RNA–Protein interactions for RNA: ENST00000491915.1

COL6A4P1-203, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 5

Gene COL6A4P1, Length 1,251 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-203ENST00000491915 FGFR3P22607 806 aa9.74□□□□□ -0.85
COL6A4P1-203ENST00000491915 TNFSF9P41273 254 aa9.74□□□□□ -0.85
COL6A4P1-203ENST00000491915 NASPP49321 788 aaPredicted RBP9.74□□□□□ -0.85
COL6A4P1-203ENST00000491915 GTF2BQ00403 316 aa9.74□□□□□ -0.85
COL6A4P1-203ENST00000491915 MCL1Q07820 350 aa9.74□□□□□ -0.85
COL6A4P1-203ENST00000491915 PKP1Q13835 747 aa9.74□□□□□ -0.85
COL6A4P1-203ENST00000491915 ZBTB6Q15916 424 aa9.74□□□□□ -0.85
COL6A4P1-203ENST00000491915 FOXD4L6Q3SYB3 417 aaPredicted RBP9.74□□□□□ -0.85
COL6A4P1-203ENST00000491915 RRAGBQ5VZM2 374 aa9.74□□□□□ -0.85
COL6A4P1-203ENST00000491915 FOXD4L3Q6VB84 417 aaPredicted RBP9.74□□□□□ -0.85
COL6A4P1-203ENST00000491915 ZPBP2Q6X784 338 aa9.74□□□□□ -0.85
COL6A4P1-203ENST00000491915 APBB1IPQ7Z5R6 666 aaPredicted RBP9.74□□□□□ -0.85
COL6A4P1-203ENST00000491915 LINC00301Q8NCQ3 95 aa9.74□□□□□ -0.85
COL6A4P1-203ENST00000491915 RASSF8Q8NHQ8 419 aa9.74□□□□□ -0.85
COL6A4P1-203ENST00000491915 LARP4BQ92615 738 aaKnown RBP9.74□□□□□ -0.85
COL6A4P1-203ENST00000491915 SNX27Q96L92 541 aa9.74□□□□□ -0.85
COL6A4P1-203ENST00000491915 RIPOR3Q96MK2 946 aa9.74□□□□□ -0.85
COL6A4P1-203ENST00000491915 NECTIN4Q96NY8 510 aa9.74□□□□□ -0.85
COL6A4P1-203ENST00000491915 SMOC2Q9H3U7 446 aa9.74□□□□□ -0.85
COL6A4P1-203ENST00000491915 ZSCAN16Q9H4T2 348 aaPredicted RBP9.74□□□□□ -0.85
COL6A4P1-203ENST00000491915 SFXN1Q9H9B4 322 aa9.74□□□□□ -0.85
COL6A4P1-203ENST00000491915 PARVGQ9HBI0 331 aa9.74□□□□□ -0.85
COL6A4P1-203ENST00000491915 ANKFY1Q9P2R3 1169 aa9.74□□□□□ -0.85
COL6A4P1-203ENST00000491915 ODF2LQ9ULJ1 636 aa9.74□□□□□ -0.85
COL6A4P1-203ENST00000491915 MORC2Q9Y6X9 1032 aaPredicted RBP9.74□□□□□ -0.85
COL6A4P1-203ENST00000491915 TTC26A0AVF1 554 aa9.73□□□□□ -0.85
COL6A4P1-203ENST00000491915 LACTBL1A8MY62 500 aa9.73□□□□□ -0.85
COL6A4P1-203ENST00000491915 PRR33A8MZF0 331 aa9.73□□□□□ -0.85
COL6A4P1-203ENST00000491915 TMEM189-UBE2V1I3L0A0 370 aa9.73□□□□□ -0.85
COL6A4P1-203ENST00000491915 FAM189A1O60320 539 aa9.73□□□□□ -0.85
COL6A4P1-203ENST00000491915 N4BP1O75113 896 aaKnown RBP9.73□□□□□ -0.85
COL6A4P1-203ENST00000491915 PAPLNO95428 1278 aa9.73□□□□□ -0.85
COL6A4P1-203ENST00000491915 PIGRP01833 764 aa9.73□□□□□ -0.85
COL6A4P1-203ENST00000491915 KRT18P05783 430 aaKnown RBP9.73□□□□□ -0.85
COL6A4P1-203ENST00000491915 ASGR2P07307 311 aa9.73□□□□□ -0.85
COL6A4P1-203ENST00000491915 CXCL8P10145 99 aa9.73□□□□□ -0.85
COL6A4P1-203ENST00000491915 TKTP29401 623 aaKnown RBP9.73□□□□□ -0.85
COL6A4P1-203ENST00000491915 YARSP54577 528 aaKnown RBP9.73□□□□□ -0.85
COL6A4P1-203ENST00000491915 KCNA1Q09470 495 aa9.73□□□□□ -0.85
COL6A4P1-203ENST00000491915 PSMD5Q16401 504 aa9.73□□□□□ -0.85
COL6A4P1-203ENST00000491915 TRIM67Q6ZTA4 783 aa9.73□□□□□ -0.85
COL6A4P1-203ENST00000491915 HFE2Q6ZVN8 426 aa9.73□□□□□ -0.85
COL6A4P1-203ENST00000491915 ZNF720Q7Z2F6 126 aa9.73□□□□□ -0.85
COL6A4P1-203ENST00000491915 SFR1Q86XK3 245 aa9.73□□□□□ -0.85
COL6A4P1-203ENST00000491915 KRI1Q8N9T8 703 aaKnown RBP9.73□□□□□ -0.85
COL6A4P1-203ENST00000491915 KREMEN2Q8NCW0 462 aa9.73□□□□□ -0.85
COL6A4P1-203ENST00000491915 CMASQ8NFW8 434 aaPredicted RBP9.73□□□□□ -0.85
COL6A4P1-203ENST00000491915 PIK3R5Q8WYR1 880 aa9.73□□□□□ -0.85
COL6A4P1-203ENST00000491915 DDX12PQ92771 950 aa9.73□□□□□ -0.85
COL6A4P1-203ENST00000491915 STAMQ92783 540 aa9.73□□□□□ -0.85
COL6A4P1-203ENST00000491915 DDX27Q96GQ7 796 aaKnown RBP9.73□□□□□ -0.85
COL6A4P1-203ENST00000491915 STRA6Q9BX79 667 aa9.73□□□□□ -0.85
COL6A4P1-203ENST00000491915 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.73□□□□□ -0.85
COL6A4P1-203ENST00000491915 TBC1D7Q9P0N9 293 aa9.73□□□□□ -0.85
COL6A4P1-203ENST00000491915 CNTN3Q9P232 1028 aa9.73□□□□□ -0.85
COL6A4P1-203ENST00000491915 CCDC39Q9UFE4 941 aa9.73□□□□□ -0.85
COL6A4P1-203ENST00000491915 SF3B1O75533 1304 aaKnown RBP eCLIP9.73□□□□□ -0.85
COL6A4P1-203ENST00000491915 C5orf42Q9H799 3197 aa9.73□□□□□ -0.85
COL6A4P1-203ENST00000491915 PLXNA3P51805 1871 aa9.72□□□□□ -0.85
COL6A4P1-203ENST00000491915 VWA8A3KMH1 1905 aa9.72□□□□□ -0.85
COL6A4P1-203ENST00000491915 A0A0B4J269 797 aa9.72□□□□□ -0.85
COL6A4P1-203ENST00000491915 K7ENM7 598 aa9.72□□□□□ -0.85
COL6A4P1-203ENST00000491915 PODXLO00592 558 aa9.72□□□□□ -0.85
COL6A4P1-203ENST00000491915 SPTLC2O15270 562 aa9.72□□□□□ -0.85
COL6A4P1-203ENST00000491915 TBC1D4O60343 1298 aa9.72□□□□□ -0.85
COL6A4P1-203ENST00000491915 C1RP00736 705 aa9.72□□□□□ -0.85
COL6A4P1-203ENST00000491915 ADRB2P07550 413 aa9.72□□□□□ -0.85
COL6A4P1-203ENST00000491915 CLTAP09496 248 aa9.72□□□□□ -0.85
COL6A4P1-203ENST00000491915 RPL9P32969 192 aaKnown RBP9.72□□□□□ -0.85
COL6A4P1-203ENST00000491915 OR1D2P34982 312 aa9.72□□□□□ -0.85
COL6A4P1-203ENST00000491915 MATR3P43243 847 aaKnown RBP eCLIP9.72□□□□□ -0.85
COL6A4P1-203ENST00000491915 GUCY2FP51841 1108 aa9.72□□□□□ -0.85
COL6A4P1-203ENST00000491915 ELAVL2Q12926 359 aaKnown RBP9.72□□□□□ -0.85
COL6A4P1-203ENST00000491915 RAB33AQ14088 237 aa9.72□□□□□ -0.85
COL6A4P1-203ENST00000491915 MRPL58Q14197 206 aaKnown RBP9.72□□□□□ -0.85
COL6A4P1-203ENST00000491915 NOLC1Q14978 699 aaKnown RBP eCLIP9.72□□□□□ -0.85
COL6A4P1-203ENST00000491915 STK38Q15208 465 aa9.72□□□□□ -0.85
COL6A4P1-203ENST00000491915 ENOX2Q16206 610 aaKnown RBP9.72□□□□□ -0.85
COL6A4P1-203ENST00000491915 AXDND1Q5T1B0 1012 aaPredicted RBP9.72□□□□□ -0.85
COL6A4P1-203ENST00000491915 SCARA3Q6AZY7 606 aa9.72□□□□□ -0.85
COL6A4P1-203ENST00000491915 SHC4Q6S5L8 630 aa9.72□□□□□ -0.85
COL6A4P1-203ENST00000491915 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.72□□□□□ -0.85
COL6A4P1-203ENST00000491915 SV2BQ7L1I2 683 aa9.72□□□□□ -0.85
COL6A4P1-203ENST00000491915 ZDHHC14Q8IZN3 488 aa9.72□□□□□ -0.85
COL6A4P1-203ENST00000491915 PDILTQ8N807 584 aa9.72□□□□□ -0.85
COL6A4P1-203ENST00000491915 ZSWIM2Q8NEG5 633 aa9.72□□□□□ -0.85
COL6A4P1-203ENST00000491915 HDAC7Q8WUI4 952 aa9.72□□□□□ -0.85
COL6A4P1-203ENST00000491915 BICD1Q96G01 975 aa9.72□□□□□ -0.85
COL6A4P1-203ENST00000491915 CHAMP1Q96JM3 812 aa9.72□□□□□ -0.85
COL6A4P1-203ENST00000491915 UROC1Q96N76 676 aa9.72□□□□□ -0.85
COL6A4P1-203ENST00000491915 FGFBP2Q9BYJ0 223 aa9.72□□□□□ -0.85
COL6A4P1-203ENST00000491915 PRKD2Q9BZL6 878 aa9.72□□□□□ -0.85
COL6A4P1-203ENST00000491915 PLEKHA4Q9H4M7 779 aa9.72□□□□□ -0.85
COL6A4P1-203ENST00000491915 PLEKHA5Q9HAU0 1116 aa9.72□□□□□ -0.85
COL6A4P1-203ENST00000491915 TOPORSQ9NS56 1045 aaPredicted RBP9.72□□□□□ -0.85
COL6A4P1-203ENST00000491915 STK17AQ9UEE5 414 aa9.72□□□□□ -0.85
COL6A4P1-203ENST00000491915 TUBGCP4Q9UGJ1 667 aa9.72□□□□□ -0.85
COL6A4P1-203ENST00000491915 MTCL1Q9Y4B5 1905 aaKnown RBP9.72□□□□□ -0.85
COL6A4P1-203ENST00000491915 TMEM221A6NGB7 291 aa9.71□□□□□ -0.86
COL6A4P1-203ENST00000491915 SPDYE4A6NLX3 237 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms