RNA–Protein interactions for RNA: ENST00000492741.5

PSPC1-204, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 1,709 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-204ENST00000492741 NUP58Q9BVL2 599 aa23.82■■□□□ 1.4
PSPC1-204ENST00000492741 TSPYL2Q9H2G4 693 aaPredicted RBP23.82■■□□□ 1.4
PSPC1-204ENST00000492741 C1orf112Q9NSG2 853 aa23.82■■□□□ 1.4
PSPC1-204ENST00000492741 IMPACTQ9P2X3 320 aa23.82■■□□□ 1.4
PSPC1-204ENST00000492741 PMM2O15305 246 aa23.81■■□□□ 1.4
PSPC1-204ENST00000492741 CLSTN1O94985 981 aa23.81■■□□□ 1.4
PSPC1-204ENST00000492741 ZACNQ401N2 412 aa23.81■■□□□ 1.4
PSPC1-204ENST00000492741 TDRD10Q5VZ19 366 aaKnown RBP23.81■■□□□ 1.4
PSPC1-204ENST00000492741 FAM43BQ6ZT52 329 aaPredicted RBP23.81■■□□□ 1.4
PSPC1-204ENST00000492741 MRPL10Q7Z7H8 261 aaKnown RBP23.81■■□□□ 1.4
PSPC1-204ENST00000492741 ECHDC2Q86YB7 292 aa23.81■■□□□ 1.4
PSPC1-204ENST00000492741 TMEM199Q8N511 208 aa23.81■■□□□ 1.4
PSPC1-204ENST00000492741 EHBP1Q8NDI1 1231 aa23.81■■□□□ 1.4
PSPC1-204ENST00000492741 MKI67P46013 3256 aaKnown RBP23.81■■□□□ 1.4
PSPC1-204ENST00000492741 CCDC85CA6NKD9 419 aa23.81■■□□□ 1.4
PSPC1-204ENST00000492741 PIK3CAP42336 1068 aa23.81■■□□□ 1.4
PSPC1-204ENST00000492741 TRIM14Q14142 442 aa23.81■■□□□ 1.4
PSPC1-204ENST00000492741 TRAPPC11Q7Z392 1133 aa23.81■■□□□ 1.4
PSPC1-204ENST00000492741 NT5DC4Q86YG4 428 aa23.81■■□□□ 1.4
PSPC1-204ENST00000492741 TAS1R2Q8TE23 839 aa23.81■■□□□ 1.4
PSPC1-204ENST00000492741 RPS6KC1Q96S38 1066 aa23.81■■□□□ 1.4
PSPC1-204ENST00000492741 INTS2Q9H0H0 1204 aaKnown RBP23.81■■□□□ 1.4
PSPC1-204ENST00000492741 RNF19AQ9NV58 838 aa23.81■■□□□ 1.4
PSPC1-204ENST00000492741 RAB20Q9NX57 234 aa23.81■■□□□ 1.4
PSPC1-204ENST00000492741 CNTN3Q9P232 1028 aa23.81■■□□□ 1.4
PSPC1-204ENST00000492741 GIT1Q9Y2X7 761 aa23.81■■□□□ 1.4
PSPC1-204ENST00000492741 R3HCC1Q9Y3T6 440 aaKnown RBP23.81■■□□□ 1.4
PSPC1-204ENST00000492741 C2CD2Q9Y426 696 aa23.81■■□□□ 1.4
PSPC1-204ENST00000492741 MEIS3P2A8K0S8 358 aa23.8■■□□□ 1.4
PSPC1-204ENST00000492741 C9IYK1 514 aa23.8■■□□□ 1.4
PSPC1-204ENST00000492741 ACTN1P12814 892 aa23.8■■□□□ 1.4
PSPC1-204ENST00000492741 ITGB8P26012 769 aa23.8■■□□□ 1.4
PSPC1-204ENST00000492741 TRPC3Q13507 836 aa23.8■■□□□ 1.4
PSPC1-204ENST00000492741 GLRA4Q5JXX5 417 aa23.8■■□□□ 1.4
PSPC1-204ENST00000492741 ALKAL1Q6UXT8 129 aa23.8■■□□□ 1.4
PSPC1-204ENST00000492741 LINC01599Q8WXQ3 324 aa23.8■■□□□ 1.4
PSPC1-204ENST00000492741 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.8■■□□□ 1.41e-6■■■■■ 81.9
PSPC1-204ENST00000492741 DERAQ9Y315 318 aa23.8■■□□□ 1.4
PSPC1-204ENST00000492741 TANC1Q9C0D5 1861 aa23.79■■□□□ 1.4
PSPC1-204ENST00000492741 ENPP3O14638 875 aa23.79■■□□□ 1.4
PSPC1-204ENST00000492741 EPC2Q52LR7 807 aa23.79■■□□□ 1.4
PSPC1-204ENST00000492741 MFSD5Q6N075 450 aa23.79■■□□□ 1.4
PSPC1-204ENST00000492741 TRIM65Q6PJ69 517 aa23.79■■□□□ 1.4
PSPC1-204ENST00000492741 C15orf39Q6ZRI6 1047 aa23.79■■□□□ 1.4
PSPC1-204ENST00000492741 C7orf61Q8IZ16 206 aa23.79■■□□□ 1.4
PSPC1-204ENST00000492741 HTATIP2Q9BUP3 242 aa23.79■■□□□ 1.4
PSPC1-204ENST00000492741 CXCL16Q9H2A7 254 aa23.79■■□□□ 1.4
PSPC1-204ENST00000492741 RSAD1Q9HA92 442 aa23.79■■□□□ 1.4
PSPC1-204ENST00000492741 UBN1Q9NPG3 1134 aa23.79■■□□□ 1.4
PSPC1-204ENST00000492741 COQ4Q9Y3A0 265 aa23.79■■□□□ 1.4
PSPC1-204ENST00000492741 CITO14578 2027 aa23.79■■□□□ 1.4
PSPC1-204ENST00000492741 SCN5AQ14524 2016 aa23.79■■□□□ 1.4
PSPC1-204ENST00000492741 SMIM28A0A1B0GU29 152 aa23.79■■□□□ 1.4
PSPC1-204ENST00000492741 EOMESO95936 686 aa23.79■■□□□ 1.4
PSPC1-204ENST00000492741 HLA-DRAP01903 254 aa23.79■■□□□ 1.4
PSPC1-204ENST00000492741 KRT19P08727 400 aa23.79■■□□□ 1.4
PSPC1-204ENST00000492741 CSF2RAP15509 400 aa23.79■■□□□ 1.4
PSPC1-204ENST00000492741 MLH1P40692 756 aa23.79■■□□□ 1.4
PSPC1-204ENST00000492741 LRMPQ12912 555 aa23.79■■□□□ 1.4
PSPC1-204ENST00000492741 IKBKEQ14164 716 aa23.79■■□□□ 1.4
PSPC1-204ENST00000492741 WDR44Q5JSH3 913 aa23.79■■□□□ 1.4
PSPC1-204ENST00000492741 AGMOQ6ZNB7 445 aa23.79■■□□□ 1.4
PSPC1-204ENST00000492741 CCDC186Q7Z3E2 898 aa23.79■■□□□ 1.4
PSPC1-204ENST00000492741 CACNA2D4Q7Z3S7 1137 aa23.79■■□□□ 1.4
PSPC1-204ENST00000492741 CCDC150Q8NCX0 1101 aa23.79■■□□□ 1.4
PSPC1-204ENST00000492741 BEST2Q8NFU1 509 aa23.79■■□□□ 1.4
PSPC1-204ENST00000492741 ZFP42Q96MM3 310 aa23.79■■□□□ 1.4
PSPC1-204ENST00000492741 ZMAT2Q96NC0 199 aaKnown RBP23.79■■□□□ 1.4
PSPC1-204ENST00000492741 GAD1Q99259 594 aa23.79■■□□□ 1.4
PSPC1-204ENST00000492741 PLCB1Q9NQ66 1216 aa23.79■■□□□ 1.4
PSPC1-204ENST00000492741 XPOTO43592 962 aaKnown RBP23.78■■□□□ 1.4
PSPC1-204ENST00000492741 ATF7P17544 494 aaPredicted RBP23.78■■□□□ 1.4
PSPC1-204ENST00000492741 CASP14P31944 242 aa23.78■■□□□ 1.4
PSPC1-204ENST00000492741 APBA1Q02410 837 aa23.78■■□□□ 1.4
PSPC1-204ENST00000492741 NCOA4Q13772 614 aa23.78■■□□□ 1.4
PSPC1-204ENST00000492741 CNKSR3Q6P9H4 555 aa23.78■■□□□ 1.4
PSPC1-204ENST00000492741 RPUSD2Q8IZ73 545 aaKnown RBP23.78■■□□□ 1.4
PSPC1-204ENST00000492741 SEMA4DQ92854 862 aa23.78■■□□□ 1.4
PSPC1-204ENST00000492741 IQCDQ96DY2 449 aa23.78■■□□□ 1.4
PSPC1-204ENST00000492741 TSPAN18Q96SJ8 248 aa23.78■■□□□ 1.4
PSPC1-204ENST00000492741 IMPG2Q9BZV3 1241 aa23.78■■□□□ 1.4
PSPC1-204ENST00000492741 DPP3Q9NY33 737 aa23.78■■□□□ 1.4
PSPC1-204ENST00000492741 ARL5CA6NH57 179 aa23.77■■□□□ 1.4
PSPC1-204ENST00000492741 GYPCP04921 128 aa23.77■■□□□ 1.4
PSPC1-204ENST00000492741 KCNE1P15382 129 aa23.77■■□□□ 1.4
PSPC1-204ENST00000492741 POLR2FP61218 127 aaKnown RBP23.77■■□□□ 1.4
PSPC1-204ENST00000492741 FAM189BP81408 668 aa23.77■■□□□ 1.4
PSPC1-204ENST00000492741 TBX2Q13207 712 aaPredicted RBP23.77■■□□□ 1.4
PSPC1-204ENST00000492741 TCTN1Q2MV58 587 aa23.77■■□□□ 1.4
PSPC1-204ENST00000492741 XKR4Q5GH76 650 aa23.77■■□□□ 1.4
PSPC1-204ENST00000492741 KLHDC7AQ5VTJ3 777 aa23.77■■□□□ 1.4
PSPC1-204ENST00000492741 ZNF397Q8NF99 534 aaPredicted RBP23.77■■□□□ 1.4
PSPC1-204ENST00000492741 LMO3Q8TAP4 145 aa23.77■■□□□ 1.4
PSPC1-204ENST00000492741 LRFN2Q9ULH4 789 aa23.77■■□□□ 1.4
PSPC1-204ENST00000492741 UBQLN1Q9UMX0 589 aaKnown RBP23.77■■□□□ 1.4
PSPC1-204ENST00000492741 LUC7L2Q9Y383 392 aaKnown RBP23.77■■□□□ 1.4
PSPC1-204ENST00000492741 PCDHB7Q9Y5E2 793 aa23.77■■□□□ 1.4
PSPC1-204ENST00000492741 AKR1B15C9JRZ8 316 aaPredicted RBP23.76■■□□□ 1.39
PSPC1-204ENST00000492741 EPHB6O15197 1021 aa23.76■■□□□ 1.39
PSPC1-204ENST00000492741 EVI5O60447 810 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms