RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-221ENST00000495755 ZDHHC7Q9NXF8 308 aa7.9□□□□□ -1.14
VPS52-221ENST00000495755 CNTN3Q9P232 1028 aa7.9□□□□□ -1.14
VPS52-221ENST00000495755 LARSQ9P2J5 1176 aaKnown RBP7.9□□□□□ -1.14
VPS52-221ENST00000495755 LIMD1Q9UGP4 676 aa7.9□□□□□ -1.14
VPS52-221ENST00000495755 FBXO2Q9UK22 296 aaPredicted RBP7.9□□□□□ -1.14
VPS52-221ENST00000495755 ODF2LQ9ULJ1 636 aa7.9□□□□□ -1.14
VPS52-221ENST00000495755 MTMR6Q9Y217 621 aa7.9□□□□□ -1.14
VPS52-221ENST00000495755 SRPRBQ9Y5M8 271 aaKnown RBP7.9□□□□□ -1.14
VPS52-221ENST00000495755 MUC6Q6W4X9 2439 aa7.9□□□□□ -1.15
VPS52-221ENST00000495755 SPDYE4A6NLX3 237 aa7.89□□□□□ -1.15
VPS52-221ENST00000495755 K7ELQ4 463 aaPredicted RBP7.89□□□□□ -1.15
VPS52-221ENST00000495755 CLDN3O15551 220 aa7.89□□□□□ -1.15
VPS52-221ENST00000495755 ADAM12O43184 909 aa7.89□□□□□ -1.15
VPS52-221ENST00000495755 N4BP1O75113 896 aaKnown RBP7.89□□□□□ -1.15
VPS52-221ENST00000495755 ZMYND10O75800 440 aa7.89□□□□□ -1.15
VPS52-221ENST00000495755 PIGRP01833 764 aa7.89□□□□□ -1.15
VPS52-221ENST00000495755 MYBP10242 640 aa7.89□□□□□ -1.15
VPS52-221ENST00000495755 MARCKSP29966 332 aaPredicted RBP7.89□□□□□ -1.15
VPS52-221ENST00000495755 RPL9P32969 192 aaKnown RBP7.89□□□□□ -1.15
VPS52-221ENST00000495755 MTMR3Q13615 1198 aa7.89□□□□□ -1.15
VPS52-221ENST00000495755 RAB33AQ14088 237 aa7.89□□□□□ -1.15
VPS52-221ENST00000495755 DHX8Q14562 1220 aaKnown RBP7.89□□□□□ -1.15
VPS52-221ENST00000495755 NOLC1Q14978 699 aaKnown RBP eCLIP7.89□□□□□ -1.15
VPS52-221ENST00000495755 PSMD5Q16401 504 aa7.89□□□□□ -1.15
VPS52-221ENST00000495755 RSPO2Q6UXX9 243 aaPredicted RBP7.89□□□□□ -1.15
VPS52-221ENST00000495755 CCDC149Q6ZUS6 474 aa7.89□□□□□ -1.15
VPS52-221ENST00000495755 CEP57Q86XR8 500 aa7.89□□□□□ -1.15
VPS52-221ENST00000495755 GLYCTKQ8IVS8 523 aa7.89□□□□□ -1.15
VPS52-221ENST00000495755 UBALD2Q8IYN6 164 aa7.89□□□□□ -1.15
VPS52-221ENST00000495755 FBXL6Q8N531 539 aa7.89□□□□□ -1.15
VPS52-221ENST00000495755 MYCT1Q8N699 235 aa7.89□□□□□ -1.15
VPS52-221ENST00000495755 SMG7Q92540 1137 aaKnown RBP7.89□□□□□ -1.15
VPS52-221ENST00000495755 C18orf25Q96B23 403 aaPredicted RBP7.89□□□□□ -1.15
VPS52-221ENST00000495755 ACSF2Q96CM8 615 aaPredicted RBP7.89□□□□□ -1.15
VPS52-221ENST00000495755 FAM122AQ96E09 287 aa7.89□□□□□ -1.15
VPS52-221ENST00000495755 FIZ1Q96SL8 496 aa7.89□□□□□ -1.15
VPS52-221ENST00000495755 PRKD2Q9BZL6 878 aa7.89□□□□□ -1.15
VPS52-221ENST00000495755 KCNH6Q9H252 994 aa7.89□□□□□ -1.15
VPS52-221ENST00000495755 PLEKHA5Q9HAU0 1116 aa7.89□□□□□ -1.15
VPS52-221ENST00000495755 ANKFY1Q9P2R3 1169 aa7.89□□□□□ -1.15
VPS52-221ENST00000495755 MTRRQ9UBK8 725 aa7.89□□□□□ -1.15
VPS52-221ENST00000495755 FBXW11Q9UKB1 542 aa7.89□□□□□ -1.15
VPS52-221ENST00000495755 TBX20Q9UMR3 447 aa7.89□□□□□ -1.15
VPS52-221ENST00000495755 SORCS3Q9UPU3 1222 aa7.89□□□□□ -1.15
VPS52-221ENST00000495755 BACE2Q9Y5Z0 518 aa7.89□□□□□ -1.15
VPS52-221ENST00000495755 MORC2Q9Y6X9 1032 aaPredicted RBP7.89□□□□□ -1.15
VPS52-221ENST00000495755 PLXNA3P51805 1871 aa7.89□□□□□ -1.15
VPS52-221ENST00000495755 VPS13AQ96RL7 3174 aa7.89□□□□□ -1.15
VPS52-221ENST00000495755 DENND4AQ7Z401 1863 aa7.88□□□□□ -1.15
VPS52-221ENST00000495755 CLUHO75153 1309 aa7.88□□□□□ -1.15
VPS52-221ENST00000495755 I3L4J1 428 aa7.88□□□□□ -1.15
VPS52-221ENST00000495755 PODXLO00592 558 aa7.88□□□□□ -1.15
VPS52-221ENST00000495755 TRAPPC3O43617 180 aa7.88□□□□□ -1.15
VPS52-221ENST00000495755 STX6O43752 255 aa7.88□□□□□ -1.15
VPS52-221ENST00000495755 TRAK2O60296 914 aa7.88□□□□□ -1.15
VPS52-221ENST00000495755 FAM189A1O60320 539 aa7.88□□□□□ -1.15
VPS52-221ENST00000495755 TBC1D4O60343 1298 aa7.88□□□□□ -1.15
VPS52-221ENST00000495755 FAM13AO94988 1023 aa7.88□□□□□ -1.15
VPS52-221ENST00000495755 ASGR2P07307 311 aa7.88□□□□□ -1.15
VPS52-221ENST00000495755 ADRB2P07550 413 aa7.88□□□□□ -1.15
VPS52-221ENST00000495755 CLTAP09496 248 aa7.88□□□□□ -1.15
VPS52-221ENST00000495755 HARSP12081 509 aaKnown RBP7.88□□□□□ -1.15
VPS52-221ENST00000495755 TKTP29401 623 aaKnown RBP7.88□□□□□ -1.15
VPS52-221ENST00000495755 BRCC3P46736 316 aa7.88□□□□□ -1.15
VPS52-221ENST00000495755 GTF2BQ00403 316 aa7.88□□□□□ -1.15
VPS52-221ENST00000495755 MRPL58Q14197 206 aaKnown RBP7.88□□□□□ -1.15
VPS52-221ENST00000495755 SLC39A14Q15043 492 aa7.88□□□□□ -1.15
VPS52-221ENST00000495755 ZBTB6Q15916 424 aa7.88□□□□□ -1.15
VPS52-221ENST00000495755 SEZ6Q53EL9 994 aa7.88□□□□□ -1.15
VPS52-221ENST00000495755 SPECC1Q5M775 1068 aa7.88□□□□□ -1.15
VPS52-221ENST00000495755 LARP4BQ92615 738 aaKnown RBP7.88□□□□□ -1.15
VPS52-221ENST00000495755 SNX21Q969T3 373 aa7.88□□□□□ -1.15
VPS52-221ENST00000495755 CLIC6Q96NY7 704 aa7.88□□□□□ -1.15
VPS52-221ENST00000495755 USP28Q96RU2 1077 aa7.88□□□□□ -1.15
VPS52-221ENST00000495755 SMOC2Q9H3U7 446 aa7.88□□□□□ -1.15
VPS52-221ENST00000495755 ST6GALNAC4Q9H4F1 302 aa7.88□□□□□ -1.15
VPS52-221ENST00000495755 ZSCAN16Q9H4T2 348 aaPredicted RBP7.88□□□□□ -1.15
VPS52-221ENST00000495755 PARVGQ9HBI0 331 aa7.88□□□□□ -1.15
VPS52-221ENST00000495755 FOXD4L1Q9NU39 408 aa7.88□□□□□ -1.15
VPS52-221ENST00000495755 EPS15L1Q9UBC2 864 aa7.88□□□□□ -1.15
VPS52-221ENST00000495755 ZNF318Q5VUA4 2279 aa7.88□□□□□ -1.15
VPS52-221ENST00000495755 MYO10Q9HD67 2058 aa7.87□□□□□ -1.15
VPS52-221ENST00000495755 A0A0B4J269 797 aa7.87□□□□□ -1.15
VPS52-221ENST00000495755 TTC26A0AVF1 554 aa7.87□□□□□ -1.15
VPS52-221ENST00000495755 K7ENM7 598 aa7.87□□□□□ -1.15
VPS52-221ENST00000495755 HNRNPDLO14979 420 aaKnown RBP7.87□□□□□ -1.15
VPS52-221ENST00000495755 TBCAO75347 108 aaKnown RBP7.87□□□□□ -1.15
VPS52-221ENST00000495755 KRT18P05783 430 aaKnown RBP7.87□□□□□ -1.15
VPS52-221ENST00000495755 C8AP07357 584 aa7.87□□□□□ -1.15
VPS52-221ENST00000495755 POU2F2P09086 479 aa7.87□□□□□ -1.15
VPS52-221ENST00000495755 HNRNPA1P09651 372 aaKnown RBP eCLIP7.87□□□□□ -1.15
VPS52-221ENST00000495755 CXCL8P10145 99 aa7.87□□□□□ -1.15
VPS52-221ENST00000495755 NMT1P30419 496 aaKnown RBP7.87□□□□□ -1.15
VPS52-221ENST00000495755 HOXA9P31269 272 aa7.87□□□□□ -1.15
VPS52-221ENST00000495755 ABCD1P33897 745 aa7.87□□□□□ -1.15
VPS52-221ENST00000495755 OR1D2P34982 312 aa7.87□□□□□ -1.15
VPS52-221ENST00000495755 TNFSF9P41273 254 aa7.87□□□□□ -1.15
VPS52-221ENST00000495755 NASPP49321 788 aaPredicted RBP7.87□□□□□ -1.15
VPS52-221ENST00000495755 LIG4P49917 911 aa7.87□□□□□ -1.15
VPS52-221ENST00000495755 CEBPZQ03701 1054 aaKnown RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms