782.5

RNF4-206, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-206ENST00000504782 TCHPQ9BT92 498 aa14.02□□□□□ -0.17
RNF4-206ENST00000504782 RHOBTB2Q9BYZ6 727 aa14.02□□□□□ -0.17
RNF4-206ENST00000504782 ZDHHC7Q9NXF8 308 aa14.02□□□□□ -0.17
RNF4-206ENST00000504782 MYH15Q9Y2K3 1946 aa14.02□□□□□ -0.17
RNF4-206ENST00000504782 TMEM189-UBE2V1I3L0A0 370 aa14.01□□□□□ -0.17
RNF4-206ENST00000504782 CCL16O15467 120 aa14.01□□□□□ -0.17
RNF4-206ENST00000504782 PI15O43692 258 aa14.01□□□□□ -0.17
RNF4-206ENST00000504782 C1RP00736 705 aa14.01□□□□□ -0.17
RNF4-206ENST00000504782 MCF2P10911 925 aa14.01□□□□□ -0.17
RNF4-206ENST00000504782 SPAG1Q07617 926 aa14.01□□□□□ -0.17
RNF4-206ENST00000504782 SLC10A6Q3KNW5 377 aa14.01□□□□□ -0.17
RNF4-206ENST00000504782 ARL6IP4Q66PJ3 421 aaKnown RBP14.01□□□□□ -0.17
RNF4-206ENST00000504782 CWF19L1Q69YN2 538 aaKnown RBP14.01□□□□□ -0.17
RNF4-206ENST00000504782 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.01□□□□□ -0.17
RNF4-206ENST00000504782 GET4Q7L5D6 327 aaPredicted RBP14.01□□□□□ -0.17
RNF4-206ENST00000504782 GRASPQ7Z6J2 395 aaPredicted RBP14.01□□□□□ -0.17
RNF4-206ENST00000504782 SPIRE2Q8WWL2 714 aa14.01□□□□□ -0.17
RNF4-206ENST00000504782 DDX27Q96GQ7 796 aaKnown RBP14.01□□□□□ -0.17
RNF4-206ENST00000504782 ACAP3Q96P50 834 aa14.01□□□□□ -0.17
RNF4-206ENST00000504782 RPP25Q9BUL9 199 aaKnown RBP14.01□□□□□ -0.17
RNF4-206ENST00000504782 CCDC94Q9BW85 323 aaPredicted RBP14.01□□□□□ -0.17
RNF4-206ENST00000504782 UPF2Q9HAU5 1272 aaKnown RBP14.01□□□□□ -0.17
RNF4-206ENST00000504782 BLOC1S4Q9NUP1 217 aa14.01□□□□□ -0.17
RNF4-206ENST00000504782 HCFC1R1Q9NWW0 138 aa14.01□□□□□ -0.17
RNF4-206ENST00000504782 ANKFY1Q9P2R3 1169 aa14.01□□□□□ -0.17
RNF4-206ENST00000504782 EPS15L1Q9UBC2 864 aa14.01□□□□□ -0.17
RNF4-206ENST00000504782 MTRRQ9UBK8 725 aa14.01□□□□□ -0.17
RNF4-206ENST00000504782 DPP7Q9UHL4 492 aa14.01□□□□□ -0.17
RNF4-206ENST00000504782 DUSP12Q9UNI6 340 aa14.01□□□□□ -0.17
RNF4-206ENST00000504782 RBM19Q9Y4C8 960 aaKnown RBP14.01□□□□□ -0.17
RNF4-206ENST00000504782 ANK1P16157 1881 aa14.01□□□□□ -0.17
RNF4-206ENST00000504782 H0Y858 1186 aa14□□□□□ -0.17
RNF4-206ENST00000504782 C8AP07357 584 aa14□□□□□ -0.17
RNF4-206ENST00000504782 CFHP08603 1231 aa14□□□□□ -0.17
RNF4-206ENST00000504782 LAMP2P13473 410 aa14□□□□□ -0.17
RNF4-206ENST00000504782 MCM2P49736 904 aa14□□□□□ -0.17
RNF4-206ENST00000504782 YARSP54577 528 aaKnown RBP14□□□□□ -0.17
RNF4-206ENST00000504782 PTPN5P54829 565 aa14□□□□□ -0.17
RNF4-206ENST00000504782 CREMQ03060 361 aa14□□□□□ -0.17
RNF4-206ENST00000504782 RAB33AQ14088 237 aa14□□□□□ -0.17
RNF4-206ENST00000504782 MCM6Q14566 821 aa14□□□□□ -0.17
RNF4-206ENST00000504782 KARSQ15046 597 aaKnown RBP14□□□□□ -0.17
RNF4-206ENST00000504782 SF3A1Q15459 793 aaKnown RBP14□□□□□ -0.17
RNF4-206ENST00000504782 CYP26C1Q6V0L0 522 aa14□□□□□ -0.17
RNF4-206ENST00000504782 USP49Q70CQ1 688 aa14□□□□□ -0.17
RNF4-206ENST00000504782 SLC44A3Q8N4M1 653 aa14□□□□□ -0.17
RNF4-206ENST00000504782 SLC7A14Q8TBB6 771 aa14□□□□□ -0.17
RNF4-206ENST00000504782 CDK5RAP3Q96JB5 506 aa14□□□□□ -0.17
RNF4-206ENST00000504782 REEP2Q9BRK0 252 aa14□□□□□ -0.17
RNF4-206ENST00000504782 TIPINQ9BVW5 301 aa14□□□□□ -0.17
RNF4-206ENST00000504782 C17orf75Q9HAS0 396 aa14□□□□□ -0.17
RNF4-206ENST00000504782 CNTN3Q9P232 1028 aa14□□□□□ -0.17
RNF4-206ENST00000504782 CDY1Q9Y6F8 540 aa14□□□□□ -0.17
RNF4-206ENST00000504782 PODXLO00592 558 aa13.99□□□□□ -0.17
RNF4-206ENST00000504782 KCNE1P15382 129 aa13.99□□□□□ -0.17
RNF4-206ENST00000504782 PLCG1P19174 1290 aa13.99□□□□□ -0.17
RNF4-206ENST00000504782 TNFSF9P41273 254 aa13.99□□□□□ -0.17
RNF4-206ENST00000504782 NCKAP1LP55160 1127 aa13.99□□□□□ -0.17
RNF4-206ENST00000504782 ELAVL2Q12926 359 aaKnown RBP13.99□□□□□ -0.17
RNF4-206ENST00000504782 CUL4AQ13619 759 aa13.99□□□□□ -0.17
RNF4-206ENST00000504782 SPECC1Q5M775 1068 aa13.99□□□□□ -0.17
RNF4-206ENST00000504782 PPM1LQ5SGD2 360 aa13.99□□□□□ -0.17
RNF4-206ENST00000504782 ZBTB41Q5SVQ8 909 aa13.99□□□□□ -0.17
RNF4-206ENST00000504782 AXDND1Q5T1B0 1012 aaPredicted RBP13.99□□□□□ -0.17
RNF4-206ENST00000504782 ASTLQ6HA08 431 aaPredicted RBP13.99□□□□□ -0.17
RNF4-206ENST00000504782 FAM173BQ6P4H8 233 aa13.99□□□□□ -0.17
RNF4-206ENST00000504782 ELMSAN1Q6PJG2 1045 aa13.99□□□□□ -0.17
RNF4-206ENST00000504782 POTEHQ6S545 545 aa13.99□□□□□ -0.17
RNF4-206ENST00000504782 APBB1IPQ7Z5R6 666 aaPredicted RBP13.99□□□□□ -0.17
RNF4-206ENST00000504782 GPBP1Q86WP2 473 aa13.99□□□□□ -0.17
RNF4-206ENST00000504782 SIX5Q8N196 739 aa13.99□□□□□ -0.17
RNF4-206ENST00000504782 FLCNQ8NFG4 579 aa13.99□□□□□ -0.17
RNF4-206ENST00000504782 ITFG1Q8TB96 612 aa13.99□□□□□ -0.17
RNF4-206ENST00000504782 STAMQ92783 540 aa13.99□□□□□ -0.17
RNF4-206ENST00000504782 UROC1Q96N76 676 aa13.99□□□□□ -0.17
RNF4-206ENST00000504782 TOPORSQ9NS56 1045 aaPredicted RBP13.99□□□□□ -0.17
RNF4-206ENST00000504782 IGSF9Q9P2J2 1179 aa13.99□□□□□ -0.17
RNF4-206ENST00000504782 TUBGCP4Q9UGJ1 667 aa13.99□□□□□ -0.17
RNF4-206ENST00000504782 POLIQ9UNA4 740 aa13.99□□□□□ -0.17
RNF4-206ENST00000504782 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.99□□□□□ -0.17
RNF4-206ENST00000504782 CLIC4Q9Y696 253 aa13.99□□□□□ -0.17
RNF4-206ENST00000504782 VPS37CA5D8V6 355 aaPredicted RBP13.98□□□□□ -0.17
RNF4-206ENST00000504782 KRBA1A5PL33 1030 aa13.98□□□□□ -0.17
RNF4-206ENST00000504782 TOM1L1O75674 476 aa13.98□□□□□ -0.17
RNF4-206ENST00000504782 CXCL8P10145 99 aa13.98□□□□□ -0.17
RNF4-206ENST00000504782 FSHRP23945 695 aa13.98□□□□□ -0.17
RNF4-206ENST00000504782 MCL1Q07820 350 aa13.98□□□□□ -0.17
RNF4-206ENST00000504782 STRN3Q13033 797 aa13.98□□□□□ -0.17
RNF4-206ENST00000504782 NOLC1Q14978 699 aaKnown RBP eCLIP13.98□□□□□ -0.17
RNF4-206ENST00000504782 VARS2Q5ST30 1063 aaKnown RBP13.98□□□□□ -0.17
RNF4-206ENST00000504782 HAUS6Q7Z4H7 955 aa13.98□□□□□ -0.17
RNF4-206ENST00000504782 FGF14Q92915 247 aa13.98□□□□□ -0.17
RNF4-206ENST00000504782 EPSTI1Q96J88 318 aa13.98□□□□□ -0.17
RNF4-206ENST00000504782 IKZF4Q9H2S9 585 aa13.98□□□□□ -0.17
RNF4-206ENST00000504782 MFSD1Q9H3U5 465 aa13.98□□□□□ -0.17
RNF4-206ENST00000504782 DNMT3BQ9UBC3 853 aaKnown RBP13.98□□□□□ -0.17
RNF4-206ENST00000504782 CA14Q9ULX7 337 aa13.98□□□□□ -0.17
RNF4-206ENST00000504782 WDR27A2RRH5 827 aa13.97□□□□□ -0.17
RNF4-206ENST00000504782 ANHXE9PGG2 379 aa13.97□□□□□ -0.17
RNF4-206ENST00000504782 NRG2O14511 850 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms