RNA–Protein interactions for RNA: ENST00000495509.6

PHF1-211, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-211ENST00000495509 CST3P01034 146 aaPredicted RBP16.96■□□□□ 0.31
PHF1-211ENST00000495509 ATF7P17544 494 aaPredicted RBP16.96■□□□□ 0.31
PHF1-211ENST00000495509 CASP14P31944 242 aa16.96■□□□□ 0.31
PHF1-211ENST00000495509 FXR1P51114 621 aaKnown RBP eCLIP16.96■□□□□ 0.31
PHF1-211ENST00000495509 AFF1P51825 1210 aaKnown RBP16.96■□□□□ 0.31
PHF1-211ENST00000495509 YARSP54577 528 aaKnown RBP16.96■□□□□ 0.31
PHF1-211ENST00000495509 ADKP55263 362 aaKnown RBP16.96■□□□□ 0.31
PHF1-211ENST00000495509 POU5F1Q01860 360 aaKnown RBP16.96■□□□□ 0.31
PHF1-211ENST00000495509 DUOXA2Q1HG44 320 aa16.96■□□□□ 0.31
PHF1-211ENST00000495509 GLRA4Q5JXX5 417 aa16.96■□□□□ 0.31
PHF1-211ENST00000495509 GJB7Q6PEY0 223 aa16.96■□□□□ 0.31
PHF1-211ENST00000495509 MRPL10Q7Z7H8 261 aaKnown RBP16.96■□□□□ 0.31
PHF1-211ENST00000495509 RNF169Q8NCN4 708 aa16.96■□□□□ 0.31
PHF1-211ENST00000495509 ZFP42Q96MM3 310 aa16.96■□□□□ 0.31
PHF1-211ENST00000495509 TRAIPQ9BWF2 469 aa16.96■□□□□ 0.31
PHF1-211ENST00000495509 INTS2Q9H0H0 1204 aaKnown RBP16.96■□□□□ 0.31
PHF1-211ENST00000495509 RGS18Q9NS28 235 aa16.96■□□□□ 0.31
PHF1-211ENST00000495509 COQ4Q9Y3A0 265 aa16.96■□□□□ 0.31
PHF1-211ENST00000495509 P4HA2O15460 535 aa16.95■□□□□ 0.3
PHF1-211ENST00000495509 N4BP1O75113 896 aaKnown RBP16.95■□□□□ 0.3
PHF1-211ENST00000495509 ZNF623O75123 536 aa16.95■□□□□ 0.3
PHF1-211ENST00000495509 ITGA4P13612 1032 aa16.95■□□□□ 0.3
PHF1-211ENST00000495509 TRIM21P19474 475 aaKnown RBP16.95■□□□□ 0.3
PHF1-211ENST00000495509 GUCY2FP51841 1108 aa16.95■□□□□ 0.3
PHF1-211ENST00000495509 LRMPQ12912 555 aa16.95■□□□□ 0.3
PHF1-211ENST00000495509 BIRC3Q13489 604 aa16.95■□□□□ 0.3
PHF1-211ENST00000495509 TRIM65Q6PJ69 517 aa16.95■□□□□ 0.3
PHF1-211ENST00000495509 AGMOQ6ZNB7 445 aa16.95■□□□□ 0.3
PHF1-211ENST00000495509 TRAPPC11Q7Z392 1133 aa16.95■□□□□ 0.3
PHF1-211ENST00000495509 KIF12Q96FN5 646 aa16.95■□□□□ 0.3
PHF1-211ENST00000495509 PI4K2AQ9BTU6 479 aa16.95■□□□□ 0.3
PHF1-211ENST00000495509 TTYH3Q9C0H2 523 aa16.95■□□□□ 0.3
PHF1-211ENST00000495509 PLEKHA5Q9HAU0 1116 aa16.95■□□□□ 0.3
PHF1-211ENST00000495509 IMPACTQ9P2X3 320 aa16.95■□□□□ 0.3
PHF1-211ENST00000495509 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.95■□□□□ 0.38e-10■■■■□ 26.3
PHF1-211ENST00000495509 C9IYK1 514 aa16.94■□□□□ 0.3
PHF1-211ENST00000495509 ENPP3O14638 875 aa16.94■□□□□ 0.3
PHF1-211ENST00000495509 KIAA0355O15063 1070 aa16.94■□□□□ 0.3
PHF1-211ENST00000495509 TIMP1P01033 207 aa16.94■□□□□ 0.3
PHF1-211ENST00000495509 HLA-DRAP01903 254 aa16.94■□□□□ 0.3
PHF1-211ENST00000495509 CXCL10P02778 98 aa16.94■□□□□ 0.3
PHF1-211ENST00000495509 PTMAP06454 111 aaKnown RBP16.94■□□□□ 0.3
PHF1-211ENST00000495509 KLHDC7AQ5VTJ3 777 aa16.94■□□□□ 0.3
PHF1-211ENST00000495509 PPFIBP1Q86W92 1011 aa16.94■□□□□ 0.3
PHF1-211ENST00000495509 ECHDC2Q86YB7 292 aa16.94■□□□□ 0.3
PHF1-211ENST00000495509 FBXL13Q8NEE6 735 aa16.94■□□□□ 0.3
PHF1-211ENST00000495509 NEK11Q8NG66 645 aa16.94■□□□□ 0.3
PHF1-211ENST00000495509 SEPT8Q92599 483 aa16.94■□□□□ 0.3
PHF1-211ENST00000495509 GANQ9H2C0 597 aa16.94■□□□□ 0.3
PHF1-211ENST00000495509 TSPYL2Q9H2G4 693 aaPredicted RBP16.94■□□□□ 0.3
PHF1-211ENST00000495509 RAB20Q9NX57 234 aa16.94■□□□□ 0.3
PHF1-211ENST00000495509 AJAP1Q9UKB5 411 aaPredicted RBP16.94■□□□□ 0.3
PHF1-211ENST00000495509 SMIM28A0A1B0GU29 152 aa16.94■□□□□ 0.3
PHF1-211ENST00000495509 TMEM191BP0C7N4 346 aa16.94■□□□□ 0.3
PHF1-211ENST00000495509 CETN1Q12798 172 aa16.94■□□□□ 0.3
PHF1-211ENST00000495509 TMEM132DQ14C87 1099 aa16.94■□□□□ 0.3
PHF1-211ENST00000495509 ZBTB6Q15916 424 aa16.94■□□□□ 0.3
PHF1-211ENST00000495509 XKR4Q5GH76 650 aa16.94■□□□□ 0.3
PHF1-211ENST00000495509 PHLDB3Q6NSJ2 640 aa16.94■□□□□ 0.3
PHF1-211ENST00000495509 SLC24A5Q71RS6 500 aa16.94■□□□□ 0.3
PHF1-211ENST00000495509 C18orf25Q96B23 403 aaPredicted RBP16.94■□□□□ 0.3
PHF1-211ENST00000495509 TRIM44Q96DX7 344 aaPredicted RBP16.94■□□□□ 0.3
PHF1-211ENST00000495509 ZNF830Q96NB3 372 aaPredicted RBP16.94■□□□□ 0.3
PHF1-211ENST00000495509 NLRC4Q9NPP4 1024 aa16.94■□□□□ 0.3
PHF1-211ENST00000495509 MIOSQ9NXC5 875 aa16.94■□□□□ 0.3
PHF1-211ENST00000495509 CNTN3Q9P232 1028 aa16.94■□□□□ 0.3
PHF1-211ENST00000495509 PLAGL2Q9UPG8 496 aa16.94■□□□□ 0.3
PHF1-211ENST00000495509 RALGAPA2Q2PPJ7 1873 aa16.93■□□□□ 0.3
PHF1-211ENST00000495509 PHACTR2O75167 634 aa16.93■□□□□ 0.3
PHF1-211ENST00000495509 CSF2RAP15509 400 aa16.93■□□□□ 0.3
PHF1-211ENST00000495509 RAG1P15918 1043 aa16.93■□□□□ 0.3
PHF1-211ENST00000495509 MLH1P40692 756 aa16.93■□□□□ 0.3
PHF1-211ENST00000495509 RAB27AP51159 221 aa16.93■□□□□ 0.3
PHF1-211ENST00000495509 POLR2FP61218 127 aaKnown RBP16.93■□□□□ 0.3
PHF1-211ENST00000495509 FAM189BP81408 668 aa16.93■□□□□ 0.3
PHF1-211ENST00000495509 ZNF598Q86UK7 904 aaKnown RBP16.93■□□□□ 0.3
PHF1-211ENST00000495509 CD302Q8IX05 232 aa16.93■□□□□ 0.3
PHF1-211ENST00000495509 C1orf127Q8N9H9 656 aa16.93■□□□□ 0.3
PHF1-211ENST00000495509 TC2NQ8N9U0 490 aa16.93■□□□□ 0.3
PHF1-211ENST00000495509 GSTCDQ8NEC7 633 aa16.93■□□□□ 0.3
PHF1-211ENST00000495509 TATDN2Q93075 761 aa16.93■□□□□ 0.3
PHF1-211ENST00000495509 ANKRD36BP1Q96IX9 119 aa16.93■□□□□ 0.3
PHF1-211ENST00000495509 GAD1Q99259 594 aa16.93■□□□□ 0.3
PHF1-211ENST00000495509 FTHL17Q9BXU8 183 aa16.93■□□□□ 0.3
PHF1-211ENST00000495509 PLCB1Q9NQ66 1216 aa16.93■□□□□ 0.3
PHF1-211ENST00000495509 SIX4Q9UIU6 781 aa16.93■□□□□ 0.3
PHF1-211ENST00000495509 CAPN11Q9UMQ6 739 aa16.93■□□□□ 0.3
PHF1-211ENST00000495509 PDCD11Q14690 1871 aaKnown RBP16.93■□□□□ 0.3
PHF1-211ENST00000495509 PTGESO14684 152 aa16.92■□□□□ 0.3
PHF1-211ENST00000495509 PARNO95453 639 aaKnown RBP16.92■□□□□ 0.3
PHF1-211ENST00000495509 TNNC2P02585 160 aa16.92■□□□□ 0.3
PHF1-211ENST00000495509 PIK3CAP42336 1068 aa16.92■□□□□ 0.3
PHF1-211ENST00000495509 AP3M2P53677 418 aa16.92■□□□□ 0.3
PHF1-211ENST00000495509 NCOA4Q13772 614 aa16.92■□□□□ 0.3
PHF1-211ENST00000495509 SPOPLQ6IQ16 392 aa16.92■□□□□ 0.3
PHF1-211ENST00000495509 ARHGEF19Q8IW93 802 aa16.92■□□□□ 0.3
PHF1-211ENST00000495509 CXorf38Q8TB03 319 aa16.92■□□□□ 0.3
PHF1-211ENST00000495509 ABHD8Q96I13 439 aa16.92■□□□□ 0.3
PHF1-211ENST00000495509 NUP58Q9BVL2 599 aa16.92■□□□□ 0.3
PHF1-211ENST00000495509 TUBGCP4Q9UGJ1 667 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms