RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 SHISA4Q96DD7 197 aa5.23□□□□□ -1.57
GTF3A-208ENST00000493903 TMX3Q96JJ7 454 aa5.23□□□□□ -1.57
GTF3A-208ENST00000493903 ITM2CQ9NQX7 267 aa5.23□□□□□ -1.57
GTF3A-208ENST00000493903 STK32BQ9NY57 414 aa5.23□□□□□ -1.57
GTF3A-208ENST00000493903 SLC39A10Q9ULF5 831 aa5.23□□□□□ -1.57
GTF3A-208ENST00000493903 SIK3Q9Y2K2 1263 aa5.23□□□□□ -1.57
GTF3A-208ENST00000493903 CRYL1Q9Y2S2 319 aa5.23□□□□□ -1.57
GTF3A-208ENST00000493903 NT5C1B-RDH14C9J2C7 533 aa5.22□□□□□ -1.57
GTF3A-208ENST00000493903 EIF3FO00303 357 aaPredicted RBP5.22□□□□□ -1.57
GTF3A-208ENST00000493903 AREL1O15033 823 aa5.22□□□□□ -1.57
GTF3A-208ENST00000493903 ZNF500O60304 480 aaPredicted RBP5.22□□□□□ -1.57
GTF3A-208ENST00000493903 GDNFP39905 211 aa5.22□□□□□ -1.57
GTF3A-208ENST00000493903 STAT5AP42229 794 aa5.22□□□□□ -1.57
GTF3A-208ENST00000493903 MAPKAPK2P49137 400 aa5.22□□□□□ -1.57
GTF3A-208ENST00000493903 GALK1P51570 392 aa5.22□□□□□ -1.57
GTF3A-208ENST00000493903 SESN2P58004 480 aaPredicted RBP5.22□□□□□ -1.57
GTF3A-208ENST00000493903 PRR5P85299 388 aa5.22□□□□□ -1.57
GTF3A-208ENST00000493903 MPP1Q00013 466 aa5.22□□□□□ -1.57
GTF3A-208ENST00000493903 CD69Q07108 199 aa5.22□□□□□ -1.57
GTF3A-208ENST00000493903 TMEM62Q0P6H9 643 aa5.22□□□□□ -1.57
GTF3A-208ENST00000493903 G3BP1Q13283 466 aaKnown RBP eCLIP5.22□□□□□ -1.57
GTF3A-208ENST00000493903 PTK2BQ14289 1009 aa5.22□□□□□ -1.57
GTF3A-208ENST00000493903 CR1LQ2VPA4 569 aa5.22□□□□□ -1.57
GTF3A-208ENST00000493903 FLYWCH1Q4VC44 716 aa5.22□□□□□ -1.57
GTF3A-208ENST00000493903 FAAH2Q6GMR7 532 aa5.22□□□□□ -1.57
GTF3A-208ENST00000493903 GGT6Q6P531 493 aa5.22□□□□□ -1.57
GTF3A-208ENST00000493903 CFAP161Q6P656 301 aa5.22□□□□□ -1.57
GTF3A-208ENST00000493903 CNKSR3Q6P9H4 555 aa5.22□□□□□ -1.57
GTF3A-208ENST00000493903 LIPIQ6XZB0 460 aa5.22□□□□□ -1.57
GTF3A-208ENST00000493903 Q6ZVL8 140 aa5.22□□□□□ -1.57
GTF3A-208ENST00000493903 TAS1R1Q7RTX1 841 aa5.22□□□□□ -1.57
GTF3A-208ENST00000493903 ZC3H18Q86VM9 953 aaKnown RBP5.22□□□□□ -1.57
GTF3A-208ENST00000493903 FAM90A1Q86YD7 464 aa5.22□□□□□ -1.57
GTF3A-208ENST00000493903 DTX3Q8N9I9 347 aa5.22□□□□□ -1.57
GTF3A-208ENST00000493903 ATG16L2Q8NAA4 619 aa5.22□□□□□ -1.57
GTF3A-208ENST00000493903 OR7D4Q8NG98 312 aa5.22□□□□□ -1.57
GTF3A-208ENST00000493903 ZNF480Q8WV37 535 aa5.22□□□□□ -1.57
GTF3A-208ENST00000493903 MUL1Q969V5 352 aa5.22□□□□□ -1.57
GTF3A-208ENST00000493903 DDX11Q96FC9 970 aa5.22□□□□□ -1.57
GTF3A-208ENST00000493903 SEC62Q99442 399 aaKnown RBP5.22□□□□□ -1.57
GTF3A-208ENST00000493903 HEPHQ9BQS7 1158 aa5.22□□□□□ -1.57
GTF3A-208ENST00000493903 MRPL46Q9H2W6 279 aaKnown RBP5.22□□□□□ -1.57
GTF3A-208ENST00000493903 TMEM8AQ9HCN3 771 aa5.22□□□□□ -1.57
GTF3A-208ENST00000493903 OBP2BQ9NPH6 170 aa5.22□□□□□ -1.57
GTF3A-208ENST00000493903 DLL4Q9NR61 685 aa5.22□□□□□ -1.57
GTF3A-208ENST00000493903 SACM1LQ9NTJ5 587 aa5.22□□□□□ -1.57
GTF3A-208ENST00000493903 C19orf73Q9NVV2 129 aa5.22□□□□□ -1.57
GTF3A-208ENST00000493903 SIDT1Q9NXL6 827 aaKnown RBP5.22□□□□□ -1.57
GTF3A-208ENST00000493903 LRFN1Q9P244 771 aa5.22□□□□□ -1.57
GTF3A-208ENST00000493903 SAE1Q9UBE0 346 aaPredicted RBP5.22□□□□□ -1.57
GTF3A-208ENST00000493903 GPR160Q9UJ42 338 aa5.22□□□□□ -1.57
GTF3A-208ENST00000493903 SLC13A4Q9UKG4 626 aa5.22□□□□□ -1.57
GTF3A-208ENST00000493903 PCDHA6Q9UN73 950 aa5.22□□□□□ -1.57
GTF3A-208ENST00000493903 MED16Q9Y2X0 877 aa5.22□□□□□ -1.57
GTF3A-208ENST00000493903 RABGAP1Q9Y3P9 1069 aa5.22□□□□□ -1.57
GTF3A-208ENST00000493903 PCDHA1Q9Y5I3 950 aa5.22□□□□□ -1.57
GTF3A-208ENST00000493903 MYBBP1AQ9BQG0 1328 aaKnown RBP5.22□□□□□ -1.57
GTF3A-208ENST00000493903 NACADO15069 1562 aa5.21□□□□□ -1.57
GTF3A-208ENST00000493903 LGALS16A8MUM7 142 aa5.21□□□□□ -1.58
GTF3A-208ENST00000493903 EYA2O00167 538 aa5.21□□□□□ -1.58
GTF3A-208ENST00000493903 ACKR2O00590 384 aa5.21□□□□□ -1.58
GTF3A-208ENST00000493903 MBD4O95243 580 aa5.21□□□□□ -1.58
GTF3A-208ENST00000493903 MPOP05164 745 aa5.21□□□□□ -1.58
GTF3A-208ENST00000493903 PRDX5P30044 214 aa5.21□□□□□ -1.58
GTF3A-208ENST00000493903 ADSLP30566 484 aaPredicted RBP5.21□□□□□ -1.58
GTF3A-208ENST00000493903 ITGA8P53708 1063 aa5.21□□□□□ -1.58
GTF3A-208ENST00000493903 PER3P56645 1201 aa5.21□□□□□ -1.58
GTF3A-208ENST00000493903 WNT3AP56704 352 aa5.21□□□□□ -1.58
GTF3A-208ENST00000493903 ANTXR2P58335 489 aa5.21□□□□□ -1.58
GTF3A-208ENST00000493903 IL13RA1P78552 427 aa5.21□□□□□ -1.58
GTF3A-208ENST00000493903 ATP8B2P98198 1209 aa5.21□□□□□ -1.58
GTF3A-208ENST00000493903 EFR3AQ14156 821 aa5.21□□□□□ -1.58
GTF3A-208ENST00000493903 SPARCL1Q14515 664 aa5.21□□□□□ -1.58
GTF3A-208ENST00000493903 SLC44A4Q53GD3 710 aa5.21□□□□□ -1.58
GTF3A-208ENST00000493903 C3orf38Q5JPI3 329 aa5.21□□□□□ -1.58
GTF3A-208ENST00000493903 FBXO47Q5MNV8 452 aa5.21□□□□□ -1.58
GTF3A-208ENST00000493903 GRAMD4Q6IC98 578 aa5.21□□□□□ -1.58
GTF3A-208ENST00000493903 TANGO2Q6ICL3 276 aa5.21□□□□□ -1.58
GTF3A-208ENST00000493903 ABHD15Q6UXT9 468 aa5.21□□□□□ -1.58
GTF3A-208ENST00000493903 ATG4DQ86TL0 474 aaPredicted RBP5.21□□□□□ -1.58
GTF3A-208ENST00000493903 PQLC1Q8N2U9 271 aa5.21□□□□□ -1.58
GTF3A-208ENST00000493903 CASKIN2Q8WXE0 1202 aa5.21□□□□□ -1.58
GTF3A-208ENST00000493903 SNX22Q96L94 193 aa5.21□□□□□ -1.58
GTF3A-208ENST00000493903 WDR92Q96MX6 357 aa5.21□□□□□ -1.58
GTF3A-208ENST00000493903 TMEM209Q96SK2 561 aa5.21□□□□□ -1.58
GTF3A-208ENST00000493903 SLC26A6Q9BXS9 759 aa5.21□□□□□ -1.58
GTF3A-208ENST00000493903 ADAM7Q9H2U9 754 aa5.21□□□□□ -1.58
GTF3A-208ENST00000493903 WASH6PQ9NQA3 447 aa5.21□□□□□ -1.58
GTF3A-208ENST00000493903 NECTIN3Q9NQS3 549 aa5.21□□□□□ -1.58
GTF3A-208ENST00000493903 LANCL2Q9NS86 450 aa5.21□□□□□ -1.58
GTF3A-208ENST00000493903 ARHGAP20Q9P2F6 1191 aa5.21□□□□□ -1.58
GTF3A-208ENST00000493903 FBXO10Q9UK96 956 aa5.21□□□□□ -1.58
GTF3A-208ENST00000493903 ZDHHC8Q9ULC8 765 aa5.21□□□□□ -1.58
GTF3A-208ENST00000493903 CTNND2Q9UQB3 1225 aa5.21□□□□□ -1.58
GTF3A-208ENST00000493903 TBC1D4O60343 1298 aa5.2□□□□□ -1.58
GTF3A-208ENST00000493903 PRAMEF4O60810 478 aa5.2□□□□□ -1.58
GTF3A-208ENST00000493903 BAIAP3O94812 1187 aa5.2□□□□□ -1.58
GTF3A-208ENST00000493903 GASTP01350 101 aa5.2□□□□□ -1.58
GTF3A-208ENST00000493903 MT-ND5P03915 603 aa5.2□□□□□ -1.58
GTF3A-208ENST00000493903 AMY1AP04745 511 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms