RNA–Protein interactions for RNA: ENST00000493796.5

CD46-217, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-217ENST00000493796 PROKR1Q8TCW9 393 aa4.99□□□□□ -1.61
CD46-217ENST00000493796 GPATCH3Q96I76 525 aa4.99□□□□□ -1.61
CD46-217ENST00000493796 MLST8Q9BVC4 326 aa4.99□□□□□ -1.61
CD46-217ENST00000493796 SLC13A1Q9BZW2 595 aa4.99□□□□□ -1.61
CD46-217ENST00000493796 AKIP1Q9NQ31 210 aa4.99□□□□□ -1.61
CD46-217ENST00000493796 MRFAP1Q9Y605 127 aa4.99□□□□□ -1.61
CD46-217ENST00000493796 PEG3Q9GZU2 1588 aa4.99□□□□□ -1.61
CD46-217ENST00000493796 MYBBP1AQ9BQG0 1328 aaKnown RBP4.98□□□□□ -1.61
CD46-217ENST00000493796 ANKRD62A6NC57 917 aa4.98□□□□□ -1.61
CD46-217ENST00000493796 TMEM200CA6NKL6 621 aa4.98□□□□□ -1.61
CD46-217ENST00000493796 ABHD16AO95870 558 aa4.98□□□□□ -1.61
CD46-217ENST00000493796 POMCP01189 267 aa4.98□□□□□ -1.61
CD46-217ENST00000493796 DDCP20711 480 aa4.98□□□□□ -1.61
CD46-217ENST00000493796 DPTQ07507 201 aa4.98□□□□□ -1.61
CD46-217ENST00000493796 BEAN1Q3B7T3 259 aa4.98□□□□□ -1.61
CD46-217ENST00000493796 TIGD2Q4W5G0 525 aa4.98□□□□□ -1.61
CD46-217ENST00000493796 LY6G5CQ5SRR4 150 aa4.98□□□□□ -1.61
CD46-217ENST00000493796 ZNF529Q6P280 563 aa4.98□□□□□ -1.61
CD46-217ENST00000493796 KCNV1Q6PIU1 500 aa4.98□□□□□ -1.61
CD46-217ENST00000493796 MED25Q71SY5 747 aa4.98□□□□□ -1.61
CD46-217ENST00000493796 MIGA2Q7L4E1 593 aa4.98□□□□□ -1.61
CD46-217ENST00000493796 LDLRAD3Q86YD5 345 aa4.98□□□□□ -1.61
CD46-217ENST00000493796 RHOT2Q8IXI1 618 aa4.98□□□□□ -1.61
CD46-217ENST00000493796 RHOT1Q8IXI2 618 aa4.98□□□□□ -1.61
CD46-217ENST00000493796 PHACTR3Q96KR7 559 aa4.98□□□□□ -1.61
CD46-217ENST00000493796 MYOCQ99972 504 aa4.98□□□□□ -1.61
CD46-217ENST00000493796 HOMER2Q9NSB8 354 aa4.98□□□□□ -1.61
CD46-217ENST00000493796 DKK2Q9UBU2 259 aa4.98□□□□□ -1.61
CD46-217ENST00000493796 RUVBL1Q9Y265 456 aaKnown RBP4.98□□□□□ -1.61
CD46-217ENST00000493796 USP15Q9Y4E8 981 aaPredicted RBP4.98□□□□□ -1.61
CD46-217ENST00000493796 IPPQ9Y573 584 aa4.98□□□□□ -1.61
CD46-217ENST00000493796 BAZ1AQ9NRL2 1556 aaPredicted RBP4.97□□□□□ -1.61
CD46-217ENST00000493796 CENPVL1A0A0U1RR11 272 aa4.97□□□□□ -1.61
CD46-217ENST00000493796 HTRA2O43464 458 aaPredicted RBP4.97□□□□□ -1.61
CD46-217ENST00000493796 NDUFA10O95299 355 aa4.97□□□□□ -1.61
CD46-217ENST00000493796 KRT4P19013 534 aa4.97□□□□□ -1.61
CD46-217ENST00000493796 EDNRBP24530 442 aa4.97□□□□□ -1.61
CD46-217ENST00000493796 TGFB2P61812 414 aa4.97□□□□□ -1.61
CD46-217ENST00000493796 KIF23Q02241 960 aaPredicted RBP4.97□□□□□ -1.61
CD46-217ENST00000493796 TARDBPQ13148 414 aaKnown RBP eCLIP4.97□□□□□ -1.61
CD46-217ENST00000493796 ODF1Q14990 250 aa4.97□□□□□ -1.61
CD46-217ENST00000493796 UBXN2BQ14CS0 331 aa4.97□□□□□ -1.61
CD46-217ENST00000493796 EFCAB2Q5VUJ9 269 aa4.97□□□□□ -1.61
CD46-217ENST00000493796 PNMA8AQ86V59 439 aaPredicted RBP4.97□□□□□ -1.61
CD46-217ENST00000493796 RPUSD2Q8IZ73 545 aaKnown RBP4.97□□□□□ -1.61
CD46-217ENST00000493796 FAM177A1Q8N128 213 aaPredicted RBP4.97□□□□□ -1.61
CD46-217ENST00000493796 HDAC10Q969S8 669 aa4.97□□□□□ -1.61
CD46-217ENST00000493796 COA7Q96BR5 231 aa4.97□□□□□ -1.61
CD46-217ENST00000493796 SMAD5Q99717 465 aaKnown RBP4.97□□□□□ -1.61
CD46-217ENST00000493796 PRRX2Q99811 253 aa4.97□□□□□ -1.61
CD46-217ENST00000493796 KLHL11Q9NVR0 708 aa4.97□□□□□ -1.61
CD46-217ENST00000493796 FBXO34Q9NWN3 711 aa4.97□□□□□ -1.61
CD46-217ENST00000493796 LIMCH1Q9UPQ0 1083 aa4.97□□□□□ -1.61
CD46-217ENST00000493796 ATP11BQ9Y2G3 1177 aa4.97□□□□□ -1.61
CD46-217ENST00000493796 NOP58Q9Y2X3 529 aaKnown RBP4.97□□□□□ -1.61
CD46-217ENST00000493796 SPEF1Q9Y4P9 236 aa4.97□□□□□ -1.61
CD46-217ENST00000493796 PCDHA13Q9Y5I0 950 aa4.97□□□□□ -1.61
CD46-217ENST00000493796 FPGT-TNNI3KV9GXZ4 949 aa4.97□□□□□ -1.61
CD46-217ENST00000493796 CCDC154A6NI56 674 aa4.96□□□□□ -1.62
CD46-217ENST00000493796 MARCH11A6NNE9 402 aa4.96□□□□□ -1.62
CD46-217ENST00000493796 SGTAO43765 313 aa4.96□□□□□ -1.62
CD46-217ENST00000493796 LPXNO60711 386 aa4.96□□□□□ -1.62
CD46-217ENST00000493796 IBSPP21815 317 aaPredicted RBP4.96□□□□□ -1.62
CD46-217ENST00000493796 SLC6A2P23975 617 aa4.96□□□□□ -1.62
CD46-217ENST00000493796 BMPR1AP36894 532 aa4.96□□□□□ -1.62
CD46-217ENST00000493796 INHBCP55103 352 aa4.96□□□□□ -1.62
CD46-217ENST00000493796 CTXN1P60606 82 aa4.96□□□□□ -1.62
CD46-217ENST00000493796 CDC42EP1Q00587 391 aa4.96□□□□□ -1.62
CD46-217ENST00000493796 PTPAQ15257 358 aa4.96□□□□□ -1.62
CD46-217ENST00000493796 BRDTQ58F21 947 aaPredicted RBP4.96□□□□□ -1.62
CD46-217ENST00000493796 DACT2Q5SW24 774 aa4.96□□□□□ -1.62
CD46-217ENST00000493796 TSHZ3Q63HK5 1081 aa4.96□□□□□ -1.62
CD46-217ENST00000493796 UBE3BQ7Z3V4 1068 aa4.96□□□□□ -1.62
CD46-217ENST00000493796 CPEB3Q8NE35 698 aaKnown RBP4.96□□□□□ -1.62
CD46-217ENST00000493796 OR56A1Q8NGH5 318 aa4.96□□□□□ -1.62
CD46-217ENST00000493796 RAB24Q969Q5 203 aa4.96□□□□□ -1.62
CD46-217ENST00000493796 CHFRQ96EP1 664 aa4.96□□□□□ -1.62
CD46-217ENST00000493796 REXO4Q9GZR2 422 aaKnown RBP4.96□□□□□ -1.62
CD46-217ENST00000493796 TDP1Q9NUW8 608 aa4.96□□□□□ -1.62
CD46-217ENST00000493796 SERPINB13Q9UIV8 391 aa4.96□□□□□ -1.62
CD46-217ENST00000493796 NCAPD3P42695 1498 aa4.95□□□□□ -1.62
CD46-217ENST00000493796 NESP48681 1621 aa4.95□□□□□ -1.62
CD46-217ENST00000493796 TMEM191CA6NGB0 347 aa4.95□□□□□ -1.62
CD46-217ENST00000493796 CFIP05156 583 aa4.95□□□□□ -1.62
CD46-217ENST00000493796 HLA-DOAP06340 250 aa4.95□□□□□ -1.62
CD46-217ENST00000493796 ALAS1P13196 640 aa4.95□□□□□ -1.62
CD46-217ENST00000493796 GCSHP23434 173 aa4.95□□□□□ -1.62
CD46-217ENST00000493796 CCND1P24385 295 aa4.95□□□□□ -1.62
CD46-217ENST00000493796 ADKP55263 362 aaKnown RBP4.95□□□□□ -1.62
CD46-217ENST00000493796 IL10RAQ13651 578 aa4.95□□□□□ -1.62
CD46-217ENST00000493796 C3orf36Q3SXR2 165 aa4.95□□□□□ -1.62
CD46-217ENST00000493796 MRGPRGQ86SM5 289 aa4.95□□□□□ -1.62
CD46-217ENST00000493796 RSPH3Q86UC2 560 aa4.95□□□□□ -1.62
CD46-217ENST00000493796 ARHGEF19Q8IW93 802 aa4.95□□□□□ -1.62
CD46-217ENST00000493796 DCBLD1Q8N8Z6 715 aa4.95□□□□□ -1.62
CD46-217ENST00000493796 TMX3Q96JJ7 454 aa4.95□□□□□ -1.62
CD46-217ENST00000493796 ADAM2Q99965 735 aa4.95□□□□□ -1.62
CD46-217ENST00000493796 C11orf54Q9H0W9 315 aaPredicted RBP4.95□□□□□ -1.62
CD46-217ENST00000493796 IKZF4Q9H2S9 585 aa4.95□□□□□ -1.62
CD46-217ENST00000493796 MAP3K2Q9Y2U5 619 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms