RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 TANGO6Q9C0B7 1094 aa10.29□□□□□ -0.76
VPS8-225ENST00000492449 SENP6Q9GZR1 1112 aaPredicted RBP10.29□□□□□ -0.76
VPS8-225ENST00000492449 RNF41Q9H4P4 317 aaPredicted RBP10.29□□□□□ -0.76
VPS8-225ENST00000492449 SLCO1B3Q9NPD5 702 aa10.29□□□□□ -0.76
VPS8-225ENST00000492449 DDX18Q9NVP1 670 aaKnown RBP10.29□□□□□ -0.76
VPS8-225ENST00000492449 STX8Q9UNK0 236 aa10.29□□□□□ -0.76
VPS8-225ENST00000492449 SMG5Q9UPR3 1016 aaKnown RBP10.29□□□□□ -0.76
VPS8-225ENST00000492449 NAALADL1Q9UQQ1 740 aa10.29□□□□□ -0.76
VPS8-225ENST00000492449 DUOX1Q9NRD9 1551 aa10.29□□□□□ -0.76
VPS8-225ENST00000492449 DEPDC1Q5TB30 811 aa10.29□□□□□ -0.76
VPS8-225ENST00000492449 CABP7Q86V35 215 aa10.29□□□□□ -0.76
VPS8-225ENST00000492449 RASSF3Q86WH2 238 aa10.29□□□□□ -0.76
VPS8-225ENST00000492449 TRIM50Q86XT4 487 aa10.29□□□□□ -0.76
VPS8-225ENST00000492449 RELL1Q8IUW5 271 aa10.29□□□□□ -0.76
VPS8-225ENST00000492449 SRRM1Q8IYB3 904 aaKnown RBP10.29□□□□□ -0.76
VPS8-225ENST00000492449 SCYL3Q8IZE3 742 aa10.29□□□□□ -0.76
VPS8-225ENST00000492449 MARVELD2Q8N4S9 558 aa10.29□□□□□ -0.76
VPS8-225ENST00000492449 METTL25Q8N6Q8 603 aa10.29□□□□□ -0.76
VPS8-225ENST00000492449 PLBD2Q8NHP8 589 aa10.29□□□□□ -0.76
VPS8-225ENST00000492449 ZFP28Q8NHY6 868 aa10.29□□□□□ -0.76
VPS8-225ENST00000492449 IP6K1Q92551 441 aa10.29□□□□□ -0.76
VPS8-225ENST00000492449 ZKSCAN3Q9BRR0 538 aa10.29□□□□□ -0.76
VPS8-225ENST00000492449 TRAIPQ9BWF2 469 aa10.29□□□□□ -0.76
VPS8-225ENST00000492449 OSBPL8Q9BZF1 889 aa10.29□□□□□ -0.76
VPS8-225ENST00000492449 UBAP1Q9NZ09 502 aa10.29□□□□□ -0.76
VPS8-225ENST00000492449 SCHIP1Q9P0W5 487 aaPredicted RBP10.29□□□□□ -0.76
VPS8-225ENST00000492449 LRP5O75197 1615 aa10.29□□□□□ -0.76
VPS8-225ENST00000492449 KAT6BQ8WYB5 2073 aa10.29□□□□□ -0.76
VPS8-225ENST00000492449 SPDYE16A6NNV3 312 aaPredicted RBP10.29□□□□□ -0.76
VPS8-225ENST00000492449 PEX1O43933 1283 aa10.29□□□□□ -0.76
VPS8-225ENST00000492449 PDE6AP16499 860 aa10.29□□□□□ -0.76
VPS8-225ENST00000492449 PLCG2P16885 1265 aa10.29□□□□□ -0.76
VPS8-225ENST00000492449 CALML3P27482 149 aa10.29□□□□□ -0.76
VPS8-225ENST00000492449 FKBP3Q00688 224 aaKnown RBP10.29□□□□□ -0.76
VPS8-225ENST00000492449 PPIDQ08752 370 aaKnown RBP10.29□□□□□ -0.76
VPS8-225ENST00000492449 CAMK2BQ13554 666 aa10.29□□□□□ -0.76
VPS8-225ENST00000492449 STAT4Q14765 748 aa10.29□□□□□ -0.76
VPS8-225ENST00000492449 ZNF423Q2M1K9 1284 aa10.29□□□□□ -0.76
VPS8-225ENST00000492449 TMEM266Q2M3C6 531 aa10.29□□□□□ -0.76
VPS8-225ENST00000492449 NADK2Q4G0N4 442 aa10.29□□□□□ -0.76
VPS8-225ENST00000492449 C1orf141Q5JVX7 400 aa10.29□□□□□ -0.76
VPS8-225ENST00000492449 RAPH1Q70E73 1250 aa10.29□□□□□ -0.76
VPS8-225ENST00000492449 ERI1Q8IV48 349 aaKnown RBP10.29□□□□□ -0.76
VPS8-225ENST00000492449 ZC3H3Q8IXZ2 948 aaKnown RBP10.29□□□□□ -0.76
VPS8-225ENST00000492449 LSM14AQ8ND56 463 aaKnown RBP10.29□□□□□ -0.76
VPS8-225ENST00000492449 RFFLQ8WZ73 363 aa10.29□□□□□ -0.76
VPS8-225ENST00000492449 CASP10Q92851 521 aa10.29□□□□□ -0.76
VPS8-225ENST00000492449 ANKFY1Q9P2R3 1169 aa10.29□□□□□ -0.76
VPS8-225ENST00000492449 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.29□□□□□ -0.76
VPS8-225ENST00000492449 ANKRD63C9JTQ0 380 aa10.28□□□□□ -0.76
VPS8-225ENST00000492449 M0R2N6 131 aa10.28□□□□□ -0.76
VPS8-225ENST00000492449 DENRO43583 198 aaKnown RBP10.28□□□□□ -0.76
VPS8-225ENST00000492449 IDH1O75874 414 aaKnown RBP10.28□□□□□ -0.76
VPS8-225ENST00000492449 PLEKHA8P1O95397 391 aa10.28□□□□□ -0.76
VPS8-225ENST00000492449 ACSL3O95573 720 aa10.28□□□□□ -0.76
VPS8-225ENST00000492449 CLPTM1O96005 669 aa10.28□□□□□ -0.76
VPS8-225ENST00000492449 CD48P09326 243 aa10.28□□□□□ -0.76
VPS8-225ENST00000492449 TMEM253P0C7T8 217 aa10.28□□□□□ -0.76
VPS8-225ENST00000492449 SLC5A2P31639 672 aa10.28□□□□□ -0.76
VPS8-225ENST00000492449 COPB2P35606 906 aa10.28□□□□□ -0.76
VPS8-225ENST00000492449 PGM1P36871 562 aa10.28□□□□□ -0.76
VPS8-225ENST00000492449 CCT8P50990 548 aa10.28□□□□□ -0.76
VPS8-225ENST00000492449 HADHBP55084 474 aaKnown RBP10.28□□□□□ -0.76
VPS8-225ENST00000492449 PTPROQ16827 1216 aa10.28□□□□□ -0.76
VPS8-225ENST00000492449 CCDC137Q6PK04 289 aaKnown RBP10.28□□□□□ -0.76
VPS8-225ENST00000492449 KYAT3Q6YP21 454 aaKnown RBP10.28□□□□□ -0.76
VPS8-225ENST00000492449 CEP70Q8NHQ1 597 aa10.28□□□□□ -0.76
VPS8-225ENST00000492449 COX4I2Q96KJ9 171 aa10.28□□□□□ -0.76
VPS8-225ENST00000492449 SRPK1Q96SB4 655 aaKnown RBP10.28□□□□□ -0.76
VPS8-225ENST00000492449 CRNKL1Q9BZJ0 848 aaKnown RBP10.28□□□□□ -0.76
VPS8-225ENST00000492449 SH3GLB2Q9NR46 395 aa10.28□□□□□ -0.76
VPS8-225ENST00000492449 GRID1Q9ULK0 1009 aa10.28□□□□□ -0.76
VPS8-225ENST00000492449 PADI4Q9UM07 663 aa10.28□□□□□ -0.76
VPS8-225ENST00000492449 PLA2G4CQ9UP65 541 aa10.28□□□□□ -0.76
VPS8-225ENST00000492449 TTLL3Q9Y4R7 772 aa10.28□□□□□ -0.76
VPS8-225ENST00000492449 MYH11P35749 1972 aa10.28□□□□□ -0.76
VPS8-225ENST00000492449 GLI3P10071 1580 aa10.28□□□□□ -0.76
VPS8-225ENST00000492449 EIF3FO00303 357 aaPredicted RBP10.28□□□□□ -0.76
VPS8-225ENST00000492449 DDAH1O94760 285 aa10.28□□□□□ -0.76
VPS8-225ENST00000492449 CETPP11597 493 aa10.28□□□□□ -0.76
VPS8-225ENST00000492449 SCG2P13521 617 aa10.28□□□□□ -0.76
VPS8-225ENST00000492449 KRT13P13646 458 aa10.28□□□□□ -0.76
VPS8-225ENST00000492449 TATP17735 454 aaPredicted RBP10.28□□□□□ -0.76
VPS8-225ENST00000492449 PCSK6P29122 969 aa10.28□□□□□ -0.76
VPS8-225ENST00000492449 ARID5AQ03989 594 aa10.28□□□□□ -0.76
VPS8-225ENST00000492449 RASGRF1Q13972 1273 aa10.28□□□□□ -0.76
VPS8-225ENST00000492449 PFKFB3Q16875 520 aaPredicted RBP10.28□□□□□ -0.76
VPS8-225ENST00000492449 PLEKHG4Q58EX7 1191 aa10.28□□□□□ -0.76
VPS8-225ENST00000492449 C6orf163Q5TEZ5 329 aa10.28□□□□□ -0.76
VPS8-225ENST00000492449 RIPOR1Q6ZS17 1223 aa10.28□□□□□ -0.76
VPS8-225ENST00000492449 TRABD2AQ86V40 505 aa10.28□□□□□ -0.76
VPS8-225ENST00000492449 VPS36Q86VN1 386 aa10.28□□□□□ -0.76
VPS8-225ENST00000492449 TDRPQ86YL5 185 aa10.28□□□□□ -0.76
VPS8-225ENST00000492449 TMPRSS6Q8IU80 811 aa10.28□□□□□ -0.76
VPS8-225ENST00000492449 RIN3Q8TB24 985 aa10.28□□□□□ -0.76
VPS8-225ENST00000492449 CCDC110Q8TBZ0 833 aa10.28□□□□□ -0.76
VPS8-225ENST00000492449 DDI1Q8WTU0 396 aa10.28□□□□□ -0.76
VPS8-225ENST00000492449 SPOCK2Q92563 424 aa10.28□□□□□ -0.76
VPS8-225ENST00000492449 ZNF594Q96JF6 807 aaPredicted RBP10.28□□□□□ -0.76
VPS8-225ENST00000492449 PANX3Q96QZ0 392 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms