RNA–Protein interactions for RNA: ENST00000491867.5

ATG4B-222, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 435 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-222ENST00000491867 ASB16Q96NS5 453 aa15.37■□□□□ 0.05
ATG4B-222ENST00000491867 WRAP73Q9P2S5 460 aaPredicted RBP15.37■□□□□ 0.05
ATG4B-222ENST00000491867 PPME1Q9Y570 386 aa15.37■□□□□ 0.05
ATG4B-222ENST00000491867 TICRRQ7Z2Z1 1910 aa15.37■□□□□ 0.05
ATG4B-222ENST00000491867 ZMYM2Q9UBW7 1377 aa15.36■□□□□ 0.05
ATG4B-222ENST00000491867 LOC400499M0QZD8 3231 aa15.36■□□□□ 0.05
ATG4B-222ENST00000491867 PSMC3P17980 439 aa15.36■□□□□ 0.05
ATG4B-222ENST00000491867 SPINK2P20155 84 aa15.36■□□□□ 0.05
ATG4B-222ENST00000491867 MBTD1Q05BQ5 628 aa15.36■□□□□ 0.05
ATG4B-222ENST00000491867 LRRC32Q14392 662 aa15.36■□□□□ 0.05
ATG4B-222ENST00000491867 PRSS36Q5K4E3 855 aa15.36■□□□□ 0.05
ATG4B-222ENST00000491867 LRSAM1Q6UWE0 723 aa15.36■□□□□ 0.05
ATG4B-222ENST00000491867 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.36■□□□□ 0.05
ATG4B-222ENST00000491867 DHX32Q7L7V1 743 aaKnown RBP15.36■□□□□ 0.05
ATG4B-222ENST00000491867 WDR5BQ86VZ2 330 aa15.36■□□□□ 0.05
ATG4B-222ENST00000491867 ZSWIM3Q96MP5 696 aa15.36■□□□□ 0.05
ATG4B-222ENST00000491867 CORO1BQ9BR76 489 aa15.36■□□□□ 0.05
ATG4B-222ENST00000491867 SMOC1Q9H4F8 434 aa15.36■□□□□ 0.05
ATG4B-222ENST00000491867 MTRRQ9UBK8 725 aa15.36■□□□□ 0.05
ATG4B-222ENST00000491867 CDY1Q9Y6F8 540 aa15.36■□□□□ 0.05
ATG4B-222ENST00000491867 BPTFQ12830 3046 aa15.36■□□□□ 0.05
ATG4B-222ENST00000491867 CYP3A7-CYP3A51PA0A087WV96 503 aa15.35■□□□□ 0.05
ATG4B-222ENST00000491867 CCDC196A0A1B0GTZ2 297 aa15.35■□□□□ 0.05
ATG4B-222ENST00000491867 WDR27A2RRH5 827 aa15.35■□□□□ 0.05
ATG4B-222ENST00000491867 SRRM3A6NNA2 597 aaPredicted RBP15.35■□□□□ 0.05
ATG4B-222ENST00000491867 GIPC1O14908 333 aa15.35■□□□□ 0.05
ATG4B-222ENST00000491867 ZNF263O14978 683 aa15.35■□□□□ 0.05
ATG4B-222ENST00000491867 PRPF3O43395 683 aaKnown RBP15.35■□□□□ 0.05
ATG4B-222ENST00000491867 DKC1O60832 514 aaKnown RBP eCLIP15.35■□□□□ 0.05
ATG4B-222ENST00000491867 EPN2O95208 641 aa15.35■□□□□ 0.05
ATG4B-222ENST00000491867 LRG1P02750 347 aa15.35■□□□□ 0.05
ATG4B-222ENST00000491867 FGFR3P22607 806 aa15.35■□□□□ 0.05
ATG4B-222ENST00000491867 CYP3A7P24462 503 aa15.35■□□□□ 0.05
ATG4B-222ENST00000491867 HOXA6P31267 233 aa15.35■□□□□ 0.05
ATG4B-222ENST00000491867 VIPR2P41587 438 aa15.35■□□□□ 0.05
ATG4B-222ENST00000491867 NOVA1P51513 510 aaKnown RBP15.35■□□□□ 0.05
ATG4B-222ENST00000491867 RCAN1P53805 252 aa15.35■□□□□ 0.05
ATG4B-222ENST00000491867 FOXC1Q12948 553 aa15.35■□□□□ 0.05
ATG4B-222ENST00000491867 MXD4Q14582 209 aaPredicted RBP15.35■□□□□ 0.05
ATG4B-222ENST00000491867 ADCK5Q3MIX3 580 aa15.35■□□□□ 0.05
ATG4B-222ENST00000491867 SLC27A1Q6PCB7 646 aa15.35■□□□□ 0.05
ATG4B-222ENST00000491867 IFNLR1Q8IU57 520 aaPredicted RBP15.35■□□□□ 0.05
ATG4B-222ENST00000491867 RASEFQ8IZ41 740 aa15.35■□□□□ 0.05
ATG4B-222ENST00000491867 CCDC148Q8NFR7 591 aa15.35■□□□□ 0.05
ATG4B-222ENST00000491867 SMARCD2Q92925 531 aa15.35■□□□□ 0.05
ATG4B-222ENST00000491867 LOXL4Q96JB6 756 aa15.35■□□□□ 0.05
ATG4B-222ENST00000491867 VPS54Q9P1Q0 977 aa15.35■□□□□ 0.05
ATG4B-222ENST00000491867 LAMA5O15230 3695 aa15.35■□□□□ 0.05
ATG4B-222ENST00000491867 COL4A2P08572 1712 aa15.34■□□□□ 0.05
ATG4B-222ENST00000491867 ARHGEF37A1IGU5 675 aa15.34■□□□□ 0.05
ATG4B-222ENST00000491867 TMEM8BA6NDV4 472 aa15.34■□□□□ 0.05
ATG4B-222ENST00000491867 PRRG1O14668 218 aa15.34■□□□□ 0.05
ATG4B-222ENST00000491867 PTGESO14684 152 aa15.34■□□□□ 0.05
ATG4B-222ENST00000491867 ZNF197O14709 1029 aa15.34■□□□□ 0.05
ATG4B-222ENST00000491867 P4HBP07237 508 aaKnown RBP15.34■□□□□ 0.05
ATG4B-222ENST00000491867 IGFBP6P24592 240 aaPredicted RBP15.34■□□□□ 0.05
ATG4B-222ENST00000491867 YWHABP31946 246 aaKnown RBP15.34■□□□□ 0.05
ATG4B-222ENST00000491867 CCR2P41597 374 aa15.34■□□□□ 0.05
ATG4B-222ENST00000491867 RAP1GAPP47736 663 aa15.34■□□□□ 0.05
ATG4B-222ENST00000491867 AKAP17AQ02040 695 aaKnown RBP15.34■□□□□ 0.05
ATG4B-222ENST00000491867 RING1Q06587 406 aa15.34■□□□□ 0.05
ATG4B-222ENST00000491867 SPIRE1Q08AE8 756 aa15.34■□□□□ 0.05
ATG4B-222ENST00000491867 TFDP1Q14186 410 aa15.34■□□□□ 0.05
ATG4B-222ENST00000491867 TSGA10IPQ3SY00 556 aa15.34■□□□□ 0.05
ATG4B-222ENST00000491867 XKR9Q5GH70 373 aa15.34■□□□□ 0.05
ATG4B-222ENST00000491867 WDR44Q5JSH3 913 aa15.34■□□□□ 0.05
ATG4B-222ENST00000491867 RNF43Q68DV7 783 aa15.34■□□□□ 0.05
ATG4B-222ENST00000491867 CACNA2D4Q7Z3S7 1137 aa15.34■□□□□ 0.05
ATG4B-222ENST00000491867 KBTBD6Q86V97 674 aa15.34■□□□□ 0.05
ATG4B-222ENST00000491867 DEPDC1BQ8WUY9 529 aa15.34■□□□□ 0.05
ATG4B-222ENST00000491867 MTRQ99707 1265 aa15.34■□□□□ 0.05
ATG4B-222ENST00000491867 TMEM121BQ9BXQ6 578 aaPredicted RBP15.34■□□□□ 0.05
ATG4B-222ENST00000491867 CXCL16Q9H2A7 254 aa15.34■□□□□ 0.05
ATG4B-222ENST00000491867 SLKQ9H2G2 1235 aaPredicted RBP15.34■□□□□ 0.05
ATG4B-222ENST00000491867 LHX6Q9UPM6 363 aa15.34■□□□□ 0.05
ATG4B-222ENST00000491867 WASF3Q9UPY6 502 aa15.34■□□□□ 0.05
ATG4B-222ENST00000491867 A0A1B0GUA9 196 aa15.33■□□□□ 0.04
ATG4B-222ENST00000491867 ARNTLO00327 626 aa15.33■□□□□ 0.04
ATG4B-222ENST00000491867 ZBTB39O15060 712 aa15.33■□□□□ 0.04
ATG4B-222ENST00000491867 MICAL2O94851 1124 aa15.33■□□□□ 0.04
ATG4B-222ENST00000491867 THP07101 528 aa15.33■□□□□ 0.04
ATG4B-222ENST00000491867 ELF1P32519 619 aa15.33■□□□□ 0.04
ATG4B-222ENST00000491867 SOX9P48436 509 aa15.33■□□□□ 0.04
ATG4B-222ENST00000491867 PPP2R5CQ13362 524 aa15.33■□□□□ 0.04
ATG4B-222ENST00000491867 CAPSQ13938 189 aa15.33■□□□□ 0.04
ATG4B-222ENST00000491867 KRT32Q14532 448 aa15.33■□□□□ 0.04
ATG4B-222ENST00000491867 PLA2G2CQ5R387 149 aa15.33■□□□□ 0.04
ATG4B-222ENST00000491867 OTUD6AQ7L8S5 288 aa15.33■□□□□ 0.04
ATG4B-222ENST00000491867 SKAP1Q86WV1 359 aa15.33■□□□□ 0.04
ATG4B-222ENST00000491867 ASAP3Q8TDY4 903 aa15.33■□□□□ 0.04
ATG4B-222ENST00000491867 GAB3Q8WWW8 586 aa15.33■□□□□ 0.04
ATG4B-222ENST00000491867 LXNQ9BS40 222 aa15.33■□□□□ 0.04
ATG4B-222ENST00000491867 ADAM33Q9BZ11 813 aa15.33■□□□□ 0.04
ATG4B-222ENST00000491867 XPNPEP1Q9NQW7 623 aa15.33■□□□□ 0.04
ATG4B-222ENST00000491867 VAV3Q9UKW4 847 aa15.33■□□□□ 0.04
ATG4B-222ENST00000491867 BACE2Q9Y5Z0 518 aa15.33■□□□□ 0.04
ATG4B-222ENST00000491867 ASXL3Q9C0F0 2248 aa15.32■□□□□ 0.04
ATG4B-222ENST00000491867 SLC38A8A6NNN8 435 aa15.32■□□□□ 0.04
ATG4B-222ENST00000491867 RPP40O75818 363 aaKnown RBP15.32■□□□□ 0.04
ATG4B-222ENST00000491867 TOP3BO95985 862 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms