RNA–Protein interactions for RNA: ENST00000492545.1

CTDSP1-211, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-211ENST00000492545 PIGRP01833 764 aa25.86■■□□□ 1.73
CTDSP1-211ENST00000492545 WEE2P0C1S8 567 aa25.86■■□□□ 1.73
CTDSP1-211ENST00000492545 FGFR3P22607 806 aa25.86■■□□□ 1.73
CTDSP1-211ENST00000492545 CEBPZQ03701 1054 aaKnown RBP25.86■■□□□ 1.73
CTDSP1-211ENST00000492545 PTPN21Q16825 1174 aa25.86■■□□□ 1.73
CTDSP1-211ENST00000492545 RRAGBQ5VZM2 374 aa25.86■■□□□ 1.73
CTDSP1-211ENST00000492545 TRIM67Q6ZTA4 783 aa25.86■■□□□ 1.73
CTDSP1-211ENST00000492545 CCDC149Q6ZUS6 474 aa25.86■■□□□ 1.73
CTDSP1-211ENST00000492545 USP49Q70CQ1 688 aa25.86■■□□□ 1.73
CTDSP1-211ENST00000492545 OTOP3Q7RTS5 596 aa25.86■■□□□ 1.73
CTDSP1-211ENST00000492545 CEP57Q86XR8 500 aa25.86■■□□□ 1.73
CTDSP1-211ENST00000492545 PALB2Q86YC2 1186 aa25.86■■□□□ 1.73
CTDSP1-211ENST00000492545 TDRD5Q8NAT2 981 aaKnown RBP25.86■■□□□ 1.73
CTDSP1-211ENST00000492545 ACSF2Q96CM8 615 aaPredicted RBP25.86■■□□□ 1.73
CTDSP1-211ENST00000492545 USP28Q96RU2 1077 aa25.86■■□□□ 1.73
CTDSP1-211ENST00000492545 CLTAP09496 248 aa25.85■■□□□ 1.73
CTDSP1-211ENST00000492545 HARSP12081 509 aaKnown RBP25.85■■□□□ 1.73
CTDSP1-211ENST00000492545 MATR3P43243 847 aaKnown RBP eCLIP25.85■■□□□ 1.73
CTDSP1-211ENST00000492545 LIG4P49917 911 aa25.85■■□□□ 1.73
CTDSP1-211ENST00000492545 PSMD5Q16401 504 aa25.85■■□□□ 1.73
CTDSP1-211ENST00000492545 SPECC1Q5M775 1068 aa25.85■■□□□ 1.73
CTDSP1-211ENST00000492545 CCDC73Q6ZRK6 1079 aa25.85■■□□□ 1.73
CTDSP1-211ENST00000492545 BMP8AQ7Z5Y6 402 aa25.85■■□□□ 1.73
CTDSP1-211ENST00000492545 ZMAT2Q96NC0 199 aaKnown RBP25.85■■□□□ 1.73
CTDSP1-211ENST00000492545 TSPAN18Q96SJ8 248 aa25.85■■□□□ 1.73
CTDSP1-211ENST00000492545 ST6GALNAC4Q9H4F1 302 aa25.85■■□□□ 1.73
CTDSP1-211ENST00000492545 ZHX3Q9H4I2 956 aa25.85■■□□□ 1.73
CTDSP1-211ENST00000492545 C2CD4DB7Z1M9 353 aa25.84■■□□□ 1.73
CTDSP1-211ENST00000492545 K7ENM7 598 aa25.84■■□□□ 1.73
CTDSP1-211ENST00000492545 HNRNPDLO14979 420 aaKnown RBP25.84■■□□□ 1.73
CTDSP1-211ENST00000492545 NASPP49321 788 aaPredicted RBP25.84■■□□□ 1.73
CTDSP1-211ENST00000492545 GTF2BQ00403 316 aa25.84■■□□□ 1.73
CTDSP1-211ENST00000492545 SLC10A6Q3KNW5 377 aa25.84■■□□□ 1.73
CTDSP1-211ENST00000492545 PRSS55Q6UWB4 352 aaPredicted RBP25.84■■□□□ 1.73
CTDSP1-211ENST00000492545 SV2BQ7L1I2 683 aa25.84■■□□□ 1.73
CTDSP1-211ENST00000492545 KREMEN2Q8NCW0 462 aa25.84■■□□□ 1.73
CTDSP1-211ENST00000492545 STAMQ92783 540 aa25.84■■□□□ 1.73
CTDSP1-211ENST00000492545 MFSD14AQ96MC6 490 aa25.84■■□□□ 1.73
CTDSP1-211ENST00000492545 ZNF396Q96N95 335 aaPredicted RBP25.84■■□□□ 1.73
CTDSP1-211ENST00000492545 CLIC6Q96NY7 704 aa25.84■■□□□ 1.73
CTDSP1-211ENST00000492545 CLSTN3Q9BQT9 956 aa25.84■■□□□ 1.73
CTDSP1-211ENST00000492545 MYH11P35749 1972 aa25.84■■□□□ 1.73
CTDSP1-211ENST00000492545 HSP90AA1P07900 732 aaKnown RBP25.83■■□□□ 1.73
CTDSP1-211ENST00000492545 RPL17P18621 184 aaKnown RBP25.83■■□□□ 1.73
CTDSP1-211ENST00000492545 ANKS3Q6ZW76 656 aa25.83■■□□□ 1.73
CTDSP1-211ENST00000492545 RTL10Q7L3V2 364 aa25.83■■□□□ 1.73
CTDSP1-211ENST00000492545 UBALD2Q8IYN6 164 aa25.83■■□□□ 1.73
CTDSP1-211ENST00000492545 SEL1LQ9UBV2 794 aa25.83■■□□□ 1.73
CTDSP1-211ENST00000492545 BACE2Q9Y5Z0 518 aa25.83■■□□□ 1.73
CTDSP1-211ENST00000492545 PODXLO00592 558 aa25.82■■□□□ 1.72
CTDSP1-211ENST00000492545 SP100P23497 879 aaPredicted RBP25.82■■□□□ 1.72
CTDSP1-211ENST00000492545 SOX4Q06945 474 aaPredicted RBP25.82■■□□□ 1.72
CTDSP1-211ENST00000492545 SIGLEC14Q08ET2 396 aa25.82■■□□□ 1.72
CTDSP1-211ENST00000492545 CD300LGQ6UXG3 332 aa25.82■■□□□ 1.72
CTDSP1-211ENST00000492545 FIZ1Q96SL8 496 aa25.82■■□□□ 1.72
CTDSP1-211ENST00000492545 GOLGA2P5Q9HBQ8 144 aa25.82■■□□□ 1.72
CTDSP1-211ENST00000492545 WDR6Q9NNW5 1121 aaKnown RBP25.82■■□□□ 1.72
CTDSP1-211ENST00000492545 MTRRQ9UBK8 725 aa25.82■■□□□ 1.72
CTDSP1-211ENST00000492545 SORCS3Q9UPU3 1222 aa25.82■■□□□ 1.72
CTDSP1-211ENST00000492545 GTF3C3Q9Y5Q9 886 aa25.82■■□□□ 1.72
CTDSP1-211ENST00000492545 TMEM221A6NGB7 291 aa25.81■■□□□ 1.72
CTDSP1-211ENST00000492545 M0R296 226 aa25.81■■□□□ 1.72
CTDSP1-211ENST00000492545 ZMYND10O75800 440 aa25.81■■□□□ 1.72
CTDSP1-211ENST00000492545 SPATA31D3P0C874 917 aa25.81■■□□□ 1.72
CTDSP1-211ENST00000492545 MTMR3Q13615 1198 aa25.81■■□□□ 1.72
CTDSP1-211ENST00000492545 RAB33AQ14088 237 aa25.81■■□□□ 1.72
CTDSP1-211ENST00000492545 STK38Q15208 465 aa25.81■■□□□ 1.72
CTDSP1-211ENST00000492545 SPATA31D4Q6ZUB0 917 aa25.81■■□□□ 1.72
CTDSP1-211ENST00000492545 MAP4K3Q8IVH8 894 aa25.81■■□□□ 1.72
CTDSP1-211ENST00000492545 LINC00301Q8NCQ3 95 aa25.81■■□□□ 1.72
CTDSP1-211ENST00000492545 SMG7Q92540 1137 aaKnown RBP25.81■■□□□ 1.72
CTDSP1-211ENST00000492545 HVCN1Q96D96 273 aa25.81■■□□□ 1.72
CTDSP1-211ENST00000492545 PRKD2Q9BZL6 878 aa25.81■■□□□ 1.72
CTDSP1-211ENST00000492545 A0A0B4J269 797 aa25.8■■□□□ 1.72
CTDSP1-211ENST00000492545 TTC26A0AVF1 554 aa25.8■■□□□ 1.72
CTDSP1-211ENST00000492545 SYN3O14994 580 aa25.8■■□□□ 1.72
CTDSP1-211ENST00000492545 OGTO15294 1046 aa25.8■■□□□ 1.72
CTDSP1-211ENST00000492545 PPP6R2O75170 966 aa25.8■■□□□ 1.72
CTDSP1-211ENST00000492545 RFPL2O75678 378 aa25.8■■□□□ 1.72
CTDSP1-211ENST00000492545 HNRNPA1P09651 372 aaKnown RBP eCLIP25.8■■□□□ 1.72
CTDSP1-211ENST00000492545 GAP43P17677 238 aa25.8■■□□□ 1.72
CTDSP1-211ENST00000492545 LIN9Q5TKA1 542 aa25.8■■□□□ 1.72
CTDSP1-211ENST00000492545 SLFN12LQ6IEE8 588 aa25.8■■□□□ 1.72
CTDSP1-211ENST00000492545 HFE2Q6ZVN8 426 aa25.8■■□□□ 1.72
CTDSP1-211ENST00000492545 GLYCTKQ8IVS8 523 aa25.8■■□□□ 1.72
CTDSP1-211ENST00000492545 CD302Q8IX05 232 aa25.8■■□□□ 1.72
CTDSP1-211ENST00000492545 C3orf58Q8NDZ4 430 aa25.8■■□□□ 1.72
CTDSP1-211ENST00000492545 DDX12PQ92771 950 aa25.8■■□□□ 1.72
CTDSP1-211ENST00000492545 HAPLN2Q9GZV7 340 aa25.8■■□□□ 1.72
CTDSP1-211ENST00000492545 KCNH6Q9H252 994 aa25.8■■□□□ 1.72
CTDSP1-211ENST00000492545 PIDD1Q9HB75 910 aa25.8■■□□□ 1.72
CTDSP1-211ENST00000492545 LIMD1Q9UGP4 676 aa25.8■■□□□ 1.72
CTDSP1-211ENST00000492545 FBXW11Q9UKB1 542 aa25.8■■□□□ 1.72
CTDSP1-211ENST00000492545 NUB1Q9Y5A7 615 aa25.8■■□□□ 1.72
CTDSP1-211ENST00000492545 TECTAO75443 2155 aa25.8■■□□□ 1.72
CTDSP1-211ENST00000492545 SPTLC2O15270 562 aa25.79■■□□□ 1.72
CTDSP1-211ENST00000492545 MEFVO15553 781 aaPredicted RBP25.79■■□□□ 1.72
CTDSP1-211ENST00000492545 XPOTO43592 962 aaKnown RBP25.79■■□□□ 1.72
CTDSP1-211ENST00000492545 CXCL8P10145 99 aa25.79■■□□□ 1.72
CTDSP1-211ENST00000492545 CYP3A5P20815 502 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms