RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 ZNF263O14978 683 aa10.76□□□□□ -0.69
SMARCAL1-213ENST00000496037 KHNYNO15037 678 aaKnown RBP10.76□□□□□ -0.69
SMARCAL1-213ENST00000496037 RHOBTB1O94844 696 aa10.76□□□□□ -0.69
SMARCAL1-213ENST00000496037 RHOP08100 348 aa10.76□□□□□ -0.69
SMARCAL1-213ENST00000496037 CEBPBP17676 345 aa10.76□□□□□ -0.69
SMARCAL1-213ENST00000496037 FCARP24071 287 aa10.76□□□□□ -0.69
SMARCAL1-213ENST00000496037 DNM2P50570 870 aa10.76□□□□□ -0.69
SMARCAL1-213ENST00000496037 KPNA1P52294 538 aaPredicted RBP10.76□□□□□ -0.69
SMARCAL1-213ENST00000496037 SIM1P81133 766 aaPredicted RBP10.76□□□□□ -0.69
SMARCAL1-213ENST00000496037 SCAPQ12770 1279 aa10.76□□□□□ -0.69
SMARCAL1-213ENST00000496037 TRDNQ13061 729 aa10.76□□□□□ -0.69
SMARCAL1-213ENST00000496037 SART3Q15020 963 aaKnown RBP10.76□□□□□ -0.69
SMARCAL1-213ENST00000496037 PSMD5Q16401 504 aa10.76□□□□□ -0.69
SMARCAL1-213ENST00000496037 PLK5Q496M5 336 aa10.76□□□□□ -0.69
SMARCAL1-213ENST00000496037 AXDND1Q5T1B0 1012 aaPredicted RBP10.76□□□□□ -0.69
SMARCAL1-213ENST00000496037 ZNF410Q86VK4 478 aa10.76□□□□□ -0.69
SMARCAL1-213ENST00000496037 CTCFLQ8NI51 663 aaPredicted RBP10.76□□□□□ -0.69
SMARCAL1-213ENST00000496037 CCDC86Q9H6F5 360 aaKnown RBP10.76□□□□□ -0.69
SMARCAL1-213ENST00000496037 NRBP2Q9NSY0 501 aa10.76□□□□□ -0.69
SMARCAL1-213ENST00000496037 AGPAT5Q9NUQ2 364 aa10.76□□□□□ -0.69
SMARCAL1-213ENST00000496037 C2orf42Q9NWW7 574 aa10.76□□□□□ -0.69
SMARCAL1-213ENST00000496037 ADAM28Q9UKQ2 775 aa10.76□□□□□ -0.69
SMARCAL1-213ENST00000496037 SAMM50Q9Y512 469 aa10.76□□□□□ -0.69
SMARCAL1-213ENST00000496037 SF3B1O75533 1304 aaKnown RBP eCLIP10.76□□□□□ -0.69
SMARCAL1-213ENST00000496037 COL4A2P08572 1712 aa10.75□□□□□ -0.69
SMARCAL1-213ENST00000496037 SDK1Q7Z5N4 2213 aa10.75□□□□□ -0.69
SMARCAL1-213ENST00000496037 MEIS1O00470 390 aa10.75□□□□□ -0.69
SMARCAL1-213ENST00000496037 PRB1P04280 392 aa10.75□□□□□ -0.69
SMARCAL1-213ENST00000496037 ITGA4P13612 1032 aa10.75□□□□□ -0.69
SMARCAL1-213ENST00000496037 PLA2G2AP14555 144 aa10.75□□□□□ -0.69
SMARCAL1-213ENST00000496037 MLH1P40692 756 aa10.75□□□□□ -0.69
SMARCAL1-213ENST00000496037 MLLT6P55198 1093 aaPredicted RBP10.75□□□□□ -0.69
SMARCAL1-213ENST00000496037 DSC1Q08554 894 aa10.75□□□□□ -0.69
SMARCAL1-213ENST00000496037 KARSQ15046 597 aaKnown RBP10.75□□□□□ -0.69
SMARCAL1-213ENST00000496037 SLC5A9Q2M3M2 681 aa10.75□□□□□ -0.69
SMARCAL1-213ENST00000496037 UVSSAQ2YD98 709 aa10.75□□□□□ -0.69
SMARCAL1-213ENST00000496037 FAM78AQ5JUQ0 283 aa10.75□□□□□ -0.69
SMARCAL1-213ENST00000496037 RTP2Q5QGT7 225 aa10.75□□□□□ -0.69
SMARCAL1-213ENST00000496037 ZNF746Q6NUN9 644 aaPredicted RBP10.75□□□□□ -0.69
SMARCAL1-213ENST00000496037 CYB5R4Q7L1T6 521 aa10.75□□□□□ -0.69
SMARCAL1-213ENST00000496037 MRPL10Q7Z7H8 261 aaKnown RBP10.75□□□□□ -0.69
SMARCAL1-213ENST00000496037 CNNM3Q8NE01 707 aa10.75□□□□□ -0.69
SMARCAL1-213ENST00000496037 PGBD1Q96JS3 809 aa10.75□□□□□ -0.69
SMARCAL1-213ENST00000496037 C8orf33Q9H7E9 229 aaPredicted RBP10.75□□□□□ -0.69
SMARCAL1-213ENST00000496037 SLC8A2Q9UPR5 921 aa10.75□□□□□ -0.69
SMARCAL1-213ENST00000496037 PCDHB15Q9Y5E8 787 aa10.75□□□□□ -0.69
SMARCAL1-213ENST00000496037 PCDHA10Q9Y5I2 948 aa10.75□□□□□ -0.69
SMARCAL1-213ENST00000496037 TICRRQ7Z2Z1 1910 aa10.74□□□□□ -0.69
SMARCAL1-213ENST00000496037 DOCK6Q96HP0 2047 aa10.74□□□□□ -0.69
SMARCAL1-213ENST00000496037 SPAARA0A1B0GVQ0 90 aa10.74□□□□□ -0.69
SMARCAL1-213ENST00000496037 BCLAF3A2AJT9 711 aaKnown RBP10.74□□□□□ -0.69
SMARCAL1-213ENST00000496037 ARL5CA6NH57 179 aa10.74□□□□□ -0.69
SMARCAL1-213ENST00000496037 SLC38A8A6NNN8 435 aa10.74□□□□□ -0.69
SMARCAL1-213ENST00000496037 IPO5O00410 1097 aaKnown RBP10.74□□□□□ -0.69
SMARCAL1-213ENST00000496037 ZNF862O60290 1169 aa10.74□□□□□ -0.69
SMARCAL1-213ENST00000496037 TADA2AO75478 443 aa10.74□□□□□ -0.69
SMARCAL1-213ENST00000496037 CAPNS1P04632 268 aa10.74□□□□□ -0.69
SMARCAL1-213ENST00000496037 HOXC13P31276 330 aa10.74□□□□□ -0.69
SMARCAL1-213ENST00000496037 SCNN1GP51170 649 aa10.74□□□□□ -0.69
SMARCAL1-213ENST00000496037 PRKCEQ02156 737 aa10.74□□□□□ -0.69
SMARCAL1-213ENST00000496037 DRP2Q13474 957 aa10.74□□□□□ -0.69
SMARCAL1-213ENST00000496037 LARP1BQ659C4 914 aaKnown RBP10.74□□□□□ -0.69
SMARCAL1-213ENST00000496037 PDXDC1Q6P996 788 aa10.74□□□□□ -0.69
SMARCAL1-213ENST00000496037 VITQ6UXI7 678 aa10.74□□□□□ -0.69
SMARCAL1-213ENST00000496037 DNAJC14Q6Y2X3 702 aaPredicted RBP10.74□□□□□ -0.69
SMARCAL1-213ENST00000496037 RTL10Q7L3V2 364 aa10.74□□□□□ -0.69
SMARCAL1-213ENST00000496037 NIPA1Q7RTP0 329 aa10.74□□□□□ -0.69
SMARCAL1-213ENST00000496037 ZNF605Q86T29 641 aa10.74□□□□□ -0.69
SMARCAL1-213ENST00000496037 PLA2G4DQ86XP0 818 aa10.74□□□□□ -0.69
SMARCAL1-213ENST00000496037 RHPN2Q8IUC4 686 aa10.74□□□□□ -0.69
SMARCAL1-213ENST00000496037 YAF2Q8IY57 180 aa10.74□□□□□ -0.69
SMARCAL1-213ENST00000496037 SYNPOQ8N3V7 929 aa10.74□□□□□ -0.69
SMARCAL1-213ENST00000496037 NLRP4Q96MN2 994 aa10.74□□□□□ -0.69
SMARCAL1-213ENST00000496037 ASB16Q96NS5 453 aa10.74□□□□□ -0.69
SMARCAL1-213ENST00000496037 UBL7Q96S82 380 aaPredicted RBP10.74□□□□□ -0.69
SMARCAL1-213ENST00000496037 GAD1Q99259 594 aa10.74□□□□□ -0.69
SMARCAL1-213ENST00000496037 CLSTN3Q9BQT9 956 aa10.74□□□□□ -0.69
SMARCAL1-213ENST00000496037 LZTS2Q9BRK4 669 aa10.74□□□□□ -0.69
SMARCAL1-213ENST00000496037 ZNF577Q9BSK1 485 aa10.74□□□□□ -0.69
SMARCAL1-213ENST00000496037 TTPALQ9BTX7 342 aa10.74□□□□□ -0.69
SMARCAL1-213ENST00000496037 ANO3Q9BYT9 981 aa10.74□□□□□ -0.69
SMARCAL1-213ENST00000496037 AVENQ9NQS1 362 aaPredicted RBP10.74□□□□□ -0.69
SMARCAL1-213ENST00000496037 PCDHB3Q9Y5E6 796 aa10.74□□□□□ -0.69
SMARCAL1-213ENST00000496037 SPAG17Q6Q759 2223 aa10.74□□□□□ -0.69
SMARCAL1-213ENST00000496037 WDR81Q562E7 1941 aa10.74□□□□□ -0.69
SMARCAL1-213ENST00000496037 FAM221BA6H8Z2 402 aa10.73□□□□□ -0.69
SMARCAL1-213ENST00000496037 ANKRD62A6NC57 917 aa10.73□□□□□ -0.69
SMARCAL1-213ENST00000496037 CDX4O14627 284 aaPredicted RBP10.73□□□□□ -0.69
SMARCAL1-213ENST00000496037 DHX15O43143 795 aaKnown RBP10.73□□□□□ -0.69
SMARCAL1-213ENST00000496037 ACTN4O43707 911 aaKnown RBP10.73□□□□□ -0.69
SMARCAL1-213ENST00000496037 EXTL3O43909 919 aa10.73□□□□□ -0.69
SMARCAL1-213ENST00000496037 FOSP01100 380 aaPredicted RBP10.73□□□□□ -0.69
SMARCAL1-213ENST00000496037 SMARCA1P28370 1054 aa10.73□□□□□ -0.69
SMARCAL1-213ENST00000496037 HEATR3Q7Z4Q2 680 aa10.73□□□□□ -0.69
SMARCAL1-213ENST00000496037 CEP57Q86XR8 500 aa10.73□□□□□ -0.69
SMARCAL1-213ENST00000496037 CHCHD4Q8N4Q1 142 aa10.73□□□□□ -0.69
SMARCAL1-213ENST00000496037 PIK3R5Q8WYR1 880 aa10.73□□□□□ -0.69
SMARCAL1-213ENST00000496037 SMARCD2Q92925 531 aa10.73□□□□□ -0.69
SMARCAL1-213ENST00000496037 DUSP15Q9H1R2 295 aaPredicted RBP10.73□□□□□ -0.69
SMARCAL1-213ENST00000496037 SENP2Q9HC62 589 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms