RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 HNRNPDLO14979 420 aaKnown RBP16.61■□□□□ 0.25
COL27A1-206ENST00000490831 ADRB2P07550 413 aa16.61■□□□□ 0.25
COL27A1-206ENST00000490831 HARSP12081 509 aaKnown RBP16.61■□□□□ 0.25
COL27A1-206ENST00000490831 CLCNKBP51801 687 aa16.61■□□□□ 0.25
COL27A1-206ENST00000490831 RTP2Q5QGT7 225 aa16.61■□□□□ 0.25
COL27A1-206ENST00000490831 CES5AQ6NT32 575 aa16.61■□□□□ 0.25
COL27A1-206ENST00000490831 SPRYD3Q8NCJ5 442 aa16.61■□□□□ 0.25
COL27A1-206ENST00000490831 HASPINQ8TF76 798 aa16.61■□□□□ 0.25
COL27A1-206ENST00000490831 HDAC7Q8WUI4 952 aa16.61■□□□□ 0.25
COL27A1-206ENST00000490831 RIN2Q8WYP3 895 aaPredicted RBP16.61■□□□□ 0.25
COL27A1-206ENST00000490831 B3GALT6Q96L58 329 aa16.61■□□□□ 0.25
COL27A1-206ENST00000490831 NECTIN4Q96NY8 510 aa16.61■□□□□ 0.25
COL27A1-206ENST00000490831 TTPALQ9BTX7 342 aa16.61■□□□□ 0.25
COL27A1-206ENST00000490831 PANK2Q9BZ23 570 aa16.61■□□□□ 0.25
COL27A1-206ENST00000490831 ZHX3Q9H4I2 956 aa16.61■□□□□ 0.25
COL27A1-206ENST00000490831 EPHX3Q9H6B9 360 aa16.61■□□□□ 0.25
COL27A1-206ENST00000490831 SFXN1Q9H9B4 322 aa16.61■□□□□ 0.25
COL27A1-206ENST00000490831 GOLGA2P5Q9HBQ8 144 aa16.61■□□□□ 0.25
COL27A1-206ENST00000490831 KBTBD4Q9NVX7 518 aa16.61■□□□□ 0.25
COL27A1-206ENST00000490831 CFAP45Q9UL16 551 aa16.61■□□□□ 0.25
COL27A1-206ENST00000490831 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.61■□□□□ 0.25
COL27A1-206ENST00000490831 STYXL1Q9Y6J8 313 aa16.61■□□□□ 0.25
COL27A1-206ENST00000490831 PDCD11Q14690 1871 aaKnown RBP16.61■□□□□ 0.25
COL27A1-206ENST00000490831 OGTO15294 1046 aa16.6■□□□□ 0.25
COL27A1-206ENST00000490831 B3GAT3O94766 335 aa16.6■□□□□ 0.25
COL27A1-206ENST00000490831 FGFR3P22607 806 aa16.6■□□□□ 0.25
COL27A1-206ENST00000490831 IGFBP6P24592 240 aaPredicted RBP16.6■□□□□ 0.25
COL27A1-206ENST00000490831 RPL9P32969 192 aaKnown RBP16.6■□□□□ 0.25
COL27A1-206ENST00000490831 MTHFRP42898 656 aa16.6■□□□□ 0.25
COL27A1-206ENST00000490831 SEZ6Q53EL9 994 aa16.6■□□□□ 0.25
COL27A1-206ENST00000490831 ZC2HC1CQ53FD0 456 aaPredicted RBP16.6■□□□□ 0.25
COL27A1-206ENST00000490831 FAM171A1Q5VUB5 890 aa16.6■□□□□ 0.25
COL27A1-206ENST00000490831 CNNM4Q6P4Q7 775 aa16.6■□□□□ 0.25
COL27A1-206ENST00000490831 PDXDC1Q6P996 788 aa16.6■□□□□ 0.25
COL27A1-206ENST00000490831 LILRA6Q6PI73 481 aa16.6■□□□□ 0.25
COL27A1-206ENST00000490831 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.6■□□□□ 0.25
COL27A1-206ENST00000490831 PDILTQ8N807 584 aa16.6■□□□□ 0.25
COL27A1-206ENST00000490831 C3orf58Q8NDZ4 430 aa16.6■□□□□ 0.25
COL27A1-206ENST00000490831 CMASQ8NFW8 434 aaPredicted RBP16.6■□□□□ 0.25
COL27A1-206ENST00000490831 LNX1Q8TBB1 728 aaPredicted RBP16.6■□□□□ 0.25
COL27A1-206ENST00000490831 TSPAN18Q96SJ8 248 aa16.6■□□□□ 0.25
COL27A1-206ENST00000490831 APOL5Q9BWW9 433 aa16.6■□□□□ 0.25
COL27A1-206ENST00000490831 C1QTNF1Q9BXJ1 281 aa16.6■□□□□ 0.25
COL27A1-206ENST00000490831 RHOBTB2Q9BYZ6 727 aa16.6■□□□□ 0.25
COL27A1-206ENST00000490831 TNMDQ9H2S6 317 aa16.6■□□□□ 0.25
COL27A1-206ENST00000490831 DPP7Q9UHL4 492 aa16.6■□□□□ 0.25
COL27A1-206ENST00000490831 RCOR1Q9UKL0 485 aa16.6■□□□□ 0.25
COL27A1-206ENST00000490831 ZDHHC9Q9Y397 364 aa16.6■□□□□ 0.25
COL27A1-206ENST00000490831 VWA8A3KMH1 1905 aa16.59■□□□□ 0.25
COL27A1-206ENST00000490831 GLUD1P00367 558 aa16.59■□□□□ 0.25
COL27A1-206ENST00000490831 CXCL8P10145 99 aa16.59■□□□□ 0.25
COL27A1-206ENST00000490831 DNM1Q05193 864 aaKnown RBP16.59■□□□□ 0.25
COL27A1-206ENST00000490831 ZBTB6Q15916 424 aa16.59■□□□□ 0.25
COL27A1-206ENST00000490831 RARS2Q5T160 578 aaKnown RBP16.59■□□□□ 0.25
COL27A1-206ENST00000490831 C15orf39Q6ZRI6 1047 aa16.59■□□□□ 0.25
COL27A1-206ENST00000490831 C12orf76Q8N812 135 aaPredicted RBP16.59■□□□□ 0.25
COL27A1-206ENST00000490831 RIPOR3Q96MK2 946 aa16.59■□□□□ 0.25
COL27A1-206ENST00000490831 PLEKHA4Q9H4M7 779 aa16.59■□□□□ 0.25
COL27A1-206ENST00000490831 PCDHA7Q9UN72 937 aa16.59■□□□□ 0.25
COL27A1-206ENST00000490831 PLXNA3P51805 1871 aa16.59■□□□□ 0.25
COL27A1-206ENST00000490831 ANKRD63C9JTQ0 380 aa16.58■□□□□ 0.24
COL27A1-206ENST00000490831 PODXLO00592 558 aa16.58■□□□□ 0.24
COL27A1-206ENST00000490831 TRAPPC3O43617 180 aa16.58■□□□□ 0.24
COL27A1-206ENST00000490831 ALADP13716 330 aa16.58■□□□□ 0.24
COL27A1-206ENST00000490831 TNFSF9P41273 254 aa16.58■□□□□ 0.24
COL27A1-206ENST00000490831 MATR3P43243 847 aaKnown RBP eCLIP16.58■□□□□ 0.24
COL27A1-206ENST00000490831 POU5F1Q01860 360 aaKnown RBP16.58■□□□□ 0.24
COL27A1-206ENST00000490831 ALCAMQ13740 583 aa16.58■□□□□ 0.24
COL27A1-206ENST00000490831 ENOX2Q16206 610 aaKnown RBP16.58■□□□□ 0.24
COL27A1-206ENST00000490831 FOXD4L6Q3SYB3 417 aaPredicted RBP16.58■□□□□ 0.24
COL27A1-206ENST00000490831 HERC4Q5GLZ8 1057 aaPredicted RBP16.58■□□□□ 0.24
COL27A1-206ENST00000490831 ZBTB41Q5SVQ8 909 aa16.58■□□□□ 0.24
COL27A1-206ENST00000490831 RESP18Q5W5W9 173 aa16.58■□□□□ 0.24
COL27A1-206ENST00000490831 SLFN12LQ6IEE8 588 aa16.58■□□□□ 0.24
COL27A1-206ENST00000490831 PRSS55Q6UWB4 352 aaPredicted RBP16.58■□□□□ 0.24
COL27A1-206ENST00000490831 CYP26C1Q6V0L0 522 aa16.58■□□□□ 0.24
COL27A1-206ENST00000490831 FOXD4L3Q6VB84 417 aaPredicted RBP16.58■□□□□ 0.24
COL27A1-206ENST00000490831 GPR149Q86SP6 731 aa16.58■□□□□ 0.24
COL27A1-206ENST00000490831 RNF135Q8IUD6 432 aa16.58■□□□□ 0.24
COL27A1-206ENST00000490831 IQUBQ8NA54 791 aa16.58■□□□□ 0.24
COL27A1-206ENST00000490831 C18orf25Q96B23 403 aaPredicted RBP16.58■□□□□ 0.24
COL27A1-206ENST00000490831 CLSTN3Q9BQT9 956 aa16.58■□□□□ 0.24
COL27A1-206ENST00000490831 LRRC27Q9C0I9 530 aa16.58■□□□□ 0.24
COL27A1-206ENST00000490831 POMKQ9H5K3 350 aa16.58■□□□□ 0.24
COL27A1-206ENST00000490831 MRPL44Q9H9J2 332 aaKnown RBP16.58■□□□□ 0.24
COL27A1-206ENST00000490831 MAN1C1Q9NR34 630 aa16.58■□□□□ 0.24
COL27A1-206ENST00000490831 CDH22Q9UJ99 828 aa16.58■□□□□ 0.24
COL27A1-206ENST00000490831 CPSF3Q9UKF6 684 aaKnown RBP16.58■□□□□ 0.24
COL27A1-206ENST00000490831 MTCL1Q9Y4B5 1905 aaKnown RBP16.57■□□□□ 0.24
COL27A1-206ENST00000490831 TGM5O43548 720 aa16.57■□□□□ 0.24
COL27A1-206ENST00000490831 DCXO43602 365 aa16.57■□□□□ 0.24
COL27A1-206ENST00000490831 CYP3A5P20815 502 aa16.57■□□□□ 0.24
COL27A1-206ENST00000490831 LRPAP1P30533 357 aa16.57■□□□□ 0.24
COL27A1-206ENST00000490831 ME1P48163 572 aa16.57■□□□□ 0.24
COL27A1-206ENST00000490831 PSMD5Q16401 504 aa16.57■□□□□ 0.24
COL27A1-206ENST00000490831 ATAT1Q5SQI0 421 aa16.57■□□□□ 0.24
COL27A1-206ENST00000490831 L1TD1Q5T7N2 865 aaKnown RBP16.57■□□□□ 0.24
COL27A1-206ENST00000490831 KANK3Q6NY19 840 aa16.57■□□□□ 0.24
COL27A1-206ENST00000490831 ELMSAN1Q6PJG2 1045 aa16.57■□□□□ 0.24
COL27A1-206ENST00000490831 TMC5Q6UXY8 1006 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms