RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 SPICE1Q8N0Z3 855 aa18.2■□□□□ 0.5
HMGXB3-201ENST00000502717 CXorf38Q8TB03 319 aa18.2■□□□□ 0.5
HMGXB3-201ENST00000502717 THTPAQ9BU02 230 aa18.2■□□□□ 0.5
HMGXB3-201ENST00000502717 ZNF711Q9Y462 761 aa18.2■□□□□ 0.5
HMGXB3-201ENST00000502717 CCDC195A0A1B0GUA6 201 aa18.2■□□□□ 0.5
HMGXB3-201ENST00000502717 ALDH5A1P51649 535 aaPredicted RBP18.2■□□□□ 0.5
HMGXB3-201ENST00000502717 THOC5Q13769 683 aaKnown RBP18.2■□□□□ 0.5
HMGXB3-201ENST00000502717 JADE1Q6IE81 842 aa18.2■□□□□ 0.5
HMGXB3-201ENST00000502717 C16orf87Q6PH81 154 aa18.2■□□□□ 0.5
HMGXB3-201ENST00000502717 NCAPG2Q86XI2 1143 aa18.2■□□□□ 0.5
HMGXB3-201ENST00000502717 MFN1Q8IWA4 741 aa18.2■□□□□ 0.5
HMGXB3-201ENST00000502717 ZNF571Q7Z3V5 609 aaPredicted RBP18.2■□□□□ 0.5
HMGXB3-201ENST00000502717 PCDHGC5Q9Y5F6 944 aa18.2■□□□□ 0.5
HMGXB3-201ENST00000502717 ZHX2Q9Y6X8 837 aa18.2■□□□□ 0.5
HMGXB3-201ENST00000502717 GOLGA8RI6L899 631 aa18.2■□□□□ 0.5
HMGXB3-201ENST00000502717 KRT7P08729 469 aa18.2■□□□□ 0.5
HMGXB3-201ENST00000502717 KRT10P13645 584 aa18.2■□□□□ 0.5
HMGXB3-201ENST00000502717 EEF1DP29692 281 aaKnown RBP18.2■□□□□ 0.5
HMGXB3-201ENST00000502717 CNGA3Q16281 694 aa18.2■□□□□ 0.5
HMGXB3-201ENST00000502717 RHPN2Q8IUC4 686 aa18.2■□□□□ 0.5
HMGXB3-201ENST00000502717 FBXL13Q8NEE6 735 aa18.2■□□□□ 0.5
HMGXB3-201ENST00000502717 SPATA20Q8TB22 786 aa18.2■□□□□ 0.5
HMGXB3-201ENST00000502717 CCDC124Q96CT7 223 aaKnown RBP18.2■□□□□ 0.5
HMGXB3-201ENST00000502717 CCDC138Q96M89 665 aa18.2■□□□□ 0.5
HMGXB3-201ENST00000502717 SEMA4AQ9H3S1 761 aa18.2■□□□□ 0.5
HMGXB3-201ENST00000502717 SMYD2Q9NRG4 433 aa18.2■□□□□ 0.5
HMGXB3-201ENST00000502717 ARHGAP23Q9P227 1491 aa18.19■□□□□ 0.5
HMGXB3-201ENST00000502717 STMN1P16949 149 aa18.19■□□□□ 0.5
HMGXB3-201ENST00000502717 PTPN4P29074 926 aa18.19■□□□□ 0.5
HMGXB3-201ENST00000502717 KPNA2P52292 529 aaKnown RBP18.19■□□□□ 0.5
HMGXB3-201ENST00000502717 DSG1Q02413 1049 aa18.19■□□□□ 0.5
HMGXB3-201ENST00000502717 ANKMY2Q8IV38 441 aa18.19■□□□□ 0.5
HMGXB3-201ENST00000502717 RCOR2Q8IZ40 523 aa18.19■□□□□ 0.5
HMGXB3-201ENST00000502717 IQCKQ8N0W5 287 aa18.19■□□□□ 0.5
HMGXB3-201ENST00000502717 MAGEC3Q8TD91 643 aa18.19■□□□□ 0.5
HMGXB3-201ENST00000502717 AP5M1Q9H0R1 490 aa18.19■□□□□ 0.5
HMGXB3-201ENST00000502717 THAP2Q9H0W7 228 aa18.19■□□□□ 0.5
HMGXB3-201ENST00000502717 CDC42EP4Q9H3Q1 356 aaKnown RBP18.19■□□□□ 0.5
HMGXB3-201ENST00000502717 MANSC1Q9H8J5 431 aa18.19■□□□□ 0.5
HMGXB3-201ENST00000502717 CYP26B1Q9NR63 512 aa18.19■□□□□ 0.5
HMGXB3-201ENST00000502717 KPNA7A9QM74 516 aa18.19■□□□□ 0.5
HMGXB3-201ENST00000502717 RAD17O75943 681 aa18.19■□□□□ 0.5
HMGXB3-201ENST00000502717 EEF1B2P24534 225 aaKnown RBP18.19■□□□□ 0.5
HMGXB3-201ENST00000502717 ERMARDQ5T6L9 678 aa18.19■□□□□ 0.5
HMGXB3-201ENST00000502717 ABL1P00519 1130 aa18.19■□□□□ 0.5
HMGXB3-201ENST00000502717 ITGA4P13612 1032 aa18.19■□□□□ 0.5
HMGXB3-201ENST00000502717 EN1Q05925 392 aaPredicted RBP18.19■□□□□ 0.5
HMGXB3-201ENST00000502717 SLC13A1Q9BZW2 595 aa18.19■□□□□ 0.5
HMGXB3-201ENST00000502717 PNMA3Q9UL41 463 aa18.19■□□□□ 0.5
HMGXB3-201ENST00000502717 STRIP2Q9ULQ0 834 aa18.19■□□□□ 0.5
HMGXB3-201ENST00000502717 TBX3O15119 743 aa18.19■□□□□ 0.5
HMGXB3-201ENST00000502717 MYBP10242 640 aa18.19■□□□□ 0.5
HMGXB3-201ENST00000502717 ALDH18A1P54886 795 aaKnown RBP18.19■□□□□ 0.5
HMGXB3-201ENST00000502717 SF3B3Q15393 1217 aaKnown RBP18.19■□□□□ 0.5
HMGXB3-201ENST00000502717 ACAD11Q709F0 780 aa18.19■□□□□ 0.5
HMGXB3-201ENST00000502717 PASD1Q8IV76 773 aa18.19■□□□□ 0.5
HMGXB3-201ENST00000502717 RBBP8NLQ8NC74 664 aaPredicted RBP18.19■□□□□ 0.5
HMGXB3-201ENST00000502717 ZMAT2Q96NC0 199 aaKnown RBP18.19■□□□□ 0.5
HMGXB3-201ENST00000502717 DBNDD1Q9H9R9 158 aa18.19■□□□□ 0.5
HMGXB3-201ENST00000502717 SEPT9Q9UHD8 586 aaPredicted RBP18.19■□□□□ 0.5
HMGXB3-201ENST00000502717 LRCH1Q9Y2L9 728 aa18.19■□□□□ 0.5
HMGXB3-201ENST00000502717 QRICH1Q2TAL8 776 aa18.18■□□□□ 0.5
HMGXB3-201ENST00000502717 ZCWPW2Q504Y3 356 aa18.18■□□□□ 0.5
HMGXB3-201ENST00000502717 EARS2Q5JPH6 523 aaKnown RBP18.18■□□□□ 0.5
HMGXB3-201ENST00000502717 TUFT1Q9NNX1 390 aa18.18■□□□□ 0.5
HMGXB3-201ENST00000502717 CD209Q9NNX6 404 aa18.18■□□□□ 0.5
HMGXB3-201ENST00000502717 REXO2Q9Y3B8 237 aaKnown RBP18.18■□□□□ 0.5
HMGXB3-201ENST00000502717 TTLL3Q9Y4R7 772 aa18.18■□□□□ 0.5
HMGXB3-201ENST00000502717 TCHHQ07283 1943 aa18.18■□□□□ 0.5
HMGXB3-201ENST00000502717 CD58P19256 250 aa18.18■□□□□ 0.5
HMGXB3-201ENST00000502717 RSBN1LQ6PCB5 846 aaPredicted RBP18.18■□□□□ 0.5
HMGXB3-201ENST00000502717 TMEM270Q6UE05 265 aa18.18■□□□□ 0.5
HMGXB3-201ENST00000502717 LRRC36Q1X8D7 754 aa18.18■□□□□ 0.5
HMGXB3-201ENST00000502717 SLFN12LQ6IEE8 588 aa18.18■□□□□ 0.5
HMGXB3-201ENST00000502717 AGAP11Q8TF27 550 aa18.18■□□□□ 0.5
HMGXB3-201ENST00000502717 ANKRD36BP1Q96IX9 119 aa18.18■□□□□ 0.5
HMGXB3-201ENST00000502717 PARVAQ9NVD7 372 aa18.18■□□□□ 0.5
HMGXB3-201ENST00000502717 PI4KBQ9UBF8 816 aa18.18■□□□□ 0.5
HMGXB3-201ENST00000502717 SPATA31A1Q5TZJ5 1347 aa18.18■□□□□ 0.5
HMGXB3-201ENST00000502717 RCCD1A6NED2 376 aa18.18■□□□□ 0.5
HMGXB3-201ENST00000502717 EIF3DO15371 548 aaKnown RBP eCLIP18.18■□□□□ 0.5
HMGXB3-201ENST00000502717 CCDC92Q53HC0 331 aaPredicted RBP18.18■□□□□ 0.5
HMGXB3-201ENST00000502717 CAMTA2O94983 1202 aa18.17■□□□□ 0.5
HMGXB3-201ENST00000502717 TRIP10Q15642 601 aa18.17■□□□□ 0.5
HMGXB3-201ENST00000502717 BTBD6Q96KE9 485 aa18.17■□□□□ 0.5
HMGXB3-201ENST00000502717 RIPK2O43353 540 aa18.17■□□□□ 0.5
HMGXB3-201ENST00000502717 LDHAP00338 332 aaKnown RBP18.17■□□□□ 0.5
HMGXB3-201ENST00000502717 RC3H1Q5TC82 1133 aaKnown RBP18.17■□□□□ 0.5
HMGXB3-201ENST00000502717 MIGA2Q7L4E1 593 aa18.17■□□□□ 0.5
HMGXB3-201ENST00000502717 C1orf131Q8NDD1 294 aaKnown RBP18.17■□□□□ 0.5
HMGXB3-201ENST00000502717 SLC7A3Q8WY07 619 aa18.17■□□□□ 0.5
HMGXB3-201ENST00000502717 KCNK16Q96T55 309 aa18.17■□□□□ 0.5
HMGXB3-201ENST00000502717 ERFP50548 548 aa18.17■□□□□ 0.5
HMGXB3-201ENST00000502717 MARCH10Q8NA82 808 aaPredicted RBP18.17■□□□□ 0.5
HMGXB3-201ENST00000502717 KIAA0895Q8NCT3 520 aa18.17■□□□□ 0.5
HMGXB3-201ENST00000502717 STK32AQ8WU08 396 aa18.17■□□□□ 0.5
HMGXB3-201ENST00000502717 HSPH1Q92598 858 aa18.17■□□□□ 0.5
HMGXB3-201ENST00000502717 TRIM15Q9C019 465 aa18.17■□□□□ 0.5
HMGXB3-201ENST00000502717 TRPV6Q9H1D0 765 aa18.17■□□□□ 0.5
HMGXB3-201ENST00000502717 NRBP2Q9NSY0 501 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms