RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 MCM6Q14566 821 aa17.8■□□□□ 0.44
SCLT1-204ENST00000503215 KARSQ15046 597 aaKnown RBP17.8■□□□□ 0.44
SCLT1-204ENST00000503215 SLC10A6Q3KNW5 377 aa17.8■□□□□ 0.44
SCLT1-204ENST00000503215 FAM173BQ6P4H8 233 aa17.8■□□□□ 0.44
SCLT1-204ENST00000503215 USP49Q70CQ1 688 aa17.8■□□□□ 0.44
SCLT1-204ENST00000503215 APBB1IPQ7Z5R6 666 aaPredicted RBP17.8■□□□□ 0.44
SCLT1-204ENST00000503215 ALYREFQ86V81 257 aaKnown RBP17.8■□□□□ 0.44
SCLT1-204ENST00000503215 ACAP3Q96P50 834 aa17.8■□□□□ 0.44
SCLT1-204ENST00000503215 REEP2Q9BRK0 252 aa17.8■□□□□ 0.44
SCLT1-204ENST00000503215 RHOBTB2Q9BYZ6 727 aa17.8■□□□□ 0.44
SCLT1-204ENST00000503215 PIDD1Q9HB75 910 aa17.8■□□□□ 0.44
SCLT1-204ENST00000503215 ANKFY1Q9P2R3 1169 aa17.8■□□□□ 0.44
SCLT1-204ENST00000503215 FBXW11Q9UKB1 542 aa17.8■□□□□ 0.44
SCLT1-204ENST00000503215 CLIC4Q9Y696 253 aa17.8■□□□□ 0.44
SCLT1-204ENST00000503215 MTCL1Q9Y4B5 1905 aaKnown RBP17.8■□□□□ 0.44
SCLT1-204ENST00000503215 NARSO43776 548 aaKnown RBP17.79■□□□□ 0.44
SCLT1-204ENST00000503215 C1RP00736 705 aa17.79■□□□□ 0.44
SCLT1-204ENST00000503215 KCNE1P15382 129 aa17.79■□□□□ 0.44
SCLT1-204ENST00000503215 PLCG1P19174 1290 aa17.79■□□□□ 0.44
SCLT1-204ENST00000503215 GBP2P32456 591 aaPredicted RBP17.79■□□□□ 0.44
SCLT1-204ENST00000503215 OR1D2P34982 312 aa17.79■□□□□ 0.44
SCLT1-204ENST00000503215 UBA7P41226 1012 aa17.79■□□□□ 0.44
SCLT1-204ENST00000503215 YARSP54577 528 aaKnown RBP17.79■□□□□ 0.44
SCLT1-204ENST00000503215 TCF15Q12870 199 aa17.79■□□□□ 0.44
SCLT1-204ENST00000503215 ELAVL2Q12926 359 aaKnown RBP17.79■□□□□ 0.44
SCLT1-204ENST00000503215 SPECC1Q5M775 1068 aa17.79■□□□□ 0.44
SCLT1-204ENST00000503215 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.79■□□□□ 0.44
SCLT1-204ENST00000503215 GPBP1Q86WP2 473 aa17.79■□□□□ 0.44
SCLT1-204ENST00000503215 AK8Q96MA6 479 aa17.79■□□□□ 0.44
SCLT1-204ENST00000503215 KCNH6Q9H252 994 aa17.79■□□□□ 0.44
SCLT1-204ENST00000503215 ZDHHC7Q9NXF8 308 aa17.79■□□□□ 0.44
SCLT1-204ENST00000503215 DPP7Q9UHL4 492 aa17.79■□□□□ 0.44
SCLT1-204ENST00000503215 DOCK8Q8NF50 2099 aa17.79■□□□□ 0.44
SCLT1-204ENST00000503215 TOM1L1O75674 476 aa17.79■□□□□ 0.44
SCLT1-204ENST00000503215 CREMQ03060 361 aa17.79■□□□□ 0.44
SCLT1-204ENST00000503215 SPAG1Q07617 926 aa17.79■□□□□ 0.44
SCLT1-204ENST00000503215 STRN3Q13033 797 aa17.79■□□□□ 0.44
SCLT1-204ENST00000503215 TDGQ13569 410 aa17.79■□□□□ 0.44
SCLT1-204ENST00000503215 RAB33AQ14088 237 aa17.79■□□□□ 0.44
SCLT1-204ENST00000503215 PTPAQ15257 358 aa17.79■□□□□ 0.44
SCLT1-204ENST00000503215 ELMSAN1Q6PJG2 1045 aa17.79■□□□□ 0.44
SCLT1-204ENST00000503215 CYP26C1Q6V0L0 522 aa17.79■□□□□ 0.44
SCLT1-204ENST00000503215 BRAPQ7Z569 592 aa17.79■□□□□ 0.44
SCLT1-204ENST00000503215 DDX27Q96GQ7 796 aaKnown RBP17.79■□□□□ 0.44
SCLT1-204ENST00000503215 EPSTI1Q96J88 318 aa17.79■□□□□ 0.44
SCLT1-204ENST00000503215 TOPORSQ9NS56 1045 aaPredicted RBP17.79■□□□□ 0.44
SCLT1-204ENST00000503215 FOXD4L1Q9NU39 408 aa17.79■□□□□ 0.44
SCLT1-204ENST00000503215 CNTN3Q9P232 1028 aa17.79■□□□□ 0.44
SCLT1-204ENST00000503215 MTRRQ9UBK8 725 aa17.79■□□□□ 0.44
SCLT1-204ENST00000503215 KMT2EQ8IZD2 1858 aa17.78■□□□□ 0.44
SCLT1-204ENST00000503215 CACNA1HO95180 2353 aa17.78■□□□□ 0.44
SCLT1-204ENST00000503215 PODXLO00592 558 aa17.78■□□□□ 0.44
SCLT1-204ENST00000503215 CCL16O15467 120 aa17.78■□□□□ 0.44
SCLT1-204ENST00000503215 C8AP07357 584 aa17.78■□□□□ 0.44
SCLT1-204ENST00000503215 MARCKSP29966 332 aaPredicted RBP17.78■□□□□ 0.44
SCLT1-204ENST00000503215 SMTNP53814 917 aa17.78■□□□□ 0.44
SCLT1-204ENST00000503215 NCKAP1LP55160 1127 aa17.78■□□□□ 0.44
SCLT1-204ENST00000503215 NOLC1Q14978 699 aaKnown RBP eCLIP17.78■□□□□ 0.44
SCLT1-204ENST00000503215 ZBTB41Q5SVQ8 909 aa17.78■□□□□ 0.44
SCLT1-204ENST00000503215 GET4Q7L5D6 327 aaPredicted RBP17.78■□□□□ 0.44
SCLT1-204ENST00000503215 HAUS6Q7Z4H7 955 aa17.78■□□□□ 0.44
SCLT1-204ENST00000503215 GRASPQ7Z6J2 395 aaPredicted RBP17.78■□□□□ 0.44
SCLT1-204ENST00000503215 KCTD17Q8N5Z5 321 aa17.78■□□□□ 0.44
SCLT1-204ENST00000503215 TMEM105Q8N8V8 129 aa17.78■□□□□ 0.44
SCLT1-204ENST00000503215 RAD54LQ92698 747 aa17.78■□□□□ 0.44
SCLT1-204ENST00000503215 CALML4Q96GE6 196 aa17.78■□□□□ 0.44
SCLT1-204ENST00000503215 UROC1Q96N76 676 aa17.78■□□□□ 0.44
SCLT1-204ENST00000503215 KCND2Q9NZV8 630 aa17.78■□□□□ 0.44
SCLT1-204ENST00000503215 EPS15L1Q9UBC2 864 aa17.78■□□□□ 0.44
SCLT1-204ENST00000503215 CDY1Q9Y6F8 540 aa17.78■□□□□ 0.44
SCLT1-204ENST00000503215 MYH11P35749 1972 aa17.77■□□□□ 0.43
SCLT1-204ENST00000503215 CXCL8P10145 99 aa17.77■□□□□ 0.43
SCLT1-204ENST00000503215 SYT1P21579 422 aa17.77■□□□□ 0.43
SCLT1-204ENST00000503215 TNFSF9P41273 254 aa17.77■□□□□ 0.43
SCLT1-204ENST00000503215 MCL1Q07820 350 aa17.77■□□□□ 0.43
SCLT1-204ENST00000503215 RESTQ13127 1097 aa17.77■□□□□ 0.43
SCLT1-204ENST00000503215 AXDND1Q5T1B0 1012 aaPredicted RBP17.77■□□□□ 0.43
SCLT1-204ENST00000503215 ZPBP2Q6X784 338 aa17.77■□□□□ 0.43
SCLT1-204ENST00000503215 MYCT1Q8N699 235 aa17.77■□□□□ 0.43
SCLT1-204ENST00000503215 SLC7A14Q8TBB6 771 aa17.77■□□□□ 0.43
SCLT1-204ENST00000503215 BACH2Q9BYV9 841 aa17.77■□□□□ 0.43
SCLT1-204ENST00000503215 HCFC1R1Q9NWW0 138 aa17.77■□□□□ 0.43
SCLT1-204ENST00000503215 TUBGCP4Q9UGJ1 667 aa17.77■□□□□ 0.43
SCLT1-204ENST00000503215 CLDN3O15551 220 aa17.76■□□□□ 0.43
SCLT1-204ENST00000503215 LAMP2P13473 410 aa17.76■□□□□ 0.43
SCLT1-204ENST00000503215 LONP1P36776 959 aaKnown RBP17.76■□□□□ 0.43
SCLT1-204ENST00000503215 ZNF131P52739 623 aa17.76■□□□□ 0.43
SCLT1-204ENST00000503215 PPM1LQ5SGD2 360 aa17.76■□□□□ 0.43
SCLT1-204ENST00000503215 SLC44A3Q8N4M1 653 aa17.76■□□□□ 0.43
SCLT1-204ENST00000503215 STAMQ92783 540 aa17.76■□□□□ 0.43
SCLT1-204ENST00000503215 CLIC6Q96NY7 704 aa17.76■□□□□ 0.43
SCLT1-204ENST00000503215 FIZ1Q96SL8 496 aa17.76■□□□□ 0.43
SCLT1-204ENST00000503215 RPP25Q9BUL9 199 aaKnown RBP17.76■□□□□ 0.43
SCLT1-204ENST00000503215 SLC38A7Q9NVC3 462 aa17.76■□□□□ 0.43
SCLT1-204ENST00000503215 LARSQ9P2J5 1176 aaKnown RBP17.76■□□□□ 0.43
SCLT1-204ENST00000503215 DUSP12Q9UNI6 340 aa17.76■□□□□ 0.43
SCLT1-204ENST00000503215 BACE2Q9Y5Z0 518 aa17.76■□□□□ 0.43
SCLT1-204ENST00000503215 SLC26A4O43511 780 aa17.75■□□□□ 0.43
SCLT1-204ENST00000503215 FAM13AO94988 1023 aa17.75■□□□□ 0.43
SCLT1-204ENST00000503215 BMP15O95972 392 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms