RNA–Protein interactions for RNA: ENST00000494539.5

CLHC1-213, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 4

Gene CLHC1, Length 596 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-213ENST00000494539 ACAP2Q15057 778 aa4.27□□□□□ -1.73
CLHC1-213ENST00000494539 CSRP2Q16527 193 aa4.27□□□□□ -1.73
CLHC1-213ENST00000494539 ATP2B3Q16720 1220 aa4.27□□□□□ -1.73
CLHC1-213ENST00000494539 PTPN21Q16825 1174 aa4.27□□□□□ -1.73
CLHC1-213ENST00000494539 BEAN1Q3B7T3 259 aa4.27□□□□□ -1.73
CLHC1-213ENST00000494539 FAM102AQ5T9C2 384 aaPredicted RBP4.27□□□□□ -1.73
CLHC1-213ENST00000494539 AGAP9Q5VTM2 703 aa4.27□□□□□ -1.73
CLHC1-213ENST00000494539 OTUD7BQ6GQQ9 843 aa4.27□□□□□ -1.73
CLHC1-213ENST00000494539 RHOT2Q8IXI1 618 aa4.27□□□□□ -1.73
CLHC1-213ENST00000494539 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.27□□□□□ -1.73
CLHC1-213ENST00000494539 STAG1Q8WVM7 1258 aa4.27□□□□□ -1.73
CLHC1-213ENST00000494539 C7orf25Q9BPX7 421 aa4.27□□□□□ -1.73
CLHC1-213ENST00000494539 MLST8Q9BVC4 326 aa4.27□□□□□ -1.73
CLHC1-213ENST00000494539 CYP4F11Q9HBI6 524 aa4.27□□□□□ -1.73
CLHC1-213ENST00000494539 DDX56Q9NY93 547 aaKnown RBP4.27□□□□□ -1.73
CLHC1-213ENST00000494539 FAM30AQ9NZY2 134 aa4.27□□□□□ -1.73
CLHC1-213ENST00000494539 AJAP1Q9UKB5 411 aaPredicted RBP4.27□□□□□ -1.73
CLHC1-213ENST00000494539 MRFAP1Q9Y605 127 aa4.27□□□□□ -1.73
CLHC1-213ENST00000494539 CENPVL1A0A0U1RR11 272 aa4.26□□□□□ -1.73
CLHC1-213ENST00000494539 DRGXA6NNA5 263 aa4.26□□□□□ -1.73
CLHC1-213ENST00000494539 XPOTO43592 962 aaKnown RBP4.26□□□□□ -1.73
CLHC1-213ENST00000494539 NDUFA10O95299 355 aa4.26□□□□□ -1.73
CLHC1-213ENST00000494539 POMCP01189 267 aa4.26□□□□□ -1.73
CLHC1-213ENST00000494539 ALAS1P13196 640 aa4.26□□□□□ -1.73
CLHC1-213ENST00000494539 KRT4P19013 534 aa4.26□□□□□ -1.73
CLHC1-213ENST00000494539 DDX6P26196 483 aaKnown RBP eCLIP4.26□□□□□ -1.73
CLHC1-213ENST00000494539 WASP42768 502 aa4.26□□□□□ -1.73
CLHC1-213ENST00000494539 ALDH1A3P47895 512 aa4.26□□□□□ -1.73
CLHC1-213ENST00000494539 SLC16A1P53985 500 aa4.26□□□□□ -1.73
CLHC1-213ENST00000494539 FAM189BP81408 668 aa4.26□□□□□ -1.73
CLHC1-213ENST00000494539 GUCY1B3Q02153 619 aa4.26□□□□□ -1.73
CLHC1-213ENST00000494539 SMN1Q16637 294 aaKnown RBP4.26□□□□□ -1.73
CLHC1-213ENST00000494539 PDCD4Q53EL6 469 aaKnown RBP4.26□□□□□ -1.73
CLHC1-213ENST00000494539 Q6ZPA2 131 aa4.26□□□□□ -1.73
CLHC1-213ENST00000494539 SEM1Q6ZVN7 128 aa4.26□□□□□ -1.73
CLHC1-213ENST00000494539 MIGA2Q7L4E1 593 aa4.26□□□□□ -1.73
CLHC1-213ENST00000494539 ARHGEF19Q8IW93 802 aa4.26□□□□□ -1.73
CLHC1-213ENST00000494539 PPM1NQ8N819 430 aa4.26□□□□□ -1.73
CLHC1-213ENST00000494539 FBXO18Q8NFZ0 1043 aa4.26□□□□□ -1.73
CLHC1-213ENST00000494539 PHACTR3Q96KR7 559 aa4.26□□□□□ -1.73
CLHC1-213ENST00000494539 SMAD5Q99717 465 aaKnown RBP4.26□□□□□ -1.73
CLHC1-213ENST00000494539 LDAHQ9H6V9 325 aa4.26□□□□□ -1.73
CLHC1-213ENST00000494539 C11orf21Q9P2W6 132 aa4.26□□□□□ -1.73
CLHC1-213ENST00000494539 USP15Q9Y4E8 981 aaPredicted RBP4.26□□□□□ -1.73
CLHC1-213ENST00000494539 DMRT1Q9Y5R6 373 aa4.26□□□□□ -1.73
CLHC1-213ENST00000494539 MARCH11A6NNE9 402 aa4.25□□□□□ -1.73
CLHC1-213ENST00000494539 ZNF185O15231 689 aa4.25□□□□□ -1.73
CLHC1-213ENST00000494539 NDUFS2O75306 463 aa4.25□□□□□ -1.73
CLHC1-213ENST00000494539 GCP02774 474 aa4.25□□□□□ -1.73
CLHC1-213ENST00000494539 PDGFRBP09619 1106 aa4.25□□□□□ -1.73
CLHC1-213ENST00000494539 C5AR1P21730 350 aa4.25□□□□□ -1.73
CLHC1-213ENST00000494539 CCND1P24385 295 aa4.25□□□□□ -1.73
CLHC1-213ENST00000494539 AVPR1BP47901 424 aa4.25□□□□□ -1.73
CLHC1-213ENST00000494539 USP14P54578 494 aa4.25□□□□□ -1.73
CLHC1-213ENST00000494539 SEPT2Q15019 361 aa4.25□□□□□ -1.73
CLHC1-213ENST00000494539 SPDYE7PQ495Y7 208 aa4.25□□□□□ -1.73
CLHC1-213ENST00000494539 ZNF529Q6P280 563 aa4.25□□□□□ -1.73
CLHC1-213ENST00000494539 PCSK4Q6UW60 755 aa4.25□□□□□ -1.73
CLHC1-213ENST00000494539 PNMA8AQ86V59 439 aaPredicted RBP4.25□□□□□ -1.73
CLHC1-213ENST00000494539 CPEB3Q8NE35 698 aaKnown RBP4.25□□□□□ -1.73
CLHC1-213ENST00000494539 OR56A1Q8NGH5 318 aa4.25□□□□□ -1.73
CLHC1-213ENST00000494539 TEKT5Q96M29 485 aa4.25□□□□□ -1.73
CLHC1-213ENST00000494539 RNPEPQ9H4A4 650 aa4.25□□□□□ -1.73
CLHC1-213ENST00000494539 SERHL2Q9H4I8 314 aa4.25□□□□□ -1.73
CLHC1-213ENST00000494539 TUBD1Q9UJT1 453 aa4.25□□□□□ -1.73
CLHC1-213ENST00000494539 CFIP05156 583 aa4.24□□□□□ -1.73
CLHC1-213ENST00000494539 ZEB1P37275 1124 aaPredicted RBP4.24□□□□□ -1.73
CLHC1-213ENST00000494539 SLC6A9P48067 706 aa4.24□□□□□ -1.73
CLHC1-213ENST00000494539 PTTG1IPP53801 180 aa4.24□□□□□ -1.73
CLHC1-213ENST00000494539 CREMQ03060 361 aa4.24□□□□□ -1.73
CLHC1-213ENST00000494539 FSTL1Q12841 308 aa4.24□□□□□ -1.73
CLHC1-213ENST00000494539 MTM1Q13496 603 aa4.24□□□□□ -1.73
CLHC1-213ENST00000494539 ODF1Q14990 250 aa4.24□□□□□ -1.73
CLHC1-213ENST00000494539 HECTD2Q5U5R9 776 aa4.24□□□□□ -1.73
CLHC1-213ENST00000494539 EFCAB2Q5VUJ9 269 aa4.24□□□□□ -1.73
CLHC1-213ENST00000494539 METRNLQ641Q3 311 aa4.24□□□□□ -1.73
CLHC1-213ENST00000494539 MED25Q71SY5 747 aa4.24□□□□□ -1.73
CLHC1-213ENST00000494539 VRK3Q8IV63 474 aa4.24□□□□□ -1.73
CLHC1-213ENST00000494539 MAPKAPK5Q8IW41 473 aa4.24□□□□□ -1.73
CLHC1-213ENST00000494539 LCORLQ8N3X6 602 aa4.24□□□□□ -1.73
CLHC1-213ENST00000494539 SUPT20HQ8NEM7 779 aa4.24□□□□□ -1.73
CLHC1-213ENST00000494539 NRG4Q8WWG1 115 aa4.24□□□□□ -1.73
CLHC1-213ENST00000494539 STON2Q8WXE9 905 aa4.24□□□□□ -1.73
CLHC1-213ENST00000494539 CHMP4CQ96CF2 233 aa4.24□□□□□ -1.73
CLHC1-213ENST00000494539 AGAP2Q99490 1192 aa4.24□□□□□ -1.73
CLHC1-213ENST00000494539 TEX101Q9BY14 249 aa4.24□□□□□ -1.73
CLHC1-213ENST00000494539 WDR11Q9BZH6 1224 aa4.24□□□□□ -1.73
CLHC1-213ENST00000494539 TOR3AQ9H497 397 aa4.24□□□□□ -1.73
CLHC1-213ENST00000494539 KLHL11Q9NVR0 708 aa4.24□□□□□ -1.73
CLHC1-213ENST00000494539 PACSIN3Q9UKS6 424 aa4.24□□□□□ -1.73
CLHC1-213ENST00000494539 INTUQ9ULD6 942 aa4.24□□□□□ -1.73
CLHC1-213ENST00000494539 SIK3Q9Y2K2 1263 aa4.24□□□□□ -1.73
CLHC1-213ENST00000494539 NOX1Q9Y5S8 564 aa4.24□□□□□ -1.73
CLHC1-213ENST00000494539 PNPLA7Q6ZV29 1317 aa4.23□□□□□ -1.73
CLHC1-213ENST00000494539 GRID2IPA4D2P6 1211 aa4.23□□□□□ -1.73
CLHC1-213ENST00000494539 LPXNO60711 386 aa4.23□□□□□ -1.73
CLHC1-213ENST00000494539 ALDH1L1O75891 902 aa4.23□□□□□ -1.73
CLHC1-213ENST00000494539 CDKL5O76039 1030 aa4.23□□□□□ -1.73
CLHC1-213ENST00000494539 FOSP01100 380 aaPredicted RBP4.23□□□□□ -1.73
CLHC1-213ENST00000494539 HKR1P10072 659 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms