RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 PDCL3Q9H2J4 239 aa17.79■□□□□ 0.44
ATG4B-225ENST00000494465 CSDE1O75534 798 aaKnown RBP17.78■□□□□ 0.44
ATG4B-225ENST00000494465 OLFML2BQ68BL8 750 aa17.78■□□□□ 0.44
ATG4B-225ENST00000494465 CEP120Q8N960 986 aa17.78■□□□□ 0.44
ATG4B-225ENST00000494465 CTNNBL1Q8WYA6 563 aaPredicted RBP17.78■□□□□ 0.44
ATG4B-225ENST00000494465 PPP1R16BQ96T49 567 aa17.78■□□□□ 0.44
ATG4B-225ENST00000494465 PNKPQ96T60 521 aa17.78■□□□□ 0.44
ATG4B-225ENST00000494465 CDT1Q9H211 546 aa17.78■□□□□ 0.44
ATG4B-225ENST00000494465 PRMT7Q9NVM4 692 aaPredicted RBP17.78■□□□□ 0.44
ATG4B-225ENST00000494465 GJD2Q9UKL4 321 aa17.78■□□□□ 0.44
ATG4B-225ENST00000494465 AKT3Q9Y243 479 aa17.78■□□□□ 0.44
ATG4B-225ENST00000494465 DYNC1LI2O43237 492 aaPredicted RBP17.77■□□□□ 0.44
ATG4B-225ENST00000494465 FTLP02792 175 aaPredicted RBP17.77■□□□□ 0.44
ATG4B-225ENST00000494465 ACO1P21399 889 aaKnown RBP17.77■□□□□ 0.44
ATG4B-225ENST00000494465 CDR2Q01850 454 aa17.77■□□□□ 0.44
ATG4B-225ENST00000494465 CAGE1Q8TC20 777 aa17.77■□□□□ 0.44
ATG4B-225ENST00000494465 SMARCAL1Q9NZC9 954 aa17.77■□□□□ 0.44
ATG4B-225ENST00000494465 EHD2Q9NZN4 543 aa17.77■□□□□ 0.44
ATG4B-225ENST00000494465 RAB21Q9UL25 225 aa17.77■□□□□ 0.44
ATG4B-225ENST00000494465 UMODL1Q5DID0 1318 aa17.77■□□□□ 0.44
ATG4B-225ENST00000494465 RRP9O43818 475 aaKnown RBP17.77■□□□□ 0.44
ATG4B-225ENST00000494465 RHOXF2BP0C7M4 288 aa17.77■□□□□ 0.44
ATG4B-225ENST00000494465 GZMAP12544 262 aa17.77■□□□□ 0.44
ATG4B-225ENST00000494465 CYP2C19P33261 490 aa17.77■□□□□ 0.44
ATG4B-225ENST00000494465 AP3M2P53677 418 aa17.77■□□□□ 0.44
ATG4B-225ENST00000494465 INHBEP58166 350 aa17.77■□□□□ 0.44
ATG4B-225ENST00000494465 NCOA4Q13772 614 aa17.77■□□□□ 0.44
ATG4B-225ENST00000494465 LENG1Q96BZ8 264 aaPredicted RBP17.77■□□□□ 0.44
ATG4B-225ENST00000494465 RHOXF2Q9BQY4 288 aa17.77■□□□□ 0.44
ATG4B-225ENST00000494465 COG5Q9UP83 839 aa17.77■□□□□ 0.44
ATG4B-225ENST00000494465 STXBP5LQ9Y2K9 1186 aa17.77■□□□□ 0.44
ATG4B-225ENST00000494465 NUB1Q9Y5A7 615 aa17.77■□□□□ 0.44
ATG4B-225ENST00000494465 GPR25O00155 361 aa17.76■□□□□ 0.43
ATG4B-225ENST00000494465 RTN2O75298 545 aa17.76■□□□□ 0.43
ATG4B-225ENST00000494465 CST3P01034 146 aaPredicted RBP17.76■□□□□ 0.43
ATG4B-225ENST00000494465 CALCAP01258 141 aa17.76■□□□□ 0.43
ATG4B-225ENST00000494465 TMOD1P28289 359 aa17.76■□□□□ 0.43
ATG4B-225ENST00000494465 PDE6CP51160 858 aa17.76■□□□□ 0.43
ATG4B-225ENST00000494465 NOP14P78316 857 aaKnown RBP17.76■□□□□ 0.43
ATG4B-225ENST00000494465 IRX5P78411 483 aaPredicted RBP17.76■□□□□ 0.43
ATG4B-225ENST00000494465 ITIH3Q06033 890 aa17.76■□□□□ 0.43
ATG4B-225ENST00000494465 CUL2Q13617 745 aa17.76■□□□□ 0.43
ATG4B-225ENST00000494465 TMEM192Q8IY95 271 aa17.76■□□□□ 0.43
ATG4B-225ENST00000494465 THNSL1Q8IYQ7 743 aa17.76■□□□□ 0.43
ATG4B-225ENST00000494465 KIAA0319LQ8IZA0 1049 aa17.76■□□□□ 0.43
ATG4B-225ENST00000494465 KAT2BQ92831 832 aa17.76■□□□□ 0.43
ATG4B-225ENST00000494465 MTMR12Q9C0I1 747 aa17.76■□□□□ 0.43
ATG4B-225ENST00000494465 ABCB6Q9NP58 842 aa17.76■□□□□ 0.43
ATG4B-225ENST00000494465 TLL2Q9Y6L7 1015 aa17.76■□□□□ 0.43
ATG4B-225ENST00000494465 KIF4AO95239 1232 aa17.76■□□□□ 0.43
ATG4B-225ENST00000494465 F2P00734 622 aa17.76■□□□□ 0.43
ATG4B-225ENST00000494465 CLTAP09496 248 aa17.76■□□□□ 0.43
ATG4B-225ENST00000494465 KRT5P13647 590 aa17.76■□□□□ 0.43
ATG4B-225ENST00000494465 TCEAL1Q15170 157 aa17.76■□□□□ 0.43
ATG4B-225ENST00000494465 EFCAB13Q8IY85 973 aa17.76■□□□□ 0.43
ATG4B-225ENST00000494465 MS4A14Q96JA4 679 aa17.76■□□□□ 0.43
ATG4B-225ENST00000494465 MEFVO15553 781 aaPredicted RBP17.75■□□□□ 0.43
ATG4B-225ENST00000494465 BUB1BO60566 1050 aaPredicted RBP17.75■□□□□ 0.43
ATG4B-225ENST00000494465 ASS1P00966 412 aaKnown RBP17.75■□□□□ 0.43
ATG4B-225ENST00000494465 CYP2B6P20813 491 aa17.75■□□□□ 0.43
ATG4B-225ENST00000494465 CTGFP29279 349 aa17.75■□□□□ 0.43
ATG4B-225ENST00000494465 C2orf54Q08AI8 447 aa17.75■□□□□ 0.43
ATG4B-225ENST00000494465 CRHR2Q13324 411 aa17.75■□□□□ 0.43
ATG4B-225ENST00000494465 SETD4Q9NVD3 440 aa17.75■□□□□ 0.43
ATG4B-225ENST00000494465 ARGLU1Q9NWB6 273 aaPredicted RBP17.75■□□□□ 0.43
ATG4B-225ENST00000494465 B4GALT4O60513 344 aa17.75■□□□□ 0.43
ATG4B-225ENST00000494465 PHACTR2O75167 634 aa17.75■□□□□ 0.43
ATG4B-225ENST00000494465 ZRANB2O95218 330 aaKnown RBP eCLIP17.75■□□□□ 0.43
ATG4B-225ENST00000494465 DNA2P51530 1060 aa17.75■□□□□ 0.43
ATG4B-225ENST00000494465 HADHBP55084 474 aaKnown RBP17.75■□□□□ 0.43
ATG4B-225ENST00000494465 OSTNP61366 133 aa17.75■□□□□ 0.43
ATG4B-225ENST00000494465 SURF1Q15526 300 aa17.75■□□□□ 0.43
ATG4B-225ENST00000494465 TLK2Q86UE8 772 aa17.75■□□□□ 0.43
ATG4B-225ENST00000494465 NT5DC3Q86UY8 548 aa17.75■□□□□ 0.43
ATG4B-225ENST00000494465 SPATA4Q8NEY3 305 aa17.75■□□□□ 0.43
ATG4B-225ENST00000494465 LMBR1Q8WVP7 490 aa17.75■□□□□ 0.43
ATG4B-225ENST00000494465 FAM212AQ96EL1 285 aa17.75■□□□□ 0.43
ATG4B-225ENST00000494465 PDZD7Q9H5P4 517 aa17.75■□□□□ 0.43
ATG4B-225ENST00000494465 ZFYVE28Q9HCC9 887 aa17.75■□□□□ 0.43
ATG4B-225ENST00000494465 CNTN6Q9UQ52 1028 aa17.75■□□□□ 0.43
ATG4B-225ENST00000494465 CENPFP49454 3210 aa17.74■□□□□ 0.43
ATG4B-225ENST00000494465 ARF4P18085 180 aaPredicted RBP17.74■□□□□ 0.43
ATG4B-225ENST00000494465 RPS6KA1Q15418 735 aa17.74■□□□□ 0.43
ATG4B-225ENST00000494465 DUOXA2Q1HG44 320 aa17.74■□□□□ 0.43
ATG4B-225ENST00000494465 ZIC5Q96T25 663 aa17.74■□□□□ 0.43
ATG4B-225ENST00000494465 RNF14Q9UBS8 474 aa17.74■□□□□ 0.43
ATG4B-225ENST00000494465 ZEB2O60315 1214 aa17.74■□□□□ 0.43
ATG4B-225ENST00000494465 CXCL8P10145 99 aa17.74■□□□□ 0.43
ATG4B-225ENST00000494465 RGS2P41220 211 aa17.74■□□□□ 0.43
ATG4B-225ENST00000494465 PTPROQ16827 1216 aa17.74■□□□□ 0.43
ATG4B-225ENST00000494465 TMEM132AQ24JP5 1023 aa17.74■□□□□ 0.43
ATG4B-225ENST00000494465 CC2D1AQ6P1N0 951 aaPredicted RBP17.74■□□□□ 0.43
ATG4B-225ENST00000494465 DAAM2Q86T65 1068 aa17.74■□□□□ 0.43
ATG4B-225ENST00000494465 SYCE1Q8N0S2 351 aa17.74■□□□□ 0.43
ATG4B-225ENST00000494465 UBR7Q8N806 425 aa17.74■□□□□ 0.43
ATG4B-225ENST00000494465 CPB2Q96IY4 423 aa17.74■□□□□ 0.43
ATG4B-225ENST00000494465 APBA2Q99767 749 aa17.74■□□□□ 0.43
ATG4B-225ENST00000494465 PCDHB2Q9Y5E7 798 aa17.74■□□□□ 0.43
ATG4B-225ENST00000494465 CCDC151A5D8V7 595 aa17.73■□□□□ 0.43
ATG4B-225ENST00000494465 RRN3P2A6NIE6 340 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms