RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 CLCNKBP51801 687 aa14.68□□□□□ -0.06
CTDSP1-212ENST00000494067 PSMD5Q16401 504 aa14.68□□□□□ -0.06
CTDSP1-212ENST00000494067 ZNF568Q3ZCX4 644 aa14.68□□□□□ -0.06
CTDSP1-212ENST00000494067 SEZ6Q53EL9 994 aa14.68□□□□□ -0.06
CTDSP1-212ENST00000494067 XKR4Q5GH76 650 aa14.68□□□□□ -0.06
CTDSP1-212ENST00000494067 LARP1BQ659C4 914 aaKnown RBP14.68□□□□□ -0.06
CTDSP1-212ENST00000494067 ARL6IP4Q66PJ3 421 aaKnown RBP14.68□□□□□ -0.06
CTDSP1-212ENST00000494067 TMEM161BQ8NDZ6 487 aa14.68□□□□□ -0.06
CTDSP1-212ENST00000494067 PIK3R5Q8WYR1 880 aa14.68□□□□□ -0.06
CTDSP1-212ENST00000494067 NXPE3Q969Y0 559 aa14.68□□□□□ -0.06
CTDSP1-212ENST00000494067 DDX27Q96GQ7 796 aaKnown RBP14.68□□□□□ -0.06
CTDSP1-212ENST00000494067 ACAP3Q96P50 834 aa14.68□□□□□ -0.06
CTDSP1-212ENST00000494067 PRKD2Q9BZL6 878 aa14.68□□□□□ -0.06
CTDSP1-212ENST00000494067 KCNK12Q9HB15 430 aa14.68□□□□□ -0.06
CTDSP1-212ENST00000494067 NOTCH4Q99466 2003 aa14.68□□□□□ -0.06
CTDSP1-212ENST00000494067 COL4A3Q01955 1670 aa14.68□□□□□ -0.06
CTDSP1-212ENST00000494067 MYH15Q9Y2K3 1946 aa14.67□□□□□ -0.06
CTDSP1-212ENST00000494067 SMIM28A0A1B0GU29 152 aa14.67□□□□□ -0.06
CTDSP1-212ENST00000494067 H0YCG3 227 aa14.67□□□□□ -0.06
CTDSP1-212ENST00000494067 XYLBO75191 536 aa14.67□□□□□ -0.06
CTDSP1-212ENST00000494067 ZMYND10O75800 440 aa14.67□□□□□ -0.06
CTDSP1-212ENST00000494067 HNRNPA1P09651 372 aaKnown RBP eCLIP14.67□□□□□ -0.06
CTDSP1-212ENST00000494067 PLA2G4BP0C869 781 aa14.67□□□□□ -0.06
CTDSP1-212ENST00000494067 MAPTP10636 758 aaKnown RBP14.67□□□□□ -0.06
CTDSP1-212ENST00000494067 BRCC3P46736 316 aa14.67□□□□□ -0.06
CTDSP1-212ENST00000494067 PPM1LQ5SGD2 360 aa14.67□□□□□ -0.06
CTDSP1-212ENST00000494067 FAM173BQ6P4H8 233 aa14.67□□□□□ -0.06
CTDSP1-212ENST00000494067 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.67□□□□□ -0.06
CTDSP1-212ENST00000494067 USP49Q70CQ1 688 aa14.67□□□□□ -0.06
CTDSP1-212ENST00000494067 C18orf25Q96B23 403 aaPredicted RBP14.67□□□□□ -0.06
CTDSP1-212ENST00000494067 SNX27Q96L92 541 aa14.67□□□□□ -0.06
CTDSP1-212ENST00000494067 MYADMQ96S97 322 aa14.67□□□□□ -0.06
CTDSP1-212ENST00000494067 PHOX2BQ99453 314 aa14.67□□□□□ -0.06
CTDSP1-212ENST00000494067 NTPCRQ9BSD7 190 aaKnown RBP14.67□□□□□ -0.06
CTDSP1-212ENST00000494067 KCND2Q9NZV8 630 aa14.67□□□□□ -0.06
CTDSP1-212ENST00000494067 TMEM189-UBE2V1I3L0A0 370 aa14.66□□□□□ -0.06
CTDSP1-212ENST00000494067 BMP15O95972 392 aa14.66□□□□□ -0.06
CTDSP1-212ENST00000494067 MCF2P10911 925 aa14.66□□□□□ -0.06
CTDSP1-212ENST00000494067 HARSP12081 509 aaKnown RBP14.66□□□□□ -0.06
CTDSP1-212ENST00000494067 PLS3P13797 630 aa14.66□□□□□ -0.06
CTDSP1-212ENST00000494067 RFX1P22670 979 aa14.66□□□□□ -0.06
CTDSP1-212ENST00000494067 MATR3P43243 847 aaKnown RBP eCLIP14.66□□□□□ -0.06
CTDSP1-212ENST00000494067 KARSQ15046 597 aaKnown RBP14.66□□□□□ -0.06
CTDSP1-212ENST00000494067 SF3A1Q15459 793 aaKnown RBP14.66□□□□□ -0.06
CTDSP1-212ENST00000494067 UPP1Q16831 310 aa14.66□□□□□ -0.06
CTDSP1-212ENST00000494067 ASTLQ6HA08 431 aaPredicted RBP14.66□□□□□ -0.06
CTDSP1-212ENST00000494067 ST13P5Q8NFI4 369 aaPredicted RBP14.66□□□□□ -0.06
CTDSP1-212ENST00000494067 RASSF8Q8NHQ8 419 aa14.66□□□□□ -0.06
CTDSP1-212ENST00000494067 SPIRE2Q8WWL2 714 aa14.66□□□□□ -0.06
CTDSP1-212ENST00000494067 RSAD2Q8WXG1 361 aa14.66□□□□□ -0.06
CTDSP1-212ENST00000494067 CALML4Q96GE6 196 aa14.66□□□□□ -0.06
CTDSP1-212ENST00000494067 AK8Q96MA6 479 aa14.66□□□□□ -0.06
CTDSP1-212ENST00000494067 REEP2Q9BRK0 252 aa14.66□□□□□ -0.06
CTDSP1-212ENST00000494067 LARSQ9P2J5 1176 aaKnown RBP14.66□□□□□ -0.06
CTDSP1-212ENST00000494067 FBXW11Q9UKB1 542 aa14.66□□□□□ -0.06
CTDSP1-212ENST00000494067 POLIQ9UNA4 740 aa14.66□□□□□ -0.06
CTDSP1-212ENST00000494067 DUSP12Q9UNI6 340 aa14.66□□□□□ -0.06
CTDSP1-212ENST00000494067 CLIC4Q9Y696 253 aa14.66□□□□□ -0.06
CTDSP1-212ENST00000494067 ZFP37Q9Y6Q3 630 aaPredicted RBP14.66□□□□□ -0.06
CTDSP1-212ENST00000494067 MYO15AQ9UKN7 3530 aa14.66□□□□□ -0.06
CTDSP1-212ENST00000494067 ANK1P16157 1881 aa14.65□□□□□ -0.06
CTDSP1-212ENST00000494067 STK25O00506 426 aa14.65□□□□□ -0.06
CTDSP1-212ENST00000494067 SLC26A4O43511 780 aa14.65□□□□□ -0.06
CTDSP1-212ENST00000494067 PLCG1P19174 1290 aa14.65□□□□□ -0.06
CTDSP1-212ENST00000494067 FGFR3P22607 806 aa14.65□□□□□ -0.06
CTDSP1-212ENST00000494067 TKTP29401 623 aaKnown RBP14.65□□□□□ -0.06
CTDSP1-212ENST00000494067 UBA7P41226 1012 aa14.65□□□□□ -0.06
CTDSP1-212ENST00000494067 CLCN5P51795 746 aa14.65□□□□□ -0.06
CTDSP1-212ENST00000494067 NCKAP1LP55160 1127 aa14.65□□□□□ -0.06
CTDSP1-212ENST00000494067 TCF15Q12870 199 aa14.65□□□□□ -0.06
CTDSP1-212ENST00000494067 RESTQ13127 1097 aa14.65□□□□□ -0.06
CTDSP1-212ENST00000494067 MCM6Q14566 821 aa14.65□□□□□ -0.06
CTDSP1-212ENST00000494067 PTPAQ15257 358 aa14.65□□□□□ -0.06
CTDSP1-212ENST00000494067 UVSSAQ2YD98 709 aa14.65□□□□□ -0.06
CTDSP1-212ENST00000494067 SPECC1Q5M775 1068 aa14.65□□□□□ -0.06
CTDSP1-212ENST00000494067 ZBTB41Q5SVQ8 909 aa14.65□□□□□ -0.06
CTDSP1-212ENST00000494067 MPZL3Q6UWV2 235 aa14.65□□□□□ -0.06
CTDSP1-212ENST00000494067 ANKS3Q6ZW76 656 aa14.65□□□□□ -0.06
CTDSP1-212ENST00000494067 RTL10Q7L3V2 364 aa14.65□□□□□ -0.06
CTDSP1-212ENST00000494067 GET4Q7L5D6 327 aaPredicted RBP14.65□□□□□ -0.06
CTDSP1-212ENST00000494067 FLCNQ8NFG4 579 aa14.65□□□□□ -0.06
CTDSP1-212ENST00000494067 ATOH1Q92858 354 aaPredicted RBP14.65□□□□□ -0.06
CTDSP1-212ENST00000494067 FIZ1Q96SL8 496 aa14.65□□□□□ -0.06
CTDSP1-212ENST00000494067 EPS15L1Q9UBC2 864 aa14.65□□□□□ -0.06
CTDSP1-212ENST00000494067 NUB1Q9Y5A7 615 aa14.65□□□□□ -0.06
CTDSP1-212ENST00000494067 DMDP11532 3685 aa14.65□□□□□ -0.06
CTDSP1-212ENST00000494067 VPS37CA5D8V6 355 aaPredicted RBP14.64□□□□□ -0.07
CTDSP1-212ENST00000494067 NARSO43776 548 aaKnown RBP14.64□□□□□ -0.07
CTDSP1-212ENST00000494067 TOM1L1O75674 476 aa14.64□□□□□ -0.07
CTDSP1-212ENST00000494067 C8AP07357 584 aa14.64□□□□□ -0.07
CTDSP1-212ENST00000494067 FSHRP23945 695 aa14.64□□□□□ -0.07
CTDSP1-212ENST00000494067 HOXA9P31269 272 aa14.64□□□□□ -0.07
CTDSP1-212ENST00000494067 OR1D2P34982 312 aa14.64□□□□□ -0.07
CTDSP1-212ENST00000494067 NTHL1P78549 312 aa14.64□□□□□ -0.07
CTDSP1-212ENST00000494067 RAB33AQ14088 237 aa14.64□□□□□ -0.07
CTDSP1-212ENST00000494067 DHX8Q14562 1220 aaKnown RBP14.64□□□□□ -0.07
CTDSP1-212ENST00000494067 SLC10A6Q3KNW5 377 aa14.64□□□□□ -0.07
CTDSP1-212ENST00000494067 POTEHQ6S545 545 aa14.64□□□□□ -0.07
CTDSP1-212ENST00000494067 BICD1Q96G01 975 aa14.64□□□□□ -0.07
CTDSP1-212ENST00000494067 BACH2Q9BYV9 841 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms