RNA–Protein interactions for RNA: ENST00000491407.1

PPP1R35-205, Transcript of protein phosphatase 1 regulatory subunit 35, human

TSL 5

Gene PPP1R35, Length 942 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP1R35-205	ENST00000491407	LIG1	P18858	919 aa		29.81	■■■□□ 2.36
PPP1R35-205	ENST00000491407	FAM187B	Q17R55	369 aa		29.81	■■■□□ 2.36
PPP1R35-205	ENST00000491407	HYI	Q5T013	277 aa		29.81	■■■□□ 2.36
PPP1R35-205	ENST00000491407	PARM1	Q6UWI2	310 aa		29.81	■■■□□ 2.36
PPP1R35-205	ENST00000491407	SNX21	Q969T3	373 aa		29.81	■■■□□ 2.36
PPP1R35-205	ENST00000491407	PRIMPOL	Q96LW4	560 aa		29.81	■■■□□ 2.36
PPP1R35-205	ENST00000491407	KLK14	Q9P0G3	267 aa		29.81	■■■□□ 2.36
PPP1R35-205	ENST00000491407	CDH7	Q9ULB5	785 aa		29.81	■■■□□ 2.36
PPP1R35-205	ENST00000491407	USP20	Q9Y2K6	914 aa		29.81	■■■□□ 2.36
PPP1R35-205	ENST00000491407	BMP15	O95972	392 aa		29.8	■■■□□ 2.36
PPP1R35-205	ENST00000491407	GRIK3	Q13003	919 aa		29.8	■■■□□ 2.36
PPP1R35-205	ENST00000491407	REST	Q13127	1097 aa		29.8	■■■□□ 2.36
PPP1R35-205	ENST00000491407	SNW1	Q13573	536 aa	Known RBP	29.8	■■■□□ 2.36
PPP1R35-205	ENST00000491407	RINT1	Q6NUQ1	792 aa		29.8	■■■□□ 2.36
PPP1R35-205	ENST00000491407	SLC27A1	Q6PCB7	646 aa		29.8	■■■□□ 2.36
PPP1R35-205	ENST00000491407	MAML2	Q8IZL2	1156 aa	Predicted RBP	29.8	■■■□□ 2.36
PPP1R35-205	ENST00000491407	SUMF1	Q8NBK3	374 aa		29.8	■■■□□ 2.36
PPP1R35-205	ENST00000491407	CDK5RAP3	Q96JB5	506 aa		29.8	■■■□□ 2.36
PPP1R35-205	ENST00000491407	CCDC113	Q9H0I3	377 aa		29.8	■■■□□ 2.36
PPP1R35-205	ENST00000491407	PARP2	Q9UGN5	583 aa		29.8	■■■□□ 2.36
PPP1R35-205	ENST00000491407	KANSL1L	A0AUZ9	987 aa		29.79	■■■□□ 2.36
PPP1R35-205	ENST00000491407	PRKCB	P05771	671 aa		29.79	■■■□□ 2.36
PPP1R35-205	ENST00000491407	NTHL1	P78549	312 aa		29.79	■■■□□ 2.36
PPP1R35-205	ENST00000491407	GRIN1	Q05586	938 aa		29.79	■■■□□ 2.36
PPP1R35-205	ENST00000491407	MAPK6	Q16659	721 aa		29.79	■■■□□ 2.36
PPP1R35-205	ENST00000491407	FAM173B	Q6P4H8	233 aa		29.79	■■■□□ 2.36
PPP1R35-205	ENST00000491407	C1orf186	Q6ZWK4	172 aa		29.79	■■■□□ 2.36
PPP1R35-205	ENST00000491407	AK8	Q96MA6	479 aa		29.79	■■■□□ 2.36
PPP1R35-205	ENST00000491407	BCO2	Q9BYV7	579 aa		29.79	■■■□□ 2.36
PPP1R35-205	ENST00000491407	SPATA6	Q9NWH7	488 aa	Predicted RBP	29.79	■■■□□ 2.36
PPP1R35-205	ENST00000491407	DLL3	Q9NYJ7	618 aa		29.79	■■■□□ 2.36
PPP1R35-205	ENST00000491407	CACNG4	Q9UBN1	327 aa		29.79	■■■□□ 2.36
PPP1R35-205	ENST00000491407	FBXW11	Q9UKB1	542 aa		29.79	■■■□□ 2.36
PPP1R35-205	ENST00000491407	MTMR6	Q9Y217	621 aa		29.79	■■■□□ 2.36
PPP1R35-205	ENST00000491407	CLIC4	Q9Y696	253 aa		29.79	■■■□□ 2.36
PPP1R35-205	ENST00000491407	DNAH14	Q0VDD8	3507 aa		29.79	■■■□□ 2.36
PPP1R35-205	ENST00000491407	PATJ	Q8NI35	1801 aa		29.79	■■■□□ 2.36
PPP1R35-205	ENST00000491407	HIP1R	O75146	1068 aa		29.78	■■■□□ 2.36
PPP1R35-205	ENST00000491407	EDN1	P05305	212 aa		29.78	■■■□□ 2.36
PPP1R35-205	ENST00000491407	PRPF4B	Q13523	1007 aa	Known RBP	29.78	■■■□□ 2.36
PPP1R35-205	ENST00000491407	TMEM132A	Q24JP5	1023 aa		29.78	■■■□□ 2.36
PPP1R35-205	ENST00000491407	RTP2	Q5QGT7	225 aa		29.78	■■■□□ 2.36
PPP1R35-205	ENST00000491407	LIN9	Q5TKA1	542 aa		29.78	■■■□□ 2.36
PPP1R35-205	ENST00000491407	DAW1	Q8N136	415 aa		29.78	■■■□□ 2.36
PPP1R35-205	ENST00000491407	COL4A3	Q01955	1670 aa		29.78	■■■□□ 2.36
PPP1R35-205	ENST00000491407	SF3B1	O75533	1304 aa	Known RBP eCLIP	29.77	■■■□□ 2.36
PPP1R35-205	ENST00000491407	LAMTOR5	O43504	91 aa		29.77	■■■□□ 2.36
PPP1R35-205	ENST00000491407	HNRNPA1	P09651	372 aa	Known RBP eCLIP	29.77	■■■□□ 2.36
PPP1R35-205	ENST00000491407	UBA7	P41226	1012 aa		29.77	■■■□□ 2.36
PPP1R35-205	ENST00000491407	HSP90AA2P	Q14568	343 aa	Predicted RBP	29.77	■■■□□ 2.36
PPP1R35-205	ENST00000491407	MLF2	Q15773	248 aa	Predicted RBP	29.77	■■■□□ 2.36
PPP1R35-205	ENST00000491407	TMEM119	Q4V9L6	283 aa		29.77	■■■□□ 2.36
PPP1R35-205	ENST00000491407	PPM1L	Q5SGD2	360 aa		29.77	■■■□□ 2.36
PPP1R35-205	ENST00000491407	MTSS1L	Q765P7	747 aa		29.77	■■■□□ 2.36
PPP1R35-205	ENST00000491407	HASPIN	Q8TF76	798 aa		29.77	■■■□□ 2.36
PPP1R35-205	ENST00000491407	PAAF1	Q9BRP4	392 aa		29.77	■■■□□ 2.36
PPP1R35-205	ENST00000491407	POLI	Q9UNA4	740 aa		29.77	■■■□□ 2.36
PPP1R35-205	ENST00000491407	CEP250	Q9BV73	2442 aa		29.77	■■■□□ 2.36
PPP1R35-205	ENST00000491407	CCDC169	A6NNP5	214 aa		29.76	■■■□□ 2.35
PPP1R35-205	ENST00000491407	ACKR2	O00590	384 aa		29.76	■■■□□ 2.35
PPP1R35-205	ENST00000491407	PEX3	P56589	373 aa		29.76	■■■□□ 2.35
PPP1R35-205	ENST00000491407	UBXN2B	Q14CS0	331 aa		29.76	■■■□□ 2.35
PPP1R35-205	ENST00000491407	RSPO4	Q2I0M5	234 aa	Predicted RBP	29.76	■■■□□ 2.35
PPP1R35-205	ENST00000491407	CEP57	Q86XR8	500 aa		29.76	■■■□□ 2.35
PPP1R35-205	ENST00000491407	SYT2	Q8N9I0	419 aa	Predicted RBP	29.76	■■■□□ 2.35
PPP1R35-205	ENST00000491407	FGF13	Q92913	245 aa		29.76	■■■□□ 2.35
PPP1R35-205	ENST00000491407	CLSTN3	Q9BQT9	956 aa		29.76	■■■□□ 2.35
PPP1R35-205	ENST00000491407	PDZD7	Q9H5P4	517 aa		29.76	■■■□□ 2.35
PPP1R35-205	ENST00000491407	NCDN	Q9UBB6	729 aa		29.76	■■■□□ 2.35
PPP1R35-205	ENST00000491407	N4BP3	O15049	544 aa		29.75	■■■□□ 2.35
PPP1R35-205	ENST00000491407	C8A	P07357	584 aa		29.75	■■■□□ 2.35
PPP1R35-205	ENST00000491407	PLA2G4B	P0C869	781 aa		29.75	■■■□□ 2.35
PPP1R35-205	ENST00000491407	NPTX2	P47972	431 aa		29.75	■■■□□ 2.35
PPP1R35-205	ENST00000491407	EFNA5	P52803	228 aa		29.75	■■■□□ 2.35
PPP1R35-205	ENST00000491407	SLC12A3	P55017	1021 aa		29.75	■■■□□ 2.35
PPP1R35-205	ENST00000491407	PRKCQ	Q04759	706 aa		29.75	■■■□□ 2.35
PPP1R35-205	ENST00000491407	RAD51AP2	Q09MP3	1159 aa		29.75	■■■□□ 2.35
PPP1R35-205	ENST00000491407	MAPK7	Q13164	816 aa		29.75	■■■□□ 2.35
PPP1R35-205	ENST00000491407	ZNF528	Q3MIS6	628 aa		29.75	■■■□□ 2.35
PPP1R35-205	ENST00000491407	SLC44A4	Q53GD3	710 aa		29.75	■■■□□ 2.35
PPP1R35-205	ENST00000491407	KCTD17	Q8N5Z5	321 aa		29.75	■■■□□ 2.35
PPP1R35-205	ENST00000491407	TTPAL	Q9BTX7	342 aa		29.75	■■■□□ 2.35
PPP1R35-205	ENST00000491407	DDX23	Q9BUQ8	820 aa	Known RBP	29.75	■■■□□ 2.35
PPP1R35-205	ENST00000491407	FBXO4	Q9UKT5	387 aa		29.75	■■■□□ 2.35
PPP1R35-205	ENST00000491407	FRYL	O94915	3013 aa		29.75	■■■□□ 2.35
PPP1R35-205	ENST00000491407	ZMYM2	Q9UBW7	1377 aa		29.75	■■■□□ 2.35
PPP1R35-205	ENST00000491407	SFI1	A8K8P3	1242 aa		29.74	■■■□□ 2.35
PPP1R35-205	ENST00000491407	CCL16	O15467	120 aa		29.74	■■■□□ 2.35
PPP1R35-205	ENST00000491407	STX6	O43752	255 aa		29.74	■■■□□ 2.35
PPP1R35-205	ENST00000491407	LONP1	P36776	959 aa	Known RBP	29.74	■■■□□ 2.35
PPP1R35-205	ENST00000491407	TUSC3	Q13454	348 aa		29.74	■■■□□ 2.35
PPP1R35-205	ENST00000491407	PTPA	Q15257	358 aa		29.74	■■■□□ 2.35
PPP1R35-205	ENST00000491407	PSMD5	Q16401	504 aa		29.74	■■■□□ 2.35
PPP1R35-205	ENST00000491407	VARS2	Q5ST30	1063 aa	Known RBP	29.74	■■■□□ 2.35
PPP1R35-205	ENST00000491407	FAM171A1	Q5VUB5	890 aa		29.74	■■■□□ 2.35
PPP1R35-205	ENST00000491407	HSCB	Q8IWL3	235 aa		29.74	■■■□□ 2.35
PPP1R35-205	ENST00000491407	CALML4	Q96GE6	196 aa		29.74	■■■□□ 2.35
PPP1R35-205	ENST00000491407	DRC1	Q96MC2	740 aa		29.74	■■■□□ 2.35
PPP1R35-205	ENST00000491407	MTF2	Q9Y483	593 aa	Predicted RBP	29.74	■■■□□ 2.35
PPP1R35-205	ENST00000491407	CASTOR2	A6NHX0	329 aa		29.73	■■■□□ 2.35

Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms