RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	TRIM14	Q14142	442 aa		13.16	□□□□□ -0.3
MATR3-231	ENST00000502394	ARID5B	Q14865	1188 aa		13.16	□□□□□ -0.3
MATR3-231	ENST00000502394	EXOC3L4	Q17RC7	722 aa		13.16	□□□□□ -0.3
MATR3-231	ENST00000502394	ZACN	Q401N2	412 aa		13.16	□□□□□ -0.3
MATR3-231	ENST00000502394	XKR4	Q5GH76	650 aa		13.16	□□□□□ -0.3
MATR3-231	ENST00000502394	KRT39	Q6A163	491 aa		13.16	□□□□□ -0.3
MATR3-231	ENST00000502394	ALKAL1	Q6UXT8	129 aa		13.16	□□□□□ -0.3
MATR3-231	ENST00000502394	GBP6	Q6ZN66	633 aa		13.16	□□□□□ -0.3
MATR3-231	ENST00000502394	FAM43B	Q6ZT52	329 aa	Predicted RBP	13.16	□□□□□ -0.3
MATR3-231	ENST00000502394	SV2A	Q7L0J3	742 aa		13.16	□□□□□ -0.3
MATR3-231	ENST00000502394	NECAB2	Q7Z6G3	386 aa		13.16	□□□□□ -0.3
MATR3-231	ENST00000502394	MRPL10	Q7Z7H8	261 aa	Known RBP	13.16	□□□□□ -0.3
MATR3-231	ENST00000502394	WDR49	Q8IV35	697 aa		13.16	□□□□□ -0.3
MATR3-231	ENST00000502394	IQCD	Q96DY2	449 aa		13.16	□□□□□ -0.3
MATR3-231	ENST00000502394	FAM84A	Q96KN4	292 aa		13.16	□□□□□ -0.3
MATR3-231	ENST00000502394	SNX27	Q96L92	541 aa		13.16	□□□□□ -0.3
MATR3-231	ENST00000502394	WNT8A	Q9H1J5	351 aa		13.16	□□□□□ -0.3
MATR3-231	ENST00000502394	NXF3	Q9H4D5	531 aa	Known RBP	13.16	□□□□□ -0.3
MATR3-231	ENST00000502394	ASB7	Q9H672	318 aa		13.16	□□□□□ -0.3
MATR3-231	ENST00000502394	IPP	Q9Y573	584 aa		13.16	□□□□□ -0.3
MATR3-231	ENST00000502394	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	13.16	□□□□□ -0.3	2e-6	■□□□□ 11.1
MATR3-231	ENST00000502394		A0A1W2PQJ5	194 aa		13.15	□□□□□ -0.3
MATR3-231	ENST00000502394	LACTBL1	A8MY62	500 aa		13.15	□□□□□ -0.3
MATR3-231	ENST00000502394	RNF225	M0QZC1	329 aa	Predicted RBP	13.15	□□□□□ -0.3
MATR3-231	ENST00000502394	ZNF623	O75123	536 aa		13.15	□□□□□ -0.3
MATR3-231	ENST00000502394	CXCL10	P02778	98 aa		13.15	□□□□□ -0.3
MATR3-231	ENST00000502394	SLC9A1	P19634	815 aa		13.15	□□□□□ -0.3
MATR3-231	ENST00000502394	FXR1	P51114	621 aa	Known RBP eCLIP	13.15	□□□□□ -0.3
MATR3-231	ENST00000502394	AP3M2	P53677	418 aa		13.15	□□□□□ -0.3
MATR3-231	ENST00000502394	OSTN	P61366	133 aa		13.15	□□□□□ -0.3
MATR3-231	ENST00000502394	NFX1	Q12986	1120 aa	Known RBP	13.15	□□□□□ -0.3
MATR3-231	ENST00000502394	MMRN1	Q13201	1228 aa		13.15	□□□□□ -0.3
MATR3-231	ENST00000502394	TDRD10	Q5VZ19	366 aa	Known RBP	13.15	□□□□□ -0.3
MATR3-231	ENST00000502394	LMBRD2	Q68DH5	695 aa	Predicted RBP	13.15	□□□□□ -0.3
MATR3-231	ENST00000502394	CCDC186	Q7Z3E2	898 aa		13.15	□□□□□ -0.3
MATR3-231	ENST00000502394	CD302	Q8IX05	232 aa		13.15	□□□□□ -0.3
MATR3-231	ENST00000502394	DRC7	Q8IY82	874 aa		13.15	□□□□□ -0.3
MATR3-231	ENST00000502394	TC2N	Q8N9U0	490 aa		13.15	□□□□□ -0.3
MATR3-231	ENST00000502394	EHBP1	Q8NDI1	1231 aa		13.15	□□□□□ -0.3
MATR3-231	ENST00000502394	OR5B17	Q8NGF7	314 aa		13.15	□□□□□ -0.3
MATR3-231	ENST00000502394	LINC01599	Q8WXQ3	324 aa		13.15	□□□□□ -0.3
MATR3-231	ENST00000502394	SEMA4D	Q92854	862 aa		13.15	□□□□□ -0.3
MATR3-231	ENST00000502394	ACAP3	Q96P50	834 aa		13.15	□□□□□ -0.3
MATR3-231	ENST00000502394	FNBP1	Q96RU3	617 aa		13.15	□□□□□ -0.3
MATR3-231	ENST00000502394	CRACR2A	Q9BSW2	395 aa		13.15	□□□□□ -0.3
MATR3-231	ENST00000502394	NUP58	Q9BVL2	599 aa		13.15	□□□□□ -0.3
MATR3-231	ENST00000502394	CCDC94	Q9BW85	323 aa	Predicted RBP	13.15	□□□□□ -0.3
MATR3-231	ENST00000502394	LSM14B	Q9BX40	385 aa	Known RBP	13.15	□□□□□ -0.3
MATR3-231	ENST00000502394	EDEM3	Q9BZQ6	932 aa		13.15	□□□□□ -0.3
MATR3-231	ENST00000502394	PLEKHA5	Q9HAU0	1116 aa		13.15	□□□□□ -0.3
MATR3-231	ENST00000502394	FAM105A	Q9NUU6	356 aa		13.15	□□□□□ -0.3
MATR3-231	ENST00000502394	SNTG2	Q9NY99	539 aa		13.15	□□□□□ -0.3
MATR3-231	ENST00000502394	GCNT4	Q9P109	453 aa		13.15	□□□□□ -0.3
MATR3-231	ENST00000502394	FBXL5	Q9UKA1	691 aa		13.15	□□□□□ -0.3
MATR3-231	ENST00000502394	MFAP3L	O75121	409 aa		13.14	□□□□□ -0.31
MATR3-231	ENST00000502394	LRRN2	O75325	713 aa		13.14	□□□□□ -0.31
MATR3-231	ENST00000502394	RECQL4	O94761	1208 aa		13.14	□□□□□ -0.31
MATR3-231	ENST00000502394	PARN	O95453	639 aa	Known RBP	13.14	□□□□□ -0.31
MATR3-231	ENST00000502394	VNN1	O95497	513 aa		13.14	□□□□□ -0.31
MATR3-231	ENST00000502394	ATF7	P17544	494 aa	Predicted RBP	13.14	□□□□□ -0.31
MATR3-231	ENST00000502394	EN2	P19622	333 aa	Predicted RBP	13.14	□□□□□ -0.31
MATR3-231	ENST00000502394	GSDMD	P57764	484 aa		13.14	□□□□□ -0.31
MATR3-231	ENST00000502394	APBA1	Q02410	837 aa		13.14	□□□□□ -0.31
MATR3-231	ENST00000502394	ZBTB6	Q15916	424 aa		13.14	□□□□□ -0.31
MATR3-231	ENST00000502394	PLEKHG4	Q58EX7	1191 aa		13.14	□□□□□ -0.31
MATR3-231	ENST00000502394	KLHDC7A	Q5VTJ3	777 aa		13.14	□□□□□ -0.31
MATR3-231	ENST00000502394	TWF2	Q6IBS0	349 aa	Known RBP	13.14	□□□□□ -0.31
MATR3-231	ENST00000502394	TRIM65	Q6PJ69	517 aa		13.14	□□□□□ -0.31
MATR3-231	ENST00000502394	RTN4RL1	Q86UN2	441 aa	Predicted RBP	13.14	□□□□□ -0.31
MATR3-231	ENST00000502394	NT5DC4	Q86YG4	428 aa		13.14	□□□□□ -0.31
MATR3-231	ENST00000502394	CXorf38	Q8TB03	319 aa		13.14	□□□□□ -0.31
MATR3-231	ENST00000502394	TAS1R2	Q8TE23	839 aa		13.14	□□□□□ -0.31
MATR3-231	ENST00000502394	BAP1	Q92560	729 aa		13.14	□□□□□ -0.31
MATR3-231	ENST00000502394	VWCE	Q96DN2	955 aa		13.14	□□□□□ -0.31
MATR3-231	ENST00000502394	INTS2	Q9H0H0	1204 aa	Known RBP	13.14	□□□□□ -0.31
MATR3-231	ENST00000502394	CXCL16	Q9H2A7	254 aa		13.14	□□□□□ -0.31
MATR3-231	ENST00000502394	HIPK3	Q9H422	1215 aa		13.14	□□□□□ -0.31
MATR3-231	ENST00000502394	CNTN3	Q9P232	1028 aa		13.14	□□□□□ -0.31
MATR3-231	ENST00000502394	CAPN11	Q9UMQ6	739 aa		13.14	□□□□□ -0.31
MATR3-231	ENST00000502394	ATP11B	Q9Y2G3	1177 aa		13.14	□□□□□ -0.31
MATR3-231	ENST00000502394	DERA	Q9Y315	318 aa		13.14	□□□□□ -0.31
MATR3-231	ENST00000502394	C2CD2	Q9Y426	696 aa		13.14	□□□□□ -0.31
MATR3-231	ENST00000502394	HES2	Q9Y543	173 aa		13.14	□□□□□ -0.31
MATR3-231	ENST00000502394	PCDHB2	Q9Y5E7	798 aa		13.14	□□□□□ -0.31
MATR3-231	ENST00000502394		A0A0U1RQF3	1178 aa		13.13	□□□□□ -0.31
MATR3-231	ENST00000502394	GOLGA6L6	A8MZA4	724 aa		13.13	□□□□□ -0.31
MATR3-231	ENST00000502394		C9IYK1	514 aa		13.13	□□□□□ -0.31
MATR3-231	ENST00000502394	NFIC	P08651	508 aa		13.13	□□□□□ -0.31
MATR3-231	ENST00000502394	CLTB	P09497	229 aa		13.13	□□□□□ -0.31
MATR3-231	ENST00000502394	ACTN1	P12814	892 aa		13.13	□□□□□ -0.31
MATR3-231	ENST00000502394	ZSCAN20	P17040	1043 aa	Predicted RBP	13.13	□□□□□ -0.31
MATR3-231	ENST00000502394	TNNI1	P19237	187 aa		13.13	□□□□□ -0.31
MATR3-231	ENST00000502394	FECH	P22830	423 aa		13.13	□□□□□ -0.31
MATR3-231	ENST00000502394	CASP14	P31944	242 aa		13.13	□□□□□ -0.31
MATR3-231	ENST00000502394	RAB27A	P51159	221 aa		13.13	□□□□□ -0.31
MATR3-231	ENST00000502394	FAM189B	P81408	668 aa		13.13	□□□□□ -0.31
MATR3-231	ENST00000502394	TCTN1	Q2MV58	587 aa		13.13	□□□□□ -0.31
MATR3-231	ENST00000502394	SCARA3	Q6AZY7	606 aa		13.13	□□□□□ -0.31
MATR3-231	ENST00000502394	JADE1	Q6IE81	842 aa		13.13	□□□□□ -0.31
MATR3-231	ENST00000502394	ZNF598	Q86UK7	904 aa	Known RBP	13.13	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 21 ms