RNA–Protein interactions for RNA: ENST00000494891.5

NEPRO-222, Transcript of nucleolus and neural progenitor protein, human

TSL 4

Gene NEPRO, Length 547 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEPRO-222	ENST00000494891	OLFML3	Q9NRN5	406 aa		11.24	□□□□□ -0.61
NEPRO-222	ENST00000494891	ZDHHC7	Q9NXF8	308 aa		11.24	□□□□□ -0.61
NEPRO-222	ENST00000494891	STYXL1	Q9Y6J8	313 aa		11.24	□□□□□ -0.61
NEPRO-222	ENST00000494891	PLXNA3	P51805	1871 aa		11.23	□□□□□ -0.61
NEPRO-222	ENST00000494891		A0A0B4J269	797 aa		11.23	□□□□□ -0.61
NEPRO-222	ENST00000494891	TTC26	A0AVF1	554 aa		11.23	□□□□□ -0.61
NEPRO-222	ENST00000494891	CASTOR2	A6NHX0	329 aa		11.23	□□□□□ -0.61
NEPRO-222	ENST00000494891	SPTLC2	O15270	562 aa		11.23	□□□□□ -0.61
NEPRO-222	ENST00000494891	TBCA	O75347	108 aa	Known RBP	11.23	□□□□□ -0.61
NEPRO-222	ENST00000494891	POU2F2	P09086	479 aa		11.23	□□□□□ -0.61
NEPRO-222	ENST00000494891	ZSCAN22	P10073	491 aa	Predicted RBP	11.23	□□□□□ -0.61
NEPRO-222	ENST00000494891	GAP43	P17677	238 aa		11.23	□□□□□ -0.61
NEPRO-222	ENST00000494891	CYP3A5	P20815	502 aa		11.23	□□□□□ -0.61
NEPRO-222	ENST00000494891	HOXA9	P31269	272 aa		11.23	□□□□□ -0.61
NEPRO-222	ENST00000494891	CA8	P35219	290 aa		11.23	□□□□□ -0.61
NEPRO-222	ENST00000494891	CLCNKB	P51801	687 aa		11.23	□□□□□ -0.61
NEPRO-222	ENST00000494891	CACNB1	Q02641	598 aa	Predicted RBP	11.23	□□□□□ -0.61
NEPRO-222	ENST00000494891	SOX4	Q06945	474 aa	Predicted RBP	11.23	□□□□□ -0.61
NEPRO-222	ENST00000494891	ZBTB6	Q15916	424 aa		11.23	□□□□□ -0.61
NEPRO-222	ENST00000494891	RTP2	Q5QGT7	225 aa		11.23	□□□□□ -0.61
NEPRO-222	ENST00000494891	RRAGB	Q5VZM2	374 aa		11.23	□□□□□ -0.61
NEPRO-222	ENST00000494891	CNNM4	Q6P4Q7	775 aa		11.23	□□□□□ -0.61
NEPRO-222	ENST00000494891	SV2B	Q7L1I2	683 aa		11.23	□□□□□ -0.61
NEPRO-222	ENST00000494891	ZNF720	Q7Z2F6	126 aa		11.23	□□□□□ -0.61
NEPRO-222	ENST00000494891	BMP8A	Q7Z5Y6	402 aa		11.23	□□□□□ -0.61
NEPRO-222	ENST00000494891	ZDHHC14	Q8IZN3	488 aa		11.23	□□□□□ -0.61
NEPRO-222	ENST00000494891	PLCD3	Q8N3E9	789 aa		11.23	□□□□□ -0.61
NEPRO-222	ENST00000494891	RASSF8	Q8NHQ8	419 aa		11.23	□□□□□ -0.61
NEPRO-222	ENST00000494891	RIN2	Q8WYP3	895 aa	Predicted RBP	11.23	□□□□□ -0.61
NEPRO-222	ENST00000494891	DDX12P	Q92771	950 aa		11.23	□□□□□ -0.61
NEPRO-222	ENST00000494891	EDA	Q92838	391 aa		11.23	□□□□□ -0.61
NEPRO-222	ENST00000494891	ZBTB45	Q96K62	511 aa	Predicted RBP	11.23	□□□□□ -0.61
NEPRO-222	ENST00000494891	CLSTN3	Q9BQT9	956 aa		11.23	□□□□□ -0.61
NEPRO-222	ENST00000494891	HAPLN2	Q9GZV7	340 aa		11.23	□□□□□ -0.61
NEPRO-222	ENST00000494891	CUEDC2	Q9H467	287 aa		11.23	□□□□□ -0.61
NEPRO-222	ENST00000494891	POMK	Q9H5K3	350 aa		11.23	□□□□□ -0.61
NEPRO-222	ENST00000494891	BACE2	Q9Y5Z0	518 aa		11.23	□□□□□ -0.61
NEPRO-222	ENST00000494891		K7ENM7	598 aa		11.22	□□□□□ -0.61
NEPRO-222	ENST00000494891	C2CD2L	O14523	706 aa		11.22	□□□□□ -0.61
NEPRO-222	ENST00000494891	HNRNPDL	O14979	420 aa	Known RBP	11.22	□□□□□ -0.61
NEPRO-222	ENST00000494891	SYN3	O14994	580 aa		11.22	□□□□□ -0.61
NEPRO-222	ENST00000494891	OGT	O15294	1046 aa		11.22	□□□□□ -0.61
NEPRO-222	ENST00000494891	TGM5	O43548	720 aa		11.22	□□□□□ -0.61
NEPRO-222	ENST00000494891	TECTA	O75443	2155 aa		11.22	□□□□□ -0.61
NEPRO-222	ENST00000494891	B3GAT3	O94766	335 aa		11.22	□□□□□ -0.61
NEPRO-222	ENST00000494891	F13A1	P00488	732 aa		11.22	□□□□□ -0.61
NEPRO-222	ENST00000494891	PAX3	P23760	479 aa		11.22	□□□□□ -0.61
NEPRO-222	ENST00000494891	LRPAP1	P30533	357 aa		11.22	□□□□□ -0.61
NEPRO-222	ENST00000494891	LIG4	P49917	911 aa		11.22	□□□□□ -0.61
NEPRO-222	ENST00000494891	MRPL58	Q14197	206 aa	Known RBP	11.22	□□□□□ -0.61
NEPRO-222	ENST00000494891	E2F4	Q16254	413 aa		11.22	□□□□□ -0.61
NEPRO-222	ENST00000494891	GLRA4	Q5JXX5	417 aa		11.22	□□□□□ -0.61
NEPRO-222	ENST00000494891	SPECC1	Q5M775	1068 aa		11.22	□□□□□ -0.61
NEPRO-222	ENST00000494891	RARS2	Q5T160	578 aa	Known RBP	11.22	□□□□□ -0.61
NEPRO-222	ENST00000494891	FAM171A1	Q5VUB5	890 aa		11.22	□□□□□ -0.61
NEPRO-222	ENST00000494891	C2orf16	Q68DN1	1984 aa		11.22	□□□□□ -0.61
NEPRO-222	ENST00000494891	SLFN12L	Q6IEE8	588 aa		11.22	□□□□□ -0.61
NEPRO-222	ENST00000494891	SLC39A4	Q6P5W5	647 aa		11.22	□□□□□ -0.61
NEPRO-222	ENST00000494891	ZBTB33	Q86T24	672 aa		11.22	□□□□□ -0.61
NEPRO-222	ENST00000494891	CD302	Q8IX05	232 aa		11.22	□□□□□ -0.61
NEPRO-222	ENST00000494891	C3orf58	Q8NDZ4	430 aa		11.22	□□□□□ -0.61
NEPRO-222	ENST00000494891	MAN1C1	Q9NR34	630 aa		11.22	□□□□□ -0.61
NEPRO-222	ENST00000494891	KBTBD4	Q9NVX7	518 aa		11.22	□□□□□ -0.61
NEPRO-222	ENST00000494891	ANKFY1	Q9P2R3	1169 aa		11.22	□□□□□ -0.61
NEPRO-222	ENST00000494891	MTRR	Q9UBK8	725 aa		11.22	□□□□□ -0.61
NEPRO-222	ENST00000494891	CACNG4	Q9UBN1	327 aa		11.22	□□□□□ -0.61
NEPRO-222	ENST00000494891	FBXW11	Q9UKB1	542 aa		11.22	□□□□□ -0.61
NEPRO-222	ENST00000494891		A0A087X0B3	334 aa		11.21	□□□□□ -0.61
NEPRO-222	ENST00000494891	MYMK	A6NI61	221 aa		11.21	□□□□□ -0.61
NEPRO-222	ENST00000494891	PODXL	O00592	558 aa		11.21	□□□□□ -0.61
NEPRO-222	ENST00000494891	TBC1D4	O60343	1298 aa		11.21	□□□□□ -0.61
NEPRO-222	ENST00000494891	CUTA	O60888	179 aa		11.21	□□□□□ -0.61
NEPRO-222	ENST00000494891	ZMYND10	O75800	440 aa		11.21	□□□□□ -0.61
NEPRO-222	ENST00000494891	KRT18	P05783	430 aa	Known RBP	11.21	□□□□□ -0.61
NEPRO-222	ENST00000494891	CEBPZ	Q03701	1054 aa	Known RBP	11.21	□□□□□ -0.61
NEPRO-222	ENST00000494891	ALCAM	Q13740	583 aa		11.21	□□□□□ -0.61
NEPRO-222	ENST00000494891	RAB33A	Q14088	237 aa		11.21	□□□□□ -0.61
NEPRO-222	ENST00000494891	DHX8	Q14562	1220 aa	Known RBP	11.21	□□□□□ -0.61
NEPRO-222	ENST00000494891	STK38	Q15208	465 aa		11.21	□□□□□ -0.61
NEPRO-222	ENST00000494891	PSMD5	Q16401	504 aa		11.21	□□□□□ -0.61
NEPRO-222	ENST00000494891	PTPN21	Q16825	1174 aa		11.21	□□□□□ -0.61
NEPRO-222	ENST00000494891	UVSSA	Q2YD98	709 aa		11.21	□□□□□ -0.61
NEPRO-222	ENST00000494891	AXDND1	Q5T1B0	1012 aa	Predicted RBP	11.21	□□□□□ -0.61
NEPRO-222	ENST00000494891	SLC8B1	Q6J4K2	584 aa		11.21	□□□□□ -0.61
NEPRO-222	ENST00000494891	TMC5	Q6UXY8	1006 aa		11.21	□□□□□ -0.61
NEPRO-222	ENST00000494891	ANKS3	Q6ZW76	656 aa		11.21	□□□□□ -0.61
NEPRO-222	ENST00000494891	C12orf76	Q8N812	135 aa	Predicted RBP	11.21	□□□□□ -0.61
NEPRO-222	ENST00000494891	KCNG4	Q8TDN1	519 aa		11.21	□□□□□ -0.61
NEPRO-222	ENST00000494891	RABGGTA	Q92696	567 aa		11.21	□□□□□ -0.61
NEPRO-222	ENST00000494891	ZNF707	Q96C28	371 aa	Predicted RBP	11.21	□□□□□ -0.61
NEPRO-222	ENST00000494891	RPGRIP1	Q96KN7	1286 aa		11.21	□□□□□ -0.61
NEPRO-222	ENST00000494891	SUSD3	Q96L08	255 aa		11.21	□□□□□ -0.61
NEPRO-222	ENST00000494891	LRRC27	Q9C0I9	530 aa		11.21	□□□□□ -0.61
NEPRO-222	ENST00000494891	TNMD	Q9H2S6	317 aa		11.21	□□□□□ -0.61
NEPRO-222	ENST00000494891	WDR6	Q9NNW5	1121 aa	Known RBP	11.21	□□□□□ -0.61
NEPRO-222	ENST00000494891	FOXD4L1	Q9NU39	408 aa		11.21	□□□□□ -0.61
NEPRO-222	ENST00000494891	MUTYH	Q9UIF7	546 aa		11.21	□□□□□ -0.61
NEPRO-222	ENST00000494891	CPSF3	Q9UKF6	684 aa	Known RBP	11.21	□□□□□ -0.61
NEPRO-222	ENST00000494891	DERA	Q9Y315	318 aa		11.21	□□□□□ -0.61
NEPRO-222	ENST00000494891	CCDC195	A0A1B0GUA6	201 aa		11.2	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms