RNA–Protein interactions for RNA: ENST00000491062.5

FXR1-220, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2 BASIC

Gene FXR1, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-220ENST00000491062 CDR2Q01850 454 aa13.13□□□□□ -0.31
FXR1-220ENST00000491062 NBPF9Q3BBW0 867 aa13.13□□□□□ -0.31
FXR1-220ENST00000491062 RHBDF2Q6PJF5 856 aa13.13□□□□□ -0.31
FXR1-220ENST00000491062 RNF207Q6ZRF8 634 aa13.13□□□□□ -0.31
FXR1-220ENST00000491062 SYDE1Q6ZW31 735 aaPredicted RBP13.13□□□□□ -0.31
FXR1-220ENST00000491062 MIGA2Q7L4E1 593 aa13.13□□□□□ -0.31
FXR1-220ENST00000491062 CCDC105Q8IYK2 499 aa13.13□□□□□ -0.31
FXR1-220ENST00000491062 SEPT12Q8IYM1 358 aa13.13□□□□□ -0.31
FXR1-220ENST00000491062 NLGN1Q8N2Q7 840 aa13.13□□□□□ -0.31
FXR1-220ENST00000491062 SLC17A8Q8NDX2 589 aa13.13□□□□□ -0.31
FXR1-220ENST00000491062 ACER1Q8TDN7 264 aa13.13□□□□□ -0.31
FXR1-220ENST00000491062 ZNF653Q96CK0 615 aa13.13□□□□□ -0.31
FXR1-220ENST00000491062 SERPINB12Q96P63 405 aa13.13□□□□□ -0.31
FXR1-220ENST00000491062 IWS1Q96ST2 819 aa13.13□□□□□ -0.31
FXR1-220ENST00000491062 TDRD3Q9H7E2 651 aaKnown RBP13.13□□□□□ -0.31
FXR1-220ENST00000491062 MCM8Q9UJA3 840 aa13.13□□□□□ -0.31
FXR1-220ENST00000491062 TPX2Q9ULW0 747 aaKnown RBP13.13□□□□□ -0.31
FXR1-220ENST00000491062 COQ4Q9Y3A0 265 aa13.13□□□□□ -0.31
FXR1-220ENST00000491062 PCDHB3Q9Y5E6 796 aa13.13□□□□□ -0.31
FXR1-220ENST00000491062 ADRB2P07550 413 aa13.12□□□□□ -0.31
FXR1-220ENST00000491062 MAN1A1P33908 653 aa13.12□□□□□ -0.31
FXR1-220ENST00000491062 NCKAP1LP55160 1127 aa13.12□□□□□ -0.31
FXR1-220ENST00000491062 CALCOCO2Q13137 446 aa13.12□□□□□ -0.31
FXR1-220ENST00000491062 FAM228AQ86W67 206 aa13.12□□□□□ -0.31
FXR1-220ENST00000491062 PLVAPQ9BX97 442 aa13.12□□□□□ -0.31
FXR1-220ENST00000491062 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.12□□□□□ -0.31
FXR1-220ENST00000491062 AAASQ9NRG9 546 aa13.12□□□□□ -0.31
FXR1-220ENST00000491062 ZBTB21Q9ULJ3 1066 aa13.12□□□□□ -0.31
FXR1-220ENST00000491062 CFAP73A6NFT4 308 aa13.12□□□□□ -0.31
FXR1-220ENST00000491062 SMIM23A6NLE4 172 aa13.12□□□□□ -0.31
FXR1-220ENST00000491062 TP73O15350 636 aa13.12□□□□□ -0.31
FXR1-220ENST00000491062 DHX15O43143 795 aaKnown RBP13.12□□□□□ -0.31
FXR1-220ENST00000491062 CYP26A1O43174 497 aa13.12□□□□□ -0.31
FXR1-220ENST00000491062 C21orf2O43822 256 aa13.12□□□□□ -0.31
FXR1-220ENST00000491062 CYP11B1P15538 503 aa13.12□□□□□ -0.31
FXR1-220ENST00000491062 ITGB5P18084 799 aa13.12□□□□□ -0.31
FXR1-220ENST00000491062 ATP5DP30049 168 aa13.12□□□□□ -0.31
FXR1-220ENST00000491062 PDE6CP51160 858 aa13.12□□□□□ -0.31
FXR1-220ENST00000491062 GPC3P51654 580 aa13.12□□□□□ -0.31
FXR1-220ENST00000491062 COPS2P61201 443 aa13.12□□□□□ -0.31
FXR1-220ENST00000491062 ELF3P78545 371 aaPredicted RBP13.12□□□□□ -0.31
FXR1-220ENST00000491062 GHRHRQ02643 423 aa13.12□□□□□ -0.31
FXR1-220ENST00000491062 ENPEPQ07075 957 aa13.12□□□□□ -0.31
FXR1-220ENST00000491062 PTK6Q13882 451 aa13.12□□□□□ -0.31
FXR1-220ENST00000491062 TNIP1Q15025 636 aa13.12□□□□□ -0.31
FXR1-220ENST00000491062 HAUS6Q7Z4H7 955 aa13.12□□□□□ -0.31
FXR1-220ENST00000491062 SLC47A2Q86VL8 602 aa13.12□□□□□ -0.31
FXR1-220ENST00000491062 LDHDQ86WU2 507 aa13.12□□□□□ -0.31
FXR1-220ENST00000491062 CPNE8Q86YQ8 564 aa13.12□□□□□ -0.31
FXR1-220ENST00000491062 HELQQ8TDG4 1101 aa13.12□□□□□ -0.31
FXR1-220ENST00000491062 MAIP1Q8WWC4 291 aa13.12□□□□□ -0.31
FXR1-220ENST00000491062 PRMT1Q99873 361 aaKnown RBP13.12□□□□□ -0.31
FXR1-220ENST00000491062 PRR14Q9BWN1 585 aa13.12□□□□□ -0.31
FXR1-220ENST00000491062 CDC42EP4Q9H3Q1 356 aaKnown RBP13.12□□□□□ -0.31
FXR1-220ENST00000491062 HOMER3Q9NSC5 361 aa13.12□□□□□ -0.31
FXR1-220ENST00000491062 ZHX2Q9Y6X8 837 aa13.12□□□□□ -0.31
FXR1-220ENST00000491062 SLC8A1P32418 973 aa13.11□□□□□ -0.31
FXR1-220ENST00000491062 KRT17Q04695 432 aa13.11□□□□□ -0.31
FXR1-220ENST00000491062 NEDD9Q14511 834 aa13.11□□□□□ -0.31
FXR1-220ENST00000491062 GRIPAP1Q4V328 841 aa13.11□□□□□ -0.31
FXR1-220ENST00000491062 MORN1Q5T089 497 aa13.11□□□□□ -0.31
FXR1-220ENST00000491062 MSL1Q68DK7 614 aa13.11□□□□□ -0.31
FXR1-220ENST00000491062 ACAD10Q6JQN1 1059 aa13.11□□□□□ -0.31
FXR1-220ENST00000491062 BLOC1S3Q6QNY0 202 aa13.11□□□□□ -0.31
FXR1-220ENST00000491062 TRPM8Q7Z2W7 1104 aa13.11□□□□□ -0.31
FXR1-220ENST00000491062 EXOC3L1Q86VI1 746 aa13.11□□□□□ -0.31
FXR1-220ENST00000491062 DDX1Q92499 740 aaKnown RBP13.11□□□□□ -0.31
FXR1-220ENST00000491062 SEMA4DQ92854 862 aa13.11□□□□□ -0.31
FXR1-220ENST00000491062 TMEM8AQ9HCN3 771 aa13.11□□□□□ -0.31
FXR1-220ENST00000491062 FEM1BQ9UK73 627 aa13.11□□□□□ -0.31
FXR1-220ENST00000491062 BCS1LQ9Y276 419 aa13.11□□□□□ -0.31
FXR1-220ENST00000491062 SLC27A5Q9Y2P5 690 aa13.11□□□□□ -0.31
FXR1-220ENST00000491062 FAM170AA1A519 330 aa13.1□□□□□ -0.31
FXR1-220ENST00000491062 SNX3O60493 162 aa13.1□□□□□ -0.31
FXR1-220ENST00000491062 TCEA3O75764 348 aa13.1□□□□□ -0.31
FXR1-220ENST00000491062 ITIH2P19823 946 aa13.1□□□□□ -0.31
FXR1-220ENST00000491062 GTF2H1P32780 548 aa13.1□□□□□ -0.31
FXR1-220ENST00000491062 QARSP47897 775 aaKnown RBP13.1□□□□□ -0.31
FXR1-220ENST00000491062 KCNJ1P48048 391 aa13.1□□□□□ -0.31
FXR1-220ENST00000491062 CAV1Q03135 178 aa13.1□□□□□ -0.31
FXR1-220ENST00000491062 RIPK1Q13546 671 aa13.1□□□□□ -0.31
FXR1-220ENST00000491062 PPP1R7Q15435 360 aa13.1□□□□□ -0.31
FXR1-220ENST00000491062 CLEC16AQ2KHT3 1053 aa13.1□□□□□ -0.31
FXR1-220ENST00000491062 KRT39Q6A163 491 aa13.1□□□□□ -0.31
FXR1-220ENST00000491062 PPM1KQ8N3J5 372 aa13.1□□□□□ -0.31
FXR1-220ENST00000491062 ZSWIM2Q8NEG5 633 aa13.1□□□□□ -0.31
FXR1-220ENST00000491062 SNF8Q96H20 258 aa13.1□□□□□ -0.31
FXR1-220ENST00000491062 BTBD6Q96KE9 485 aa13.1□□□□□ -0.31
FXR1-220ENST00000491062 NT5C1BQ96P26 610 aa13.1□□□□□ -0.31
FXR1-220ENST00000491062 MTFR1LQ9H019 292 aa13.1□□□□□ -0.31
FXR1-220ENST00000491062 AGO4Q9HCK5 861 aaKnown RBP13.1□□□□□ -0.31
FXR1-220ENST00000491062 AVENQ9NQS1 362 aaPredicted RBP13.1□□□□□ -0.31
FXR1-220ENST00000491062 KCNH7Q9NS40 1196 aa13.1□□□□□ -0.31
FXR1-220ENST00000491062 CHORDC1Q9UHD1 332 aaPredicted RBP13.1□□□□□ -0.31
FXR1-220ENST00000491062 EXOC7Q9UPT5 735 aa13.1□□□□□ -0.31
FXR1-220ENST00000491062 PTPN22Q9Y2R2 807 aa13.1□□□□□ -0.31
FXR1-220ENST00000491062 UBIAD1Q9Y5Z9 338 aa13.1□□□□□ -0.31
FXR1-220ENST00000491062 ARID2Q68CP9 1835 aa13.1□□□□□ -0.31
FXR1-220ENST00000491062 DDX39AO00148 427 aaKnown RBP13.09□□□□□ -0.31
FXR1-220ENST00000491062 GRIN3BO60391 1043 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms