RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 DDIT3P35638 169 aa34.3■■■■□ 3.08
LDB1-204ENST00000490751 MATR3P43243 847 aaKnown RBP eCLIP34.3■■■■□ 3.08
LDB1-204ENST00000490751 PSMD5Q16401 504 aa34.3■■■■□ 3.08
LDB1-204ENST00000490751 UPP1Q16831 310 aa34.3■■■■□ 3.08
LDB1-204ENST00000490751 SEZ6Q53EL9 994 aa34.3■■■■□ 3.08
LDB1-204ENST00000490751 LNX1Q8TBB1 728 aaPredicted RBP34.3■■■■□ 3.08
LDB1-204ENST00000490751 HDAC7Q8WUI4 952 aa34.3■■■■□ 3.08
LDB1-204ENST00000490751 CNTN3Q9P232 1028 aa34.3■■■■□ 3.08
LDB1-204ENST00000490751 MEFVO15553 781 aaPredicted RBP34.29■■■■□ 3.08
LDB1-204ENST00000490751 RFPL2O75678 378 aa34.29■■■■□ 3.08
LDB1-204ENST00000490751 KCNE1P15382 129 aa34.29■■■■□ 3.08
LDB1-204ENST00000490751 MCL1Q07820 350 aa34.29■■■■□ 3.08
LDB1-204ENST00000490751 PDZRN4Q6ZMN7 1036 aaPredicted RBP34.29■■■■□ 3.08
LDB1-204ENST00000490751 CCDC149Q6ZUS6 474 aa34.29■■■■□ 3.08
LDB1-204ENST00000490751 C3orf58Q8NDZ4 430 aa34.29■■■■□ 3.08
LDB1-204ENST00000490751 PLEKHA4Q9H4M7 779 aa34.29■■■■□ 3.08
LDB1-204ENST00000490751 USTQ9Y2C2 406 aa34.29■■■■□ 3.08
LDB1-204ENST00000490751 CCDC195A0A1B0GUA6 201 aa34.28■■■■□ 3.08
LDB1-204ENST00000490751 TRAK2O60296 914 aa34.28■■■■□ 3.08
LDB1-204ENST00000490751 TXLNAP40222 546 aa34.28■■■■□ 3.08
LDB1-204ENST00000490751 LILRA6Q6PI73 481 aa34.28■■■■□ 3.08
LDB1-204ENST00000490751 CD300LGQ6UXG3 332 aa34.28■■■■□ 3.08
LDB1-204ENST00000490751 TRIM67Q6ZTA4 783 aa34.28■■■■□ 3.08
LDB1-204ENST00000490751 CLSTN3Q9BQT9 956 aa34.28■■■■□ 3.08
LDB1-204ENST00000490751 HAPLN2Q9GZV7 340 aa34.28■■■■□ 3.08
LDB1-204ENST00000490751 STK17AQ9UEE5 414 aa34.28■■■■□ 3.08
LDB1-204ENST00000490751 TBX20Q9UMR3 447 aa34.28■■■■□ 3.08
LDB1-204ENST00000490751 TRIOO75962 3097 aa34.28■■■■□ 3.08
LDB1-204ENST00000490751 LIG4P49917 911 aa34.27■■■■□ 3.08
LDB1-204ENST00000490751 SLC39A14Q15043 492 aa34.27■■■■□ 3.08
LDB1-204ENST00000490751 PDXDC1Q6P996 788 aa34.27■■■■□ 3.08
LDB1-204ENST00000490751 HFE2Q6ZVN8 426 aa34.27■■■■□ 3.08
LDB1-204ENST00000490751 HSCBQ8IWL3 235 aa34.27■■■■□ 3.08
LDB1-204ENST00000490751 DDX27Q96GQ7 796 aaKnown RBP34.27■■■■□ 3.08
LDB1-204ENST00000490751 GTF3C3Q9Y5Q9 886 aa34.27■■■■□ 3.08
LDB1-204ENST00000490751 MORC2Q9Y6X9 1032 aaPredicted RBP34.27■■■■□ 3.08
LDB1-204ENST00000490751 SCP2P22307 547 aa34.26■■■■□ 3.08
LDB1-204ENST00000490751 FGFR3P22607 806 aa34.26■■■■□ 3.08
LDB1-204ENST00000490751 BRCC3P46736 316 aa34.26■■■■□ 3.08
LDB1-204ENST00000490751 SLC10A6Q3KNW5 377 aa34.26■■■■□ 3.08
LDB1-204ENST00000490751 ZDHHC14Q8IZN3 488 aa34.26■■■■□ 3.08
LDB1-204ENST00000490751 KREMEN2Q8NCW0 462 aa34.26■■■■□ 3.08
LDB1-204ENST00000490751 PODXLO00592 558 aa34.25■■■■□ 3.07
LDB1-204ENST00000490751 HNRNPDLO14979 420 aaKnown RBP34.25■■■■□ 3.07
LDB1-204ENST00000490751 RRAGBQ5VZM2 374 aa34.25■■■■□ 3.07
LDB1-204ENST00000490751 CYP26C1Q6V0L0 522 aa34.25■■■■□ 3.07
LDB1-204ENST00000490751 PLCD3Q8N3E9 789 aa34.25■■■■□ 3.07
LDB1-204ENST00000490751 KRI1Q8N9T8 703 aaKnown RBP34.25■■■■□ 3.07
LDB1-204ENST00000490751 C18orf25Q96B23 403 aaPredicted RBP34.25■■■■□ 3.07
LDB1-204ENST00000490751 FIZ1Q96SL8 496 aa34.25■■■■□ 3.07
LDB1-204ENST00000490751 RHOBTB2Q9BYZ6 727 aa34.25■■■■□ 3.07
LDB1-204ENST00000490751 MYO10Q9HD67 2058 aa34.25■■■■□ 3.07
LDB1-204ENST00000490751 TMEM221A6NGB7 291 aa34.24■■■■□ 3.07
LDB1-204ENST00000490751 I3L4J1 428 aa34.24■■■■□ 3.07
LDB1-204ENST00000490751 M0R296 226 aa34.24■■■■□ 3.07
LDB1-204ENST00000490751 TRAPPC3O43617 180 aa34.24■■■■□ 3.07
LDB1-204ENST00000490751 PIGRP01833 764 aa34.24■■■■□ 3.07
LDB1-204ENST00000490751 CXCL8P10145 99 aa34.24■■■■□ 3.07
LDB1-204ENST00000490751 NMT1P30419 496 aaKnown RBP34.24■■■■□ 3.07
LDB1-204ENST00000490751 SIGLEC14Q08ET2 396 aa34.24■■■■□ 3.07
LDB1-204ENST00000490751 SMG7Q92540 1137 aaKnown RBP34.24■■■■□ 3.07
LDB1-204ENST00000490751 ZNF707Q96C28 371 aaPredicted RBP34.24■■■■□ 3.07
LDB1-204ENST00000490751 ACSF2Q96CM8 615 aaPredicted RBP34.24■■■■□ 3.07
LDB1-204ENST00000490751 ZDHHC7Q9NXF8 308 aa34.24■■■■□ 3.07
LDB1-204ENST00000490751 FBXW11Q9UKB1 542 aa34.24■■■■□ 3.07
LDB1-204ENST00000490751 ADAM12O43184 909 aa34.23■■■■□ 3.07
LDB1-204ENST00000490751 TKTP29401 623 aaKnown RBP34.23■■■■□ 3.07
LDB1-204ENST00000490751 NASPP49321 788 aaPredicted RBP34.23■■■■□ 3.07
LDB1-204ENST00000490751 OTOP3Q7RTS5 596 aa34.23■■■■□ 3.07
LDB1-204ENST00000490751 DYMQ7RTS9 669 aa34.23■■■■□ 3.07
LDB1-204ENST00000490751 MTRRQ9UBK8 725 aa34.23■■■■□ 3.07
LDB1-204ENST00000490751 PAPLNO95428 1278 aa34.22■■■■□ 3.07
LDB1-204ENST00000490751 CLTAP09496 248 aa34.22■■■■□ 3.07
LDB1-204ENST00000490751 STK38Q15208 465 aa34.22■■■■□ 3.07
LDB1-204ENST00000490751 WDR6Q9NNW5 1121 aaKnown RBP34.22■■■■□ 3.07
LDB1-204ENST00000490751 LIMD1Q9UGP4 676 aa34.22■■■■□ 3.07
LDB1-204ENST00000490751 SORCS3Q9UPU3 1222 aa34.22■■■■□ 3.07
LDB1-204ENST00000490751 ZMYND10O75800 440 aa34.21■■■■□ 3.07
LDB1-204ENST00000490751 ASGR2P07307 311 aa34.21■■■■□ 3.07
LDB1-204ENST00000490751 RPL9P32969 192 aaKnown RBP34.21■■■■□ 3.07
LDB1-204ENST00000490751 TNFSF9P41273 254 aa34.21■■■■□ 3.07
LDB1-204ENST00000490751 GTF2BQ00403 316 aa34.21■■■■□ 3.07
LDB1-204ENST00000490751 MAP4K3Q8IVH8 894 aa34.21■■■■□ 3.07
LDB1-204ENST00000490751 PIDD1Q9HB75 910 aa34.21■■■■□ 3.07
LDB1-204ENST00000490751 CLUHO75153 1309 aa34.21■■■■□ 3.07
LDB1-204ENST00000490751 HSP90AA1P07900 732 aaKnown RBP34.2■■■■□ 3.07
LDB1-204ENST00000490751 ABCD1P33897 745 aa34.2■■■■□ 3.07
LDB1-204ENST00000490751 MTMR3Q13615 1198 aa34.2■■■■□ 3.07
LDB1-204ENST00000490751 CCDC73Q6ZRK6 1079 aa34.2■■■■□ 3.07
LDB1-204ENST00000490751 SV2BQ7L1I2 683 aa34.2■■■■□ 3.07
LDB1-204ENST00000490751 BMP8AQ7Z5Y6 402 aa34.2■■■■□ 3.07
LDB1-204ENST00000490751 DDX12PQ92771 950 aa34.2■■■■□ 3.07
LDB1-204ENST00000490751 MFSD14AQ96MC6 490 aa34.2■■■■□ 3.07
LDB1-204ENST00000490751 PRKD2Q9BZL6 878 aa34.2■■■■□ 3.07
LDB1-204ENST00000490751 PLEKHA5Q9HAU0 1116 aa34.2■■■■□ 3.07
LDB1-204ENST00000490751 TUBGCP4Q9UGJ1 667 aa34.2■■■■□ 3.07
LDB1-204ENST00000490751 NUB1Q9Y5A7 615 aa34.2■■■■□ 3.07
LDB1-204ENST00000490751 TTC26A0AVF1 554 aa34.19■■■■□ 3.06
LDB1-204ENST00000490751 MYMKA6NI61 221 aa34.19■■■■□ 3.06
LDB1-204ENST00000490751 OGTO15294 1046 aa34.19■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms