RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 BICD1Q96G01 975 aa21.28■■□□□ 1
UBE2D3-215ENST00000503418 ZMAT2Q96NC0 199 aaKnown RBP21.28■■□□□ 1
UBE2D3-215ENST00000503418 RHOBTB2Q9BYZ6 727 aa21.28■■□□□ 1
UBE2D3-215ENST00000503418 SLC38A7Q9NVC3 462 aa21.28■■□□□ 1
UBE2D3-215ENST00000503418 LARSQ9P2J5 1176 aaKnown RBP21.28■■□□□ 1
UBE2D3-215ENST00000503418 FBXW11Q9UKB1 542 aa21.28■■□□□ 1
UBE2D3-215ENST00000503418 PDCD11Q14690 1871 aaKnown RBP21.27■■□□□ 1
UBE2D3-215ENST00000503418 I3L4J1 428 aa21.27■■□□□ 1
UBE2D3-215ENST00000503418 ADAM12O43184 909 aa21.27■■□□□ 1
UBE2D3-215ENST00000503418 N4BP1O75113 896 aaKnown RBP21.27■■□□□ 1
UBE2D3-215ENST00000503418 TOM1L1O75674 476 aa21.27■■□□□ 1
UBE2D3-215ENST00000503418 ZMYND10O75800 440 aa21.27■■□□□ 1
UBE2D3-215ENST00000503418 PLCG1P19174 1290 aa21.27■■□□□ 1
UBE2D3-215ENST00000503418 PDCP20941 246 aa21.27■■□□□ 1
UBE2D3-215ENST00000503418 LONP1P36776 959 aaKnown RBP21.27■■□□□ 1
UBE2D3-215ENST00000503418 BRCC3P46736 316 aa21.27■■□□□ 1
UBE2D3-215ENST00000503418 VCPP55072 806 aaKnown RBP21.27■■□□□ 1
UBE2D3-215ENST00000503418 KARSQ15046 597 aaKnown RBP21.27■■□□□ 1
UBE2D3-215ENST00000503418 SEZ6Q53EL9 994 aa21.27■■□□□ 1
UBE2D3-215ENST00000503418 XKR4Q5GH76 650 aa21.27■■□□□ 1
UBE2D3-215ENST00000503418 LIN9Q5TKA1 542 aa21.27■■□□□ 1
UBE2D3-215ENST00000503418 C3orf58Q8NDZ4 430 aa21.27■■□□□ 1
UBE2D3-215ENST00000503418 LRRC15Q8TF66 581 aa21.27■■□□□ 1
UBE2D3-215ENST00000503418 REEP2Q9BRK0 252 aa21.27■■□□□ 1
UBE2D3-215ENST00000503418 PRKD2Q9BZL6 878 aa21.27■■□□□ 1
UBE2D3-215ENST00000503418 ZDBF2Q9HCK1 2354 aa21.27■■□□□ 1
UBE2D3-215ENST00000503418 H0YCG3 227 aa21.26■□□□□ 0.99
UBE2D3-215ENST00000503418 PODXLO00592 558 aa21.26■□□□□ 0.99
UBE2D3-215ENST00000503418 TRAPPC3O43617 180 aa21.26■□□□□ 0.99
UBE2D3-215ENST00000503418 FGFR3P22607 806 aa21.26■□□□□ 0.99
UBE2D3-215ENST00000503418 TKTP29401 623 aaKnown RBP21.26■□□□□ 0.99
UBE2D3-215ENST00000503418 HOXD11P31277 338 aaPredicted RBP21.26■□□□□ 0.99
UBE2D3-215ENST00000503418 NHLH1Q02575 133 aa21.26■□□□□ 0.99
UBE2D3-215ENST00000503418 MCM6Q14566 821 aa21.26■□□□□ 0.99
UBE2D3-215ENST00000503418 GET4Q7L5D6 327 aaPredicted RBP21.26■□□□□ 0.99
UBE2D3-215ENST00000503418 DDX27Q96GQ7 796 aaKnown RBP21.26■□□□□ 0.99
UBE2D3-215ENST00000503418 KCNK12Q9HB15 430 aa21.26■□□□□ 0.99
UBE2D3-215ENST00000503418 CNTN3Q9P232 1028 aa21.26■□□□□ 0.99
UBE2D3-215ENST00000503418 ODF2LQ9ULJ1 636 aa21.26■□□□□ 0.99
UBE2D3-215ENST00000503418 DOCK6Q96HP0 2047 aa21.26■□□□□ 0.99
UBE2D3-215ENST00000503418 DOCK8Q8NF50 2099 aa21.25■□□□□ 0.99
UBE2D3-215ENST00000503418 K7ENM7 598 aa21.25■□□□□ 0.99
UBE2D3-215ENST00000503418 CLDN3O15551 220 aa21.25■□□□□ 0.99
UBE2D3-215ENST00000503418 FAM13AO94988 1023 aa21.25■□□□□ 0.99
UBE2D3-215ENST00000503418 KRT18P05783 430 aaKnown RBP21.25■□□□□ 0.99
UBE2D3-215ENST00000503418 C8AP07357 584 aa21.25■□□□□ 0.99
UBE2D3-215ENST00000503418 KCNE1P15382 129 aa21.25■□□□□ 0.99
UBE2D3-215ENST00000503418 OR1D2P34982 312 aa21.25■□□□□ 0.99
UBE2D3-215ENST00000503418 NCKAP1LP55160 1127 aa21.25■□□□□ 0.99
UBE2D3-215ENST00000503418 TDGQ13569 410 aa21.25■□□□□ 0.99
UBE2D3-215ENST00000503418 PPM1LQ5SGD2 360 aa21.25■□□□□ 0.99
UBE2D3-215ENST00000503418 CD300LGQ6UXG3 332 aa21.25■□□□□ 0.99
UBE2D3-215ENST00000503418 ZPBP2Q6X784 338 aa21.25■□□□□ 0.99
UBE2D3-215ENST00000503418 HAUS6Q7Z4H7 955 aa21.25■□□□□ 0.99
UBE2D3-215ENST00000503418 MYCT1Q8N699 235 aa21.25■□□□□ 0.99
UBE2D3-215ENST00000503418 PRSS33Q8NF86 280 aa21.25■□□□□ 0.99
UBE2D3-215ENST00000503418 RAD54LQ92698 747 aa21.25■□□□□ 0.99
UBE2D3-215ENST00000503418 C18orf25Q96B23 403 aaPredicted RBP21.25■□□□□ 0.99
UBE2D3-215ENST00000503418 MYADMQ96S97 322 aa21.25■□□□□ 0.99
UBE2D3-215ENST00000503418 ZHX3Q9H4I2 956 aa21.25■□□□□ 0.99
UBE2D3-215ENST00000503418 BLOC1S4Q9NUP1 217 aa21.25■□□□□ 0.99
UBE2D3-215ENST00000503418 MTRRQ9UBK8 725 aa21.25■□□□□ 0.99
UBE2D3-215ENST00000503418 CLIC4Q9Y696 253 aa21.25■□□□□ 0.99
UBE2D3-215ENST00000503418 PAPLNO95428 1278 aa21.24■□□□□ 0.99
UBE2D3-215ENST00000503418 AVPR2P30518 371 aa21.24■□□□□ 0.99
UBE2D3-215ENST00000503418 MCL1Q07820 350 aa21.24■□□□□ 0.99
UBE2D3-215ENST00000503418 PRRX2Q99811 253 aa21.24■□□□□ 0.99
UBE2D3-215ENST00000503418 MFSD1Q9H3U5 465 aa21.24■□□□□ 0.99
UBE2D3-215ENST00000503418 FOXD4L1Q9NU39 408 aa21.24■□□□□ 0.99
UBE2D3-215ENST00000503418 POLIQ9UNA4 740 aa21.24■□□□□ 0.99
UBE2D3-215ENST00000503418 CDY1Q9Y6F8 540 aa21.24■□□□□ 0.99
UBE2D3-215ENST00000503418 MEFVO15553 781 aaPredicted RBP21.23■□□□□ 0.99
UBE2D3-215ENST00000503418 CXCL8P10145 99 aa21.23■□□□□ 0.99
UBE2D3-215ENST00000503418 MARCKSP29966 332 aaPredicted RBP21.23■□□□□ 0.99
UBE2D3-215ENST00000503418 LIG4P49917 911 aa21.23■□□□□ 0.99
UBE2D3-215ENST00000503418 RAB33AQ14088 237 aa21.23■□□□□ 0.99
UBE2D3-215ENST00000503418 SLC10A6Q3KNW5 377 aa21.23■□□□□ 0.99
UBE2D3-215ENST00000503418 SPECC1Q5M775 1068 aa21.23■□□□□ 0.99
UBE2D3-215ENST00000503418 ANKS3Q6ZW76 656 aa21.23■□□□□ 0.99
UBE2D3-215ENST00000503418 GRASPQ7Z6J2 395 aaPredicted RBP21.23■□□□□ 0.99
UBE2D3-215ENST00000503418 ALYREFQ86V81 257 aaKnown RBP21.23■□□□□ 0.99
UBE2D3-215ENST00000503418 SLC7A14Q8TBB6 771 aa21.23■□□□□ 0.99
UBE2D3-215ENST00000503418 RSAD2Q8WXG1 361 aa21.23■□□□□ 0.99
UBE2D3-215ENST00000503418 BACH2Q9BYV9 841 aa21.23■□□□□ 0.99
UBE2D3-215ENST00000503418 PARVGQ9HBI0 331 aa21.23■□□□□ 0.99
UBE2D3-215ENST00000503418 IGSF9Q9P2J2 1179 aa21.23■□□□□ 0.99
UBE2D3-215ENST00000503418 EPS15L1Q9UBC2 864 aa21.23■□□□□ 0.99
UBE2D3-215ENST00000503418 DUSP12Q9UNI6 340 aa21.23■□□□□ 0.99
UBE2D3-215ENST00000503418 NUB1Q9Y5A7 615 aa21.23■□□□□ 0.99
UBE2D3-215ENST00000503418 HNRNPDLO14979 420 aaKnown RBP21.22■□□□□ 0.99
UBE2D3-215ENST00000503418 CCL16O15467 120 aa21.22■□□□□ 0.99
UBE2D3-215ENST00000503418 TBCAO75347 108 aaKnown RBP21.22■□□□□ 0.99
UBE2D3-215ENST00000503418 HNRNPA1P09651 372 aaKnown RBP eCLIP21.22■□□□□ 0.99
UBE2D3-215ENST00000503418 SYT1P21579 422 aa21.22■□□□□ 0.99
UBE2D3-215ENST00000503418 PTPN5P54829 565 aa21.22■□□□□ 0.99
UBE2D3-215ENST00000503418 AXDND1Q5T1B0 1012 aaPredicted RBP21.22■□□□□ 0.99
UBE2D3-215ENST00000503418 FAM173BQ6P4H8 233 aa21.22■□□□□ 0.99
UBE2D3-215ENST00000503418 RSPO2Q6UXX9 243 aaPredicted RBP21.22■□□□□ 0.99
UBE2D3-215ENST00000503418 LARP4BQ92615 738 aaKnown RBP21.22■□□□□ 0.99
UBE2D3-215ENST00000503418 CCSER1Q9C0I3 900 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms