RNA–Protein interactions for RNA: ENST00000496514.5

PDE6B-212, Transcript of phosphodiesterase 6B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDE6B, Length 3,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-212ENST00000496514 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.18□□□□□ -0.3
PDE6B-212ENST00000496514 GSTTP1A0A1W2PQM5 241 aa13.18□□□□□ -0.3
PDE6B-212ENST00000496514 GOLGA8KD6RF30 607 aa13.18□□□□□ -0.3
PDE6B-212ENST00000496514 PI4K2BG5E9Z4 385 aa13.18□□□□□ -0.3
PDE6B-212ENST00000496514 MAPK4P31152 587 aa13.18□□□□□ -0.3
PDE6B-212ENST00000496514 ZNF844Q08AG5 666 aa13.18□□□□□ -0.3
PDE6B-212ENST00000496514 IFFO1Q0D2I5 559 aa13.18□□□□□ -0.3
PDE6B-212ENST00000496514 KRT71Q3SY84 523 aa13.18□□□□□ -0.3
PDE6B-212ENST00000496514 ICE2Q659A1 982 aa13.18□□□□□ -0.3
PDE6B-212ENST00000496514 CCDC137Q6PK04 289 aaKnown RBP13.18□□□□□ -0.3
PDE6B-212ENST00000496514 RHOT2Q8IXI1 618 aa13.18□□□□□ -0.3
PDE6B-212ENST00000496514 TAB3Q8N5C8 712 aaPredicted RBP13.18□□□□□ -0.3
PDE6B-212ENST00000496514 MSL3Q8N5Y2 521 aaKnown RBP13.18□□□□□ -0.3
PDE6B-212ENST00000496514 MCPH1Q8NEM0 835 aa13.18□□□□□ -0.3
PDE6B-212ENST00000496514 PRPF31Q8WWY3 499 aaKnown RBP13.18□□□□□ -0.3
PDE6B-212ENST00000496514 DDX1Q92499 740 aaKnown RBP13.18□□□□□ -0.3
PDE6B-212ENST00000496514 MFSD14AQ96MC6 490 aa13.18□□□□□ -0.3
PDE6B-212ENST00000496514 ZNF408Q9H9D4 720 aa13.18□□□□□ -0.3
PDE6B-212ENST00000496514 PDGFCQ9NRA1 345 aa13.18□□□□□ -0.3
PDE6B-212ENST00000496514 ARHGAP28Q9P2N2 729 aa13.18□□□□□ -0.3
PDE6B-212ENST00000496514 NUB1Q9Y5A7 615 aa13.18□□□□□ -0.3
PDE6B-212ENST00000496514 GRIN2DO15399 1336 aa13.18□□□□□ -0.3
PDE6B-212ENST00000496514 MYO1FO00160 1098 aa13.18□□□□□ -0.3
PDE6B-212ENST00000496514 RARAP10276 462 aa13.18□□□□□ -0.3
PDE6B-212ENST00000496514 TCF4P15884 667 aa13.18□□□□□ -0.3
PDE6B-212ENST00000496514 NR1D1P20393 614 aa13.18□□□□□ -0.3
PDE6B-212ENST00000496514 SCP2P22307 547 aa13.18□□□□□ -0.3
PDE6B-212ENST00000496514 CAPSQ13938 189 aa13.18□□□□□ -0.3
PDE6B-212ENST00000496514 SEL1L2Q5TEA6 688 aa13.18□□□□□ -0.3
PDE6B-212ENST00000496514 ALS2CLQ60I27 953 aa13.18□□□□□ -0.3
PDE6B-212ENST00000496514 DPH6Q7L8W6 267 aa13.18□□□□□ -0.3
PDE6B-212ENST00000496514 UBL4BQ8N7F7 174 aa13.18□□□□□ -0.3
PDE6B-212ENST00000496514 MDM1Q8TC05 714 aa13.18□□□□□ -0.3
PDE6B-212ENST00000496514 WHAMMQ8TF30 809 aa13.18□□□□□ -0.3
PDE6B-212ENST00000496514 PDLIM7Q9NR12 457 aa13.18□□□□□ -0.3
PDE6B-212ENST00000496514 RRP15Q9Y3B9 282 aaKnown RBP13.18□□□□□ -0.3
PDE6B-212ENST00000496514 C19orf81C9J6K1 198 aa13.17□□□□□ -0.3
PDE6B-212ENST00000496514 B4GALT5O43286 388 aa13.17□□□□□ -0.3
PDE6B-212ENST00000496514 GRIN3BO60391 1043 aa13.17□□□□□ -0.3
PDE6B-212ENST00000496514 WEE2P0C1S8 567 aa13.17□□□□□ -0.3
PDE6B-212ENST00000496514 RPL21P46778 160 aaKnown RBP13.17□□□□□ -0.3
PDE6B-212ENST00000496514 GPC3P51654 580 aa13.17□□□□□ -0.3
PDE6B-212ENST00000496514 STAT5BP51692 787 aa13.17□□□□□ -0.3
PDE6B-212ENST00000496514 POU5F1Q01860 360 aaKnown RBP13.17□□□□□ -0.3
PDE6B-212ENST00000496514 WDR44Q5JSH3 913 aa13.17□□□□□ -0.3
PDE6B-212ENST00000496514 MMS22LQ6ZRQ5 1243 aa13.17□□□□□ -0.3
PDE6B-212ENST00000496514 SAMD3Q8N6K7 520 aa13.17□□□□□ -0.3
PDE6B-212ENST00000496514 FMO2Q99518 471 aa13.17□□□□□ -0.3
PDE6B-212ENST00000496514 MTMR12Q9C0I1 747 aa13.17□□□□□ -0.3
PDE6B-212ENST00000496514 ST6GALNAC4Q9H4F1 302 aa13.17□□□□□ -0.3
PDE6B-212ENST00000496514 CHST7Q9NS84 486 aa13.17□□□□□ -0.3
PDE6B-212ENST00000496514 PHIPQ8WWQ0 1821 aa13.17□□□□□ -0.3
PDE6B-212ENST00000496514 GOLGA6L10A0A0M3HER8 536 aa13.17□□□□□ -0.3
PDE6B-212ENST00000496514 CCDC188H7C350 402 aa13.17□□□□□ -0.3
PDE6B-212ENST00000496514 TNFRSF8P28908 595 aa13.17□□□□□ -0.3
PDE6B-212ENST00000496514 HSPA9P38646 679 aaKnown RBP13.17□□□□□ -0.3
PDE6B-212ENST00000496514 MTM1Q13496 603 aa13.17□□□□□ -0.3
PDE6B-212ENST00000496514 MYBPC2Q14324 1141 aa13.17□□□□□ -0.3
PDE6B-212ENST00000496514 CCDC38Q502W7 563 aa13.17□□□□□ -0.3
PDE6B-212ENST00000496514 BRDTQ58F21 947 aaPredicted RBP13.17□□□□□ -0.3
PDE6B-212ENST00000496514 KAZNQ674X7 775 aa13.17□□□□□ -0.3
PDE6B-212ENST00000496514 TMC3Q7Z5M5 1100 aa13.17□□□□□ -0.3
PDE6B-212ENST00000496514 RHPN2Q8IUC4 686 aa13.17□□□□□ -0.3
PDE6B-212ENST00000496514 RNF149Q8NC42 400 aa13.17□□□□□ -0.3
PDE6B-212ENST00000496514 HAUS1Q96CS2 278 aa13.17□□□□□ -0.3
PDE6B-212ENST00000496514 CCDC113Q9H0I3 377 aa13.17□□□□□ -0.3
PDE6B-212ENST00000496514 CARD9Q9H257 536 aa13.17□□□□□ -0.3
PDE6B-212ENST00000496514 ADAMTS5Q9UNA0 930 aa13.17□□□□□ -0.3
PDE6B-212ENST00000496514 THAP12O43422 761 aa13.17□□□□□ -0.3
PDE6B-212ENST00000496514 FARP2O94887 1054 aaPredicted RBP13.17□□□□□ -0.3
PDE6B-212ENST00000496514 PEX5P50542 639 aa13.17□□□□□ -0.3
PDE6B-212ENST00000496514 PTENP60484 403 aa13.17□□□□□ -0.3
PDE6B-212ENST00000496514 ADCY1Q08828 1119 aa13.17□□□□□ -0.3
PDE6B-212ENST00000496514 SPIRE2Q8WWL2 714 aa13.17□□□□□ -0.3
PDE6B-212ENST00000496514 CSADQ9Y600 493 aa13.17□□□□□ -0.3
PDE6B-212ENST00000496514 GOLGA6L10A6NI86 522 aa13.16□□□□□ -0.3
PDE6B-212ENST00000496514 TFAMQ00059 246 aaKnown RBP13.16□□□□□ -0.3
PDE6B-212ENST00000496514 HP1BP3Q5SSJ5 553 aaPredicted RBP13.16□□□□□ -0.3
PDE6B-212ENST00000496514 TMEM192Q8IY95 271 aa13.16□□□□□ -0.3
PDE6B-212ENST00000496514 RNF25Q96BH1 459 aaPredicted RBP13.16□□□□□ -0.3
PDE6B-212ENST00000496514 CALR3Q96L12 384 aaKnown RBP13.16□□□□□ -0.3
PDE6B-212ENST00000496514 SPATC1LQ9H0A9 340 aa13.16□□□□□ -0.3
PDE6B-212ENST00000496514 SEMA4AQ9H3S1 761 aa13.16□□□□□ -0.3
PDE6B-212ENST00000496514 MAP3K20Q9NYL2 800 aaKnown RBP13.16□□□□□ -0.3
PDE6B-212ENST00000496514 R3HDM2Q9Y2K5 976 aaKnown RBP13.16□□□□□ -0.3
PDE6B-212ENST00000496514 MYO1CO00159 1063 aa13.16□□□□□ -0.3
PDE6B-212ENST00000496514 PIK3R2O00459 728 aa13.16□□□□□ -0.3
PDE6B-212ENST00000496514 P4HA2O15460 535 aa13.16□□□□□ -0.3
PDE6B-212ENST00000496514 EXTL3O43909 919 aa13.16□□□□□ -0.3
PDE6B-212ENST00000496514 MYZAPP0CAP1 466 aa13.16□□□□□ -0.3
PDE6B-212ENST00000496514 ANXA13P27216 316 aa13.16□□□□□ -0.3
PDE6B-212ENST00000496514 RAP1GAPP47736 663 aa13.16□□□□□ -0.3
PDE6B-212ENST00000496514 CLCN3P51790 818 aa13.16□□□□□ -0.3
PDE6B-212ENST00000496514 ACAD10Q6JQN1 1059 aa13.16□□□□□ -0.3
PDE6B-212ENST00000496514 ANKS1BQ7Z6G8 1248 aa13.16□□□□□ -0.3
PDE6B-212ENST00000496514 PSPC1Q8WXF1 523 aaKnown RBP13.16□□□□□ -0.3
PDE6B-212ENST00000496514 ATP6V1G3Q96LB4 118 aa13.16□□□□□ -0.3
PDE6B-212ENST00000496514 CCDC114Q96M63 670 aa13.16□□□□□ -0.3
PDE6B-212ENST00000496514 FBXL18Q96ME1 805 aa13.16□□□□□ -0.3
PDE6B-212ENST00000496514 ERP44Q9BS26 406 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms