RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 TPP2P29144 1249 aaPredicted RBP2.99□□□□□ -1.93
NEDD4-204ENST00000503468 MGAT3Q09327 533 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 PRPF4BQ13523 1007 aaKnown RBP2.99□□□□□ -1.93
NEDD4-204ENST00000503468 GBX1Q14549 363 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 GNPTABQ3T906 1256 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 WASHC2DQ5SRD0 308 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 C17orf99Q6UX52 265 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 PPP1R3FQ6ZSY5 799 aaPredicted RBP2.99□□□□□ -1.93
NEDD4-204ENST00000503468 IRF2BP2Q7Z5L9 587 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 NOSTRINQ8IVI9 506 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 TRIM22Q8IYM9 498 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 SMYD1Q8NB12 490 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 EPAS1Q99814 870 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 ESF1Q9H501 851 aaKnown RBP2.99□□□□□ -1.93
NEDD4-204ENST00000503468 ZSWIM4Q9H7M6 989 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 RMI1Q9H9A7 625 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 FAM114A2Q9NRY5 505 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 KLHL14Q9P2G3 628 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 MTRF1LQ9UGC7 380 aaKnown RBP2.99□□□□□ -1.93
NEDD4-204ENST00000503468 TLK1Q9UKI8 766 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 PCDHA5Q9Y5H7 936 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 BPTFQ12830 3046 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 E7EVH7 732 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 TRAPPC3O43617 180 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 ALOX15P16050 662 aaPredicted RBP2.99□□□□□ -1.93
NEDD4-204ENST00000503468 ITGB5P18084 799 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 TYK2P29597 1187 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 CTCFP49711 727 aaPredicted RBP2.99□□□□□ -1.93
NEDD4-204ENST00000503468 PLCB3Q01970 1234 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 NR1H3Q13133 447 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 E2F5Q15329 346 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 NDUFA5Q16718 116 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 ZNF792Q3KQV3 632 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 TBC1D25Q3MII6 688 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 STXBP5Q5T5C0 1151 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 SPTY2D1Q68D10 685 aaPredicted RBP2.99□□□□□ -1.93
NEDD4-204ENST00000503468 CWC27Q6UX04 472 aaKnown RBP2.99□□□□□ -1.93
NEDD4-204ENST00000503468 XKR5Q6UX68 686 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 TMEM179Q6ZVK1 233 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 CDC37L1Q7L3B6 337 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 VPS36Q86VN1 386 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 MAP4K3Q8IVH8 894 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 ALDH16A1Q8IZ83 802 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 ZBTB10Q96DT7 871 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 AGAP3Q96P47 875 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 GORASP1Q9BQQ3 440 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 PLVAPQ9BX97 442 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 RAB17Q9H0T7 212 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 SLITRK6Q9H5Y7 841 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 HAUS2Q9NVX0 235 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 POLIQ9UNA4 740 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 LRRC42Q9Y546 428 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 MAGEA13PA6NCF6 341 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 NUTM2BA6NNL0 878 aaPredicted RBP2.98□□□□□ -1.93
NEDD4-204ENST00000503468 GOLGA8AA7E2F4 631 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 NUTM2EB1AL46 878 aaPredicted RBP2.98□□□□□ -1.93
NEDD4-204ENST00000503468 BIN1O00499 593 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 NDC80O14777 642 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 PSMA7O14818 248 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 PAPSS1O43252 624 aaPredicted RBP2.98□□□□□ -1.93
NEDD4-204ENST00000503468 ADAMTS4O75173 837 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 NDUFA10O95299 355 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 ANP32DO95626 131 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 GSRP00390 522 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 ATP4AP20648 1035 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 ITGA6P23229 1130 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 HTR7P34969 479 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 GGCXP38435 758 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 IARSP41252 1262 aaKnown RBP2.98□□□□□ -1.93
NEDD4-204ENST00000503468 SCTRP47872 440 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 ZNF135P52742 658 aaPredicted RBP2.98□□□□□ -1.93
NEDD4-204ENST00000503468 KIF22Q14807 665 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 KRT71Q3SY84 523 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 FKBP15Q5T1M5 1219 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 MEX3CQ5U5Q3 659 aaKnown RBP2.98□□□□□ -1.93
NEDD4-204ENST00000503468 ANKRD35Q8N283 1001 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 INPP5DQ92835 1189 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 VPS50Q96JG6 964 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 LRGUKQ96M69 825 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 YIPF3Q9GZM5 350 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 RNPEPL1Q9HAU8 725 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 LZTFL1Q9NQ48 299 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 LATS2Q9NRM7 1088 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 GDAP2Q9NXN4 497 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 GALNT8Q9NY28 637 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 SENP1Q9P0U3 644 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 KLHL42Q9P2K6 505 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 DNAJB4Q9UDY4 337 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 BCAP29Q9UHQ4 241 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 SNX12Q9UMY4 172 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 PCDHA7Q9UN72 937 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 SEC23IPQ9Y6Y8 1000 aaKnown RBP2.98□□□□□ -1.93
NEDD4-204ENST00000503468 ITPR1Q14643 2758 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 ARPC4-TTLL3A0A0A6YYG9 625 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 DYTNA2CJ06 578 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 KDM1AO60341 852 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 SMNDC1O75940 238 aaKnown RBP eCLIP2.98□□□□□ -1.93
NEDD4-204ENST00000503468 CLTAP09496 248 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 HOXB9P17482 250 aaPredicted RBP2.98□□□□□ -1.93
NEDD4-204ENST00000503468 KRT4P19013 534 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms