RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 NFICP08651 508 aa21.1■□□□□ 0.97
ATG3-208ENST00000495756 TNNI1P19237 187 aa21.1■□□□□ 0.97
ATG3-208ENST00000495756 TMEM132DQ14C87 1099 aa21.1■□□□□ 0.97
ATG3-208ENST00000495756 GLRA4Q5JXX5 417 aa21.1■□□□□ 0.97
ATG3-208ENST00000495756 C9orf50Q5SZB4 431 aa21.1■□□□□ 0.97
ATG3-208ENST00000495756 TMCO2Q7Z6W1 182 aaPredicted RBP21.1■□□□□ 0.97
ATG3-208ENST00000495756 WDR49Q8IV35 697 aa21.1■□□□□ 0.97
ATG3-208ENST00000495756 EFCAB13Q8IY85 973 aa21.1■□□□□ 0.97
ATG3-208ENST00000495756 ABI1Q8IZP0 508 aa21.1■□□□□ 0.97
ATG3-208ENST00000495756 KIF12Q96FN5 646 aa21.1■□□□□ 0.97
ATG3-208ENST00000495756 TSPAN18Q96SJ8 248 aa21.1■□□□□ 0.97
ATG3-208ENST00000495756 MIOSQ9NXC5 875 aa21.1■□□□□ 0.97
ATG3-208ENST00000495756 PLAGL2Q9UPG8 496 aa21.1■□□□□ 0.97
ATG3-208ENST00000495756 INPP5FQ9Y2H2 1132 aa21.1■□□□□ 0.97
ATG3-208ENST00000495756 SLC4A7Q9Y6M7 1214 aa21.1■□□□□ 0.97
ATG3-208ENST00000495756 PTPRSQ13332 1948 aa21.1■□□□□ 0.97
ATG3-208ENST00000495756 PDCD11Q14690 1871 aaKnown RBP21.1■□□□□ 0.97
ATG3-208ENST00000495756 LRRC10BA6NIK2 292 aa21.09■□□□□ 0.97
ATG3-208ENST00000495756 DGKIO75912 1065 aa21.09■□□□□ 0.97
ATG3-208ENST00000495756 PRKCSHP14314 528 aaPredicted RBP21.09■□□□□ 0.97
ATG3-208ENST00000495756 GATMP50440 423 aa21.09■□□□□ 0.97
ATG3-208ENST00000495756 SCNN1GP51170 649 aa21.09■□□□□ 0.97
ATG3-208ENST00000495756 MAN2A1Q16706 1144 aa21.09■□□□□ 0.97
ATG3-208ENST00000495756 NOMO2Q5JPE7 1267 aa21.09■□□□□ 0.97
ATG3-208ENST00000495756 LMBRD2Q68DH5 695 aaPredicted RBP21.09■□□□□ 0.97
ATG3-208ENST00000495756 APTXQ7Z2E3 356 aaKnown RBP21.09■□□□□ 0.97
ATG3-208ENST00000495756 NT5DC4Q86YG4 428 aa21.09■□□□□ 0.97
ATG3-208ENST00000495756 FAM84AQ96KN4 292 aa21.09■□□□□ 0.97
ATG3-208ENST00000495756 UBE2OQ9C0C9 1292 aaKnown RBP21.09■□□□□ 0.97
ATG3-208ENST00000495756 INTS13Q9NVM9 706 aa21.09■□□□□ 0.97
ATG3-208ENST00000495756 TAB2Q9NYJ8 693 aa21.09■□□□□ 0.97
ATG3-208ENST00000495756 POMCP01189 267 aa21.08■□□□□ 0.97
ATG3-208ENST00000495756 TFAMQ00059 246 aaKnown RBP21.08■□□□□ 0.97
ATG3-208ENST00000495756 PPP3CAQ08209 521 aa21.08■□□□□ 0.97
ATG3-208ENST00000495756 SHHQ15465 462 aa21.08■□□□□ 0.97
ATG3-208ENST00000495756 ZBTB6Q15916 424 aa21.08■□□□□ 0.97
ATG3-208ENST00000495756 DUOXA2Q1HG44 320 aa21.08■□□□□ 0.97
ATG3-208ENST00000495756 FAM117BQ6P1L5 589 aa21.08■□□□□ 0.97
ATG3-208ENST00000495756 OR5B17Q8NGF7 314 aa21.08■□□□□ 0.97
ATG3-208ENST00000495756 URGCPQ8TCY9 931 aa21.08■□□□□ 0.97
ATG3-208ENST00000495756 RSPH1Q8WYR4 309 aa21.08■□□□□ 0.97
ATG3-208ENST00000495756 ZNF516Q92618 1163 aa21.08■□□□□ 0.97
ATG3-208ENST00000495756 CASD1Q96PB1 797 aa21.08■□□□□ 0.97
ATG3-208ENST00000495756 PPP1R10Q96QC0 940 aaKnown RBP21.08■□□□□ 0.97
ATG3-208ENST00000495756 SLC9A7Q96T83 725 aa21.08■□□□□ 0.97
ATG3-208ENST00000495756 TMEM117Q9H0C3 514 aa21.08■□□□□ 0.97
ATG3-208ENST00000495756 STX10O60499 249 aa21.07■□□□□ 0.96
ATG3-208ENST00000495756 THP07101 528 aa21.07■□□□□ 0.96
ATG3-208ENST00000495756 GTF2H1P32780 548 aa21.07■□□□□ 0.96
ATG3-208ENST00000495756 GCLMP48507 274 aa21.07■□□□□ 0.96
ATG3-208ENST00000495756 AP3M2P53677 418 aa21.07■□□□□ 0.96
ATG3-208ENST00000495756 KCNH2Q12809 1159 aa21.07■□□□□ 0.96
ATG3-208ENST00000495756 VWA3BQ502W6 1294 aa21.07■□□□□ 0.96
ATG3-208ENST00000495756 MIIPQ5JXC2 388 aa21.07■□□□□ 0.96
ATG3-208ENST00000495756 PHOSPHO2Q8TCD6 241 aa21.07■□□□□ 0.96
ATG3-208ENST00000495756 CACTINQ8WUQ7 758 aaKnown RBP21.07■□□□□ 0.96
ATG3-208ENST00000495756 MTMR12Q9C0I1 747 aa21.07■□□□□ 0.96
ATG3-208ENST00000495756 KANSL3Q9P2N6 904 aa21.07■□□□□ 0.96
ATG3-208ENST00000495756 FNDC1Q4ZHG4 1894 aaPredicted RBP21.07■□□□□ 0.96
ATG3-208ENST00000495756 TBKBP1A7MCY6 615 aa21.07■□□□□ 0.96
ATG3-208ENST00000495756 GJB5O95377 273 aa21.07■□□□□ 0.96
ATG3-208ENST00000495756 AFPP02771 609 aaKnown RBP21.07■□□□□ 0.96
ATG3-208ENST00000495756 ATP2A2P16615 1042 aaKnown RBP21.07■□□□□ 0.96
ATG3-208ENST00000495756 COPB1P53618 953 aaKnown RBP21.07■□□□□ 0.96
ATG3-208ENST00000495756 GRIK3Q13003 919 aa21.07■□□□□ 0.96
ATG3-208ENST00000495756 NAB2Q15742 525 aa21.07■□□□□ 0.96
ATG3-208ENST00000495756 C18orf25Q96B23 403 aaPredicted RBP21.07■□□□□ 0.96
ATG3-208ENST00000495756 RNPC3Q96LT9 517 aaKnown RBP21.07■□□□□ 0.96
ATG3-208ENST00000495756 VPS16Q9H269 839 aa21.07■□□□□ 0.96
ATG3-208ENST00000495756 NDST4Q9H3R1 872 aa21.07■□□□□ 0.96
ATG3-208ENST00000495756 MMRN2Q9H8L6 949 aa21.07■□□□□ 0.96
ATG3-208ENST00000495756 RC3H2Q9HBD1 1191 aaKnown RBP21.07■□□□□ 0.96
ATG3-208ENST00000495756 SLC38A7Q9NVC3 462 aa21.07■□□□□ 0.96
ATG3-208ENST00000495756 TBC1D13Q9NVG8 400 aa21.07■□□□□ 0.96
ATG3-208ENST00000495756 UBQLN1Q9UMX0 589 aaKnown RBP21.07■□□□□ 0.96
ATG3-208ENST00000495756 TDRD15B5MCY1 1934 aaKnown RBP21.06■□□□□ 0.96
ATG3-208ENST00000495756 COL4A6Q14031 1691 aa21.06■□□□□ 0.96
ATG3-208ENST00000495756 XPOTO43592 962 aaKnown RBP21.06■□□□□ 0.96
ATG3-208ENST00000495756 SERPINC1P01008 464 aa21.06■□□□□ 0.96
ATG3-208ENST00000495756 TNNC2P02585 160 aa21.06■□□□□ 0.96
ATG3-208ENST00000495756 TPM2P07951 284 aa21.06■□□□□ 0.96
ATG3-208ENST00000495756 TMEM191BP0C7N4 346 aa21.06■□□□□ 0.96
ATG3-208ENST00000495756 FANCCQ00597 558 aa21.06■□□□□ 0.96
ATG3-208ENST00000495756 C15orf39Q6ZRI6 1047 aa21.06■□□□□ 0.96
ATG3-208ENST00000495756 SV2AQ7L0J3 742 aa21.06■□□□□ 0.96
ATG3-208ENST00000495756 HERC6Q8IVU3 1022 aa21.06■□□□□ 0.96
ATG3-208ENST00000495756 ZNF689Q96CS4 500 aaPredicted RBP21.06■□□□□ 0.96
ATG3-208ENST00000495756 ANKRD36BP1Q96IX9 119 aa21.06■□□□□ 0.96
ATG3-208ENST00000495756 TMEM8AQ9HCN3 771 aa21.06■□□□□ 0.96
ATG3-208ENST00000495756 TUBGCP4Q9UGJ1 667 aa21.06■□□□□ 0.96
ATG3-208ENST00000495756 C4BPAP04003 597 aaKnown RBP21.05■□□□□ 0.96
ATG3-208ENST00000495756 CYP3A5P20815 502 aa21.05■□□□□ 0.96
ATG3-208ENST00000495756 FMO5P49326 533 aa21.05■□□□□ 0.96
ATG3-208ENST00000495756 MXI1P50539 228 aa21.05■□□□□ 0.96
ATG3-208ENST00000495756 SOX4Q06945 474 aaPredicted RBP21.05■□□□□ 0.96
ATG3-208ENST00000495756 UVSSAQ2YD98 709 aa21.05■□□□□ 0.96
ATG3-208ENST00000495756 ZACNQ401N2 412 aa21.05■□□□□ 0.96
ATG3-208ENST00000495756 CBWD6Q4V339 395 aa21.05■□□□□ 0.96
ATG3-208ENST00000495756 CBWD3Q5JTY5 395 aa21.05■□□□□ 0.96
ATG3-208ENST00000495756 CBWD5Q5RIA9 395 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms