RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 RBM23Q86U06 439 aaKnown RBP4.8□□□□□ -1.64
TRA2B-215ENST00000492417 C17orf53Q8N3J3 647 aaPredicted RBP4.8□□□□□ -1.64
TRA2B-215ENST00000492417 OR8K1Q8NGG5 319 aa4.8□□□□□ -1.64
TRA2B-215ENST00000492417 FBF1Q8TES7 1133 aa4.8□□□□□ -1.64
TRA2B-215ENST00000492417 RNPC3Q96LT9 517 aaKnown RBP4.8□□□□□ -1.64
TRA2B-215ENST00000492417 ZFP42Q96MM3 310 aa4.8□□□□□ -1.64
TRA2B-215ENST00000492417 PGLYRP2Q96PD5 576 aa4.8□□□□□ -1.64
TRA2B-215ENST00000492417 NUP58Q9BVL2 599 aa4.8□□□□□ -1.64
TRA2B-215ENST00000492417 MIS12Q9H081 205 aa4.8□□□□□ -1.64
TRA2B-215ENST00000492417 XPNPEP1Q9NQW7 623 aa4.8□□□□□ -1.64
TRA2B-215ENST00000492417 PCDHB2Q9Y5E7 798 aa4.8□□□□□ -1.64
TRA2B-215ENST00000492417 MAFBQ9Y5Q3 323 aaPredicted RBP4.8□□□□□ -1.64
TRA2B-215ENST00000492417 ADAMTSL1Q8N6G6 1762 aa4.8□□□□□ -1.64
TRA2B-215ENST00000492417 M0R2N6 131 aa4.8□□□□□ -1.64
TRA2B-215ENST00000492417 PRRG1O14668 218 aa4.8□□□□□ -1.64
TRA2B-215ENST00000492417 DAPK3O43293 454 aa4.8□□□□□ -1.64
TRA2B-215ENST00000492417 HSF2BPO75031 334 aa4.8□□□□□ -1.64
TRA2B-215ENST00000492417 ANXA13P27216 316 aa4.8□□□□□ -1.64
TRA2B-215ENST00000492417 NSFP46459 744 aaKnown RBP4.8□□□□□ -1.64
TRA2B-215ENST00000492417 GJA9P57773 515 aa4.8□□□□□ -1.64
TRA2B-215ENST00000492417 PTENP60484 403 aa4.8□□□□□ -1.64
TRA2B-215ENST00000492417 RBL2Q08999 1139 aa4.8□□□□□ -1.64
TRA2B-215ENST00000492417 ZSCAN26Q16670 478 aa4.8□□□□□ -1.64
TRA2B-215ENST00000492417 DNAJC21Q5F1R6 531 aaKnown RBP4.8□□□□□ -1.64
TRA2B-215ENST00000492417 ARSHQ5FYA8 562 aa4.8□□□□□ -1.64
TRA2B-215ENST00000492417 LIN9Q5TKA1 542 aa4.8□□□□□ -1.64
TRA2B-215ENST00000492417 CCDC117Q8IWD4 279 aaPredicted RBP4.8□□□□□ -1.64
TRA2B-215ENST00000492417 TRPV1Q8NER1 839 aa4.8□□□□□ -1.64
TRA2B-215ENST00000492417 HPDLQ96IR7 371 aa4.8□□□□□ -1.64
TRA2B-215ENST00000492417 PPP1R9BQ96SB3 815 aa4.8□□□□□ -1.64
TRA2B-215ENST00000492417 NAA15Q9BXJ9 866 aaKnown RBP4.8□□□□□ -1.64
TRA2B-215ENST00000492417 SEMA6BQ9H3T3 888 aa4.8□□□□□ -1.64
TRA2B-215ENST00000492417 GOLGA2P5Q9HBQ8 144 aa4.8□□□□□ -1.64
TRA2B-215ENST00000492417 DPP3Q9NY33 737 aa4.8□□□□□ -1.64
TRA2B-215ENST00000492417 ABI2Q9NYB9 513 aaPredicted RBP4.8□□□□□ -1.64
TRA2B-215ENST00000492417 GTF2IRD1Q9UHL9 959 aa4.8□□□□□ -1.64
TRA2B-215ENST00000492417 TTLL3Q9Y4R7 772 aa4.8□□□□□ -1.64
TRA2B-215ENST00000492417 MYH7P12883 1935 aa4.79□□□□□ -1.64
TRA2B-215ENST00000492417 PHLPP2Q6ZVD8 1323 aa4.79□□□□□ -1.64
TRA2B-215ENST00000492417 LACTBL1A8MY62 500 aa4.79□□□□□ -1.64
TRA2B-215ENST00000492417 PPP1R3GB7ZBB8 358 aa4.79□□□□□ -1.64
TRA2B-215ENST00000492417 IKBKBO14920 756 aa4.79□□□□□ -1.64
TRA2B-215ENST00000492417 BUB1O43683 1085 aa4.79□□□□□ -1.64
TRA2B-215ENST00000492417 ZNF500O60304 480 aaPredicted RBP4.79□□□□□ -1.64
TRA2B-215ENST00000492417 AKAP3O75969 853 aa4.79□□□□□ -1.64
TRA2B-215ENST00000492417 HOXC6P09630 235 aa4.79□□□□□ -1.64
TRA2B-215ENST00000492417 CSF2RAP15509 400 aa4.79□□□□□ -1.64
TRA2B-215ENST00000492417 MUTP22033 750 aa4.79□□□□□ -1.64
TRA2B-215ENST00000492417 ACAT1P24752 427 aaKnown RBP4.79□□□□□ -1.64
TRA2B-215ENST00000492417 RGS7P49802 495 aa4.79□□□□□ -1.64
TRA2B-215ENST00000492417 CRYBB1P53674 252 aaPredicted RBP4.79□□□□□ -1.64
TRA2B-215ENST00000492417 E2F4Q16254 413 aa4.79□□□□□ -1.64
TRA2B-215ENST00000492417 CDO1Q16878 200 aa4.79□□□□□ -1.64
TRA2B-215ENST00000492417 FAM171A1Q5VUB5 890 aa4.79□□□□□ -1.64
TRA2B-215ENST00000492417 MAMDC4Q6UXC1 1216 aa4.79□□□□□ -1.64
TRA2B-215ENST00000492417 TMCO2Q7Z6W1 182 aaPredicted RBP4.79□□□□□ -1.64
TRA2B-215ENST00000492417 ZNF410Q86VK4 478 aa4.79□□□□□ -1.64
TRA2B-215ENST00000492417 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.79□□□□□ -1.64
TRA2B-215ENST00000492417 APPL2Q8NEU8 664 aa4.79□□□□□ -1.64
TRA2B-215ENST00000492417 ZNF560Q96MR9 790 aa4.79□□□□□ -1.64
TRA2B-215ENST00000492417 CEP63Q96MT8 703 aa4.79□□□□□ -1.64
TRA2B-215ENST00000492417 ALS2CR12Q96Q35 445 aa4.79□□□□□ -1.64
TRA2B-215ENST00000492417 SLC28A3Q9HAS3 691 aa4.79□□□□□ -1.64
TRA2B-215ENST00000492417 CDHR5Q9HBB8 845 aa4.79□□□□□ -1.64
TRA2B-215ENST00000492417 CACNG4Q9UBN1 327 aa4.79□□□□□ -1.64
TRA2B-215ENST00000492417 ADAMTS1Q9UHI8 967 aa4.79□□□□□ -1.64
TRA2B-215ENST00000492417 UBQLN1Q9UMX0 589 aaKnown RBP4.79□□□□□ -1.64
TRA2B-215ENST00000492417 CASP8AP2Q9UKL3 1982 aa4.79□□□□□ -1.64
TRA2B-215ENST00000492417 SMIM35A0A1B0GVV1 85 aa4.79□□□□□ -1.64
TRA2B-215ENST00000492417 OPA1O60313 960 aa4.79□□□□□ -1.64
TRA2B-215ENST00000492417 B4GALT4O60513 344 aa4.79□□□□□ -1.64
TRA2B-215ENST00000492417 FGFR1P11362 822 aa4.79□□□□□ -1.64
TRA2B-215ENST00000492417 DARSP14868 501 aaKnown RBP4.79□□□□□ -1.64
TRA2B-215ENST00000492417 GRIK1P39086 918 aa4.79□□□□□ -1.64
TRA2B-215ENST00000492417 RAP1GAPP47736 663 aa4.79□□□□□ -1.64
TRA2B-215ENST00000492417 PPM1FP49593 454 aaPredicted RBP4.79□□□□□ -1.64
TRA2B-215ENST00000492417 NUMBP49757 651 aa4.79□□□□□ -1.64
TRA2B-215ENST00000492417 KLK7P49862 253 aa4.79□□□□□ -1.64
TRA2B-215ENST00000492417 CLNS1AP54105 237 aaKnown RBP4.79□□□□□ -1.64
TRA2B-215ENST00000492417 DRAP1Q14919 205 aaPredicted RBP4.79□□□□□ -1.64
TRA2B-215ENST00000492417 CCDC6Q16204 474 aa4.79□□□□□ -1.64
TRA2B-215ENST00000492417 DCAF4L1Q3SXM0 396 aa4.79□□□□□ -1.64
TRA2B-215ENST00000492417 SIX6OS1Q8N1H7 587 aa4.79□□□□□ -1.64
TRA2B-215ENST00000492417 TMEM161BQ8NDZ6 487 aa4.79□□□□□ -1.64
TRA2B-215ENST00000492417 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.79□□□□□ -1.64
TRA2B-215ENST00000492417 DNAJC19Q96DA6 116 aa4.79□□□□□ -1.64
TRA2B-215ENST00000492417 PCYT2Q99447 389 aa4.79□□□□□ -1.64
TRA2B-215ENST00000492417 EIF2AQ9BY44 585 aaKnown RBP4.79□□□□□ -1.64
TRA2B-215ENST00000492417 INTS2Q9H0H0 1204 aaKnown RBP4.79□□□□□ -1.64
TRA2B-215ENST00000492417 LOC102724159A0A0B4J2E5 919 aa4.79□□□□□ -1.64
TRA2B-215ENST00000492417 ARHGEF37A1IGU5 675 aa4.79□□□□□ -1.64
TRA2B-215ENST00000492417 EIF3DO15371 548 aaKnown RBP eCLIP4.79□□□□□ -1.64
TRA2B-215ENST00000492417 CYP26A1O43174 497 aa4.79□□□□□ -1.64
TRA2B-215ENST00000492417 C22orf31O95567 290 aa4.79□□□□□ -1.64
TRA2B-215ENST00000492417 TUBBP07437 444 aa4.79□□□□□ -1.64
TRA2B-215ENST00000492417 ZNF18P17022 549 aa4.79□□□□□ -1.64
TRA2B-215ENST00000492417 EDNRBP24530 442 aa4.79□□□□□ -1.64
TRA2B-215ENST00000492417 CTNNB1P35222 781 aa4.79□□□□□ -1.64
TRA2B-215ENST00000492417 FMO5P49326 533 aa4.79□□□□□ -1.64
TRA2B-215ENST00000492417 MYL6P60660 151 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms